Ecosyste.ms: Issues

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GitHub / fredjaya/topofind issues and pull requests

#18 - sh argument list too long at t=8

Issue - State: closed - Opened by fredjaya almost 2 years ago

#18 - sh argument list too long at t=8

Issue - State: closed - Opened by fredjaya almost 2 years ago

#17 - BIC format error after t=5 mast runs

Issue - State: closed - Opened by fredjaya almost 2 years ago - 1 comment

#17 - BIC format error after t=5 mast runs

Issue - State: closed - Opened by fredjaya almost 2 years ago - 1 comment

#15 - Speed up program

Issue - State: closed - Opened by fredjaya about 2 years ago - 1 comment

#15 - Speed up program

Issue - State: closed - Opened by fredjaya about 2 years ago - 1 comment

#14 - Account for duplicate topologies

Issue - State: closed - Opened by fredjaya about 2 years ago

#14 - Account for duplicate topologies

Issue - State: closed - Opened by fredjaya about 2 years ago

#13 - Add scripts to process HMMSTER outputs

Issue - State: closed - Opened by fredjaya about 2 years ago
Labels: low priority

#13 - Add scripts to process HMMSTER outputs

Issue - State: closed - Opened by fredjaya about 2 years ago
Labels: low priority

#12 - Replace MixtureModelHMM with HMMSTER

Issue - State: closed - Opened by fredjaya about 2 years ago
Labels: low priority

#12 - Replace MixtureModelHMM with HMMSTER

Issue - State: closed - Opened by fredjaya about 2 years ago
Labels: low priority

#11 - Test that multiple trees fit data better than one tree

Issue - State: closed - Opened by fredjaya about 2 years ago - 1 comment

#11 - Test that multiple trees fit data better than one tree

Issue - State: closed - Opened by fredjaya about 2 years ago - 1 comment

#10 - Remake trees using MAST-assigned partitions instead of +R2 assignments

Issue - State: closed - Opened by fredjaya over 2 years ago - 1 comment

#10 - Remake trees using MAST-assigned partitions instead of +R2 assignments

Issue - State: closed - Opened by fredjaya over 2 years ago - 1 comment

#8 - give useful names for output files and iterations

Issue - State: closed - Opened by fredjaya over 2 years ago - 2 comments

#8 - give useful names for output files and iterations

Issue - State: closed - Opened by fredjaya over 2 years ago - 2 comments

#7 - second iteration of t1_r2 on split blocks overwrites the initial t1_r2 run

Issue - State: closed - Opened by fredjaya over 2 years ago - 1 comment
Labels: important

#7 - second iteration of t1_r2 on split blocks overwrites the initial t1_r2 run

Issue - State: closed - Opened by fredjaya over 2 years ago - 1 comment
Labels: important

#6 - Add catch for n trees before second mast iteration

Issue - State: closed - Opened by fredjaya over 2 years ago

#4 - Output report

Issue - State: closed - Opened by fredjaya over 2 years ago - 1 comment
Labels: low priority

#2 - Use `val params.aln_path` for the output prefix

Issue - State: closed - Opened by fredjaya over 2 years ago

#1 - package ‘MixtureModelHMM’ is not available for this version of R

Issue - State: closed - Opened by liamxg over 2 years ago - 3 comments