Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / fredhutch/shiny-cromwell issues and pull requests

#85 - Differing numbers of rows error

Issue - State: closed - Opened by sckott 10 months ago - 4 comments
Labels: bug, medium priority, v1.1, shiny

#84 - Add button to clear Singularity Cache?

Issue - State: closed - Opened by tefirman 10 months ago - 3 comments
Labels: wontfix

#83 - add info on what the acronym means

Issue - State: open - Opened by jayoung 11 months ago - 3 comments
Labels: low priority, v1.2

#82 - Abbreviate column values in Job List table when too long

Issue - State: closed - Opened by sckott 11 months ago

#81 - Add proofr to welcome page

Issue - State: closed - Opened by sckott 11 months ago - 1 comment

#80 - Add PROOF server start date

Issue - State: closed - Opened by sitapriyamoorthi 11 months ago - 9 comments

#79 - add google analytics

Issue - State: closed - Opened by sckott 11 months ago

#78 - workflow options snake_case to camelCase

Issue - State: closed - Opened by sckott 12 months ago
Labels: bug

#77 - Add new how to and WDL training material links

Issue - State: closed - Opened by vortexing 12 months ago - 1 comment

#76 - Refreshed app done for now

Pull Request - State: closed - Opened by sckott 12 months ago

#75 - Polling on servers page: minimize checks

Issue - State: closed - Opened by sckott 12 months ago - 2 comments

#74 - Add tests

Issue - State: open - Opened by sckott 12 months ago
Labels: low priority, v1.3

#73 - PROOF specific text in app - makes it harder for reuse outside of the hutch

Issue - State: open - Opened by sckott 12 months ago - 1 comment
Labels: low priority, v2.0

#72 - PROOF Server tab prettify?

Issue - State: closed - Opened by sckott 12 months ago - 2 comments
Labels: investigating

#71 - Fall back to old git code if gitlab env vars dont work

Issue - State: closed - Opened by sckott 12 months ago - 1 comment

#70 - Abort a workflow : autopopulates with user id

Issue - State: closed - Opened by sitapriyamoorthi 12 months ago - 9 comments
Labels: wontfix

#69 - Validate works only if you re-login to PROOF

Issue - State: closed - Opened by sitapriyamoorthi 12 months ago - 1 comment

#68 - Move abort workflow into the Tracking tab?

Issue - State: open - Opened by sckott 12 months ago - 3 comments
Labels: low priority, v2.0

#67 - Buttons be buggy

Issue - State: closed - Opened by sckott 12 months ago
Labels: blocking

#66 - some totally optional suggestions for UI tweaks.

Pull Request - State: closed - Opened by vortexing 12 months ago - 1 comment

#65 - Nice to have: Dashboard showing aborted workflows

Issue - State: closed - Opened by sitapriyamoorthi 12 months ago - 4 comments
Labels: wontfix

#64 - Track Jobs: Workflow name not getting repopulates in Workflow Description table

Issue - State: closed - Opened by sitapriyamoorthi 12 months ago - 3 comments
Labels: bug

#63 - Track Jobs (and others): Improving the visualization of table header titles

Issue - State: open - Opened by sitapriyamoorthi 12 months ago - 3 comments
Labels: low priority, shiny, v1.2

#62 - Drag/drop file upload does not lint file content types

Issue - State: open - Opened by sckott 12 months ago - 2 comments
Labels: bug, low priority, shiny, v1.3

#61 - Change info in help dropdown

Issue - State: closed - Opened by sckott 12 months ago

#60 - Put all dates in tables in PT time zone

Issue - State: closed - Opened by sckott 12 months ago

#59 - Error with call caching table in tracking tab

Issue - State: closed - Opened by sckott 12 months ago
Labels: bug

#58 - Test packages are installed

Pull Request - State: closed - Opened by dtenenba 12 months ago - 5 comments

#57 - Tooltip for copy buttons is no working

Issue - State: open - Opened by sckott 12 months ago - 1 comment
Labels: bug, low priority, shiny, v1.3

#55 - Recognition of Server Immediately After Server Creation

Issue - State: closed - Opened by tefirman 12 months ago - 1 comment

#54 - Can launch two cromwell servers

Issue - State: closed - Opened by sitapriyamoorthi 12 months ago - 4 comments
Labels: wontfix

#51 - Workflow timing not showing

Issue - State: closed - Opened by sitapriyamoorthi 12 months ago - 3 comments

#50 - Page refresh and re-login after starting server

Issue - State: closed - Opened by sitapriyamoorthi 12 months ago - 4 comments

#49 - Replace shinydashboard with bslib

Issue - State: open - Opened by sckott 12 months ago - 3 comments
Labels: medium priority, shiny, v1.2

#48 - Tweak server text

Issue - State: closed - Opened by sckott 12 months ago
Labels: done

#47 - Fix status metadata singularity cache dir

Issue - State: closed - Opened by sckott almost 1 year ago
Labels: done

#46 - show link to source code and latest sha

Issue - State: closed - Opened by sckott almost 1 year ago
Labels: done

#45 - Abort and trouble buttons and their reset buttons are doing funny things

Issue - State: closed - Opened by sckott almost 1 year ago - 1 comment

#44 - Singularity cache not created upon job submission

Issue - State: closed - Opened by tefirman about 1 year ago - 3 comments

#43 - Change Start server button to wait for green status

Issue - State: closed - Opened by sckott about 1 year ago - 1 comment
Labels: done

#42 - Use multi-stage builds in Dockerfile

Issue - State: open - Opened by sckott about 1 year ago - 2 comments
Labels: low priority, v2.0

#41 - Switch between "Fred Hutch Cromwell" and FH Logo in header title?

Issue - State: closed - Opened by tefirman about 1 year ago - 2 comments
Labels: done

#40 - Able to use other users' Cromwell Servers

Issue - State: closed - Opened by tefirman about 1 year ago - 3 comments
Labels: bug

#39 - Possibly pin/freeze package versions?

Issue - State: open - Opened by sckott about 1 year ago - 5 comments
Labels: low priority, v2.0, shiny

#38 - Dev app: log in and server not up issues

Issue - State: closed - Opened by sckott about 1 year ago - 6 comments
Labels: blocking

#37 - Dev app on scicomp infra is sluggish

Issue - State: closed - Opened by sckott about 1 year ago - 1 comment

#36 - Dev app: start and delete buttons on cromwell page disabled

Issue - State: closed - Opened by sckott about 1 year ago - 2 comments

#35 - Give help in login modal

Issue - State: closed - Opened by sckott about 1 year ago - 2 comments
Labels: done

#34 - Clean up imported packages

Issue - State: closed - Opened by sckott about 1 year ago - 2 comments

#33 - Lilkely need to use session$reload somewhere

Issue - State: closed - Opened by sckott about 1 year ago

#32 - Access logs for prod and dev app

Issue - State: closed - Opened by sckott about 1 year ago - 2 comments
Labels: devops, high priority

#31 - Possible permissions errors

Issue - State: closed - Opened by sckott about 1 year ago - 1 comment
Labels: devops

#30 - Fix make pkg_deps target to account for non-cran pkgs

Issue - State: closed - Opened by sckott about 1 year ago - 1 comment
Labels: done

#29 - Make sure user data is not shared across all users

Issue - State: closed - Opened by sckott about 1 year ago - 2 comments
Labels: done

#28 - Check workflow ID inputs wherever they are taken as inputs

Issue - State: closed - Opened by sckott about 1 year ago - 1 comment
Labels: done

#27 - Development version of the app

Pull Request - State: closed - Opened by sckott about 1 year ago

#26 - Dev version of the app on branch `dev`

Pull Request - State: closed - Opened by sckott about 1 year ago

#25 - Allow for Enter to do a button click on modals

Issue - State: closed - Opened by sckott about 1 year ago
Labels: done

#24 - Document server up time of 7 days

Issue - State: closed - Opened by sckott about 1 year ago - 1 comment

#23 - Add slurm_account param in proof start flow

Issue - State: closed - Opened by sckott about 1 year ago - 1 comment
Labels: done

#22 - For FH users, allow for PROOF flow and non PROOF flow?

Issue - State: closed - Opened by sckott about 1 year ago - 3 comments

#21 - Proof Login/logout

Issue - State: closed - Opened by sckott about 1 year ago - 4 comments

#20 - Improve error handling

Issue - State: closed - Opened by sckott about 1 year ago - 4 comments
Labels: done

#19 - Track Jobs on tracks activities of jobs submitted in "x" days

Issue - State: closed - Opened by sitapriyamoorthi about 1 year ago - 2 comments
Labels: wontfix

#18 - Split validate and submit tabs

Issue - State: closed - Opened by sitapriyamoorthi about 1 year ago - 4 comments
Labels: done

#17 - Make shiny app as general as possible to facilitate reuse/forking

Issue - State: open - Opened by sckott about 1 year ago - 4 comments
Labels: low priority, v2.0, shiny

#16 - Make connected to DIY server button clear

Issue - State: closed - Opened by sckott about 1 year ago - 2 comments
Labels: done

#15 - Modularize code?

Issue - State: closed - Opened by sckott about 1 year ago - 3 comments
Labels: low priority

#14 - Validate output changes?

Issue - State: closed - Opened by sckott about 1 year ago - 3 comments
Labels: wontfix

#13 - Email notifications?

Issue - State: closed - Opened by sckott about 1 year ago - 5 comments
Labels: wontfix

#12 - Copy to clipboard?

Issue - State: closed - Opened by sckott about 1 year ago - 2 comments
Labels: done

#11 - Validate multiple JSON files

Issue - State: open - Opened by sckott about 1 year ago - 6 comments
Labels: low priority, v2.0

#10 - 'submit jobs' tab - clear previous inputs

Issue - State: closed - Opened by jayoung about 2 years ago - 6 comments
Labels: done

#9 - 'submit jobs' tab - add visual clarity for output of validate/troubleshoot

Issue - State: closed - Opened by jayoung about 2 years ago - 2 comments
Labels: done

#8 - Add pre-check for active server connection

Issue - State: closed - Opened by jayoung about 2 years ago - 1 comment
Labels: done

#7 - Add ability to download a json of the outputs not only a TSV

Issue - State: closed - Opened by vortexing almost 3 years ago - 1 comment
Labels: wontfix

#6 - Add ability to see subworkflows (not just nested scatters)

Issue - State: closed - Opened by vortexing almost 3 years ago - 2 comments
Labels: wontfix

#5 - Add ability to upload zip of dependencies to app

Issue - State: closed - Opened by vortexing almost 3 years ago - 2 comments
Labels: wontfix

#4 - No call caching results shown when nested scatters in workflow

Issue - State: closed - Opened by vortexing about 3 years ago - 2 comments
Labels: wontfix

#3 - Error in tables when there are no jobs in the last x days

Issue - State: closed - Opened by vortexing over 4 years ago

#2 - move stuff to the sidebar to clean up app space

Pull Request - State: closed - Opened by vortexing over 4 years ago

#1 - Add a check for server connectivity first

Issue - State: closed - Opened by vortexing over 4 years ago