Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / fredhutch/shiny-cromwell issues and pull requests

#192 - Implement tickle server idea from main branch

Issue - State: open - Opened by sckott 3 months ago

#190 - server not up in main

Issue - State: closed - Opened by sckott 3 months ago
Labels: bug

#188 - Dev UI: Why are the jobs in Workflow Details -> Job List clickable?

Issue - State: open - Opened by sitapriyamoorthi 3 months ago - 2 comments
Labels: v1.2

#187 - Dev UI: email update

Issue - State: open - Opened by sitapriyamoorthi 3 months ago - 4 comments

#186 - Dev Ui: What are the units of time?

Issue - State: open - Opened by sitapriyamoorthi 3 months ago - 2 comments
Labels: v1.2

#185 - Dev UI: Links in To get started broken

Issue - State: closed - Opened by sitapriyamoorthi 3 months ago - 3 comments
Labels: v1.2

#184 - Dev UI: Add a link on the top bar to report issues

Issue - State: open - Opened by sitapriyamoorthi 3 months ago - 3 comments
Labels: v1.2

#183 - Dev UI: Help page

Issue - State: open - Opened by sitapriyamoorthi 3 months ago - 2 comments
Labels: v1.2

#182 - Dev UI: Troubleshoot page gets populate for running workflows

Issue - State: open - Opened by sitapriyamoorthi 3 months ago - 1 comment

#180 - Dev UI: Date does not auto-populate to todays date

Issue - State: open - Opened by sitapriyamoorthi 3 months ago - 1 comment
Labels: v1.2

#179 - Dev UI - Incorrect server not up error

Issue - State: open - Opened by sitapriyamoorthi 3 months ago - 2 comments

#178 - Dev UI: Server starting slow -> error->restart issues

Issue - State: open - Opened by sitapriyamoorthi 3 months ago - 1 comment

#177 - Dev UI: Slow log-in

Issue - State: open - Opened by sitapriyamoorthi 3 months ago - 2 comments

#176 - Dev UI: Wont let me delete my server

Issue - State: closed - Opened by sitapriyamoorthi 3 months ago - 4 comments
Labels: v1.2

#175 - General filtering approach for track workflows page

Issue - State: open - Opened by sckott 3 months ago
Labels: later

#174 - Date sorting now works

Pull Request - State: closed - Opened by sckott 3 months ago - 2 comments
Labels: v1.2

#173 - Date sorting doesn't actually work

Issue - State: open - Opened by sckott 3 months ago
Labels: bug, high priority, v1.2

#172 - Avoid using renderUI, as it is slow

Issue - State: open - Opened by sckott 3 months ago
Labels: later, low priority

#171 - clear/reset ui outputs in workflow details page

Pull Request - State: closed - Opened by sckott 3 months ago - 2 comments
Labels: v1.2

#170 - Add button to jobs list tab to update job list

Pull Request - State: closed - Opened by sckott 3 months ago - 2 comments
Labels: v1.2

#169 - Bits bobs added back in

Pull Request - State: closed - Opened by sckott 3 months ago - 2 comments
Labels: v1.2

#168 - Point dockerized shiny app at different instances of the API

Pull Request - State: open - Opened by dtenenba 3 months ago - 1 comment

#167 - Add copy icon to copy workflow id on each card on track workflows page

Issue - State: open - Opened by sckott 3 months ago
Labels: later

#165 - Dev UI: No way to update the Job List

Issue - State: open - Opened by sckott 4 months ago - 1 comment
Labels: high priority, v1.2

#164 - Clear workflow details outputs before the app switches to the details tab

Issue - State: open - Opened by sckott 4 months ago - 1 comment
Labels: high priority, v1.2

#163 - shiny-cromwell v1.2.0 Updates

Pull Request - State: open - Opened by tefirman 4 months ago - 4 comments

#162 - UI changes based on sonu user studies

Pull Request - State: closed - Opened by sckott 4 months ago - 1 comment

#161 - Fix filtering problems

Pull Request - State: closed - Opened by sckott 4 months ago

#160 - Workflow details page updates

Issue - State: open - Opened by codebeaker 4 months ago - 2 comments
Labels: v1.2

#159 - Updates to Track Workflows page

Issue - State: open - Opened by codebeaker 4 months ago - 2 comments
Labels: v1.2

#158 - Submit page changes

Issue - State: open - Opened by codebeaker 4 months ago - 5 comments
Labels: v1.2

#157 - Updates to server page

Issue - State: open - Opened by codebeaker 4 months ago - 2 comments
Labels: v1.2

#156 - Update Resources/Help content

Issue - State: open - Opened by codebeaker 4 months ago - 2 comments
Labels: v1.2

#155 - update text on the landing page

Issue - State: open - Opened by codebeaker 4 months ago - 2 comments
Labels: v1.2

#154 - update header with Fred Hutch branding

Issue - State: open - Opened by codebeaker 4 months ago - 2 comments
Labels: v1.2

#153 - Local Instance Troubles

Issue - State: closed - Opened by tefirman 4 months ago - 2 comments
Labels: investigating

#152 - Is this an expected behavior: Logged in on hitting refresh

Issue - State: open - Opened by sitapriyamoorthi 4 months ago - 6 comments
Labels: investigating

#151 - Download PDF from WDL viewer tab

Issue - State: open - Opened by sckott 4 months ago - 5 comments
Labels: enhancement, low priority, v1.2

#150 - WDL Viewer not displaying the WDL

Issue - State: closed - Opened by sitapriyamoorthi 4 months ago - 8 comments

#149 - old cold clean up

Pull Request - State: closed - Opened by sckott 4 months ago - 1 comment

#148 - Filtering workflow name improvements and addition of labels filtering

Pull Request - State: closed - Opened by sckott 4 months ago - 7 comments

#147 - Mock up revisions to track workflows screen in figma

Issue - State: open - Opened by codebeaker 4 months ago - 5 comments
Labels: medium priority, v1.2

#146 - Clean out old code

Issue - State: open - Opened by sckott 4 months ago - 1 comment
Labels: medium priority, v1.2

#145 - Error messages when user is not logged in

Issue - State: open - Opened by sckott 4 months ago
Labels: low priority, v1.2

#144 - Add bits and bobs back in before merging bslib to main

Issue - State: open - Opened by sckott 4 months ago
Labels: medium priority, v1.2

#143 - R 44 test

Pull Request - State: closed - Opened by tefirman 4 months ago

#142 - Improve validate tab

Issue - State: open - Opened by sckott 5 months ago - 3 comments
Labels: investigating

#141 - Submit page: pre-fill workflow labels with random phrases?

Issue - State: open - Opened by sckott 5 months ago - 2 comments
Labels: v1.2

#140 - Tracking page: make status count buttons clickable to filter results?

Issue - State: closed - Opened by sckott 5 months ago - 3 comments
Labels: low priority, v1.2

#139 - Submit page: provide example files?

Issue - State: open - Opened by sckott 5 months ago - 4 comments
Labels: low priority, v1.2

#138 - Submit page: grey out submit button until conditions met

Issue - State: open - Opened by sckott 5 months ago - 2 comments
Labels: medium priority, v1.2

#137 - Shiny autoreload does not work in at least some contexts

Issue - State: open - Opened by sckott 5 months ago
Labels: investigating

#136 - Walkthrough/tour of the app?

Issue - State: open - Opened by sckott 5 months ago - 2 comments
Labels: medium priority, v1.2

#135 - Notifications in the app?

Issue - State: open - Opened by sckott 5 months ago - 4 comments
Labels: low priority, v2.0

#134 - Upping the versions of proofr and rcromwell

Pull Request - State: closed - Opened by tefirman 5 months ago

#133 - shiny-cromwell v1.1.0 Updates

Pull Request - State: closed - Opened by tefirman 5 months ago

#132 - DIY Cromwell button reappearing

Issue - State: open - Opened by sckott 5 months ago
Labels: low priority, v1.2

#131 - Change copy button to copy workflow id on click?

Issue - State: closed - Opened by sckott 6 months ago - 4 comments
Labels: enhancement, investigating

#130 - Use cookies to store user login data

Pull Request - State: closed - Opened by sckott 6 months ago - 12 comments

#129 - Change over shiny app framework to bslib?

Pull Request - State: closed - Opened by sckott 6 months ago - 3 comments

#128 - Change from emailing to opening an issue in help dropdown

Pull Request - State: closed - Opened by sckott 6 months ago

#127 - Reference input files from previous PROOF runs

Issue - State: open - Opened by Sanaz01 6 months ago - 2 comments
Labels: investigating

#126 - Prepare script before copying input files

Issue - State: open - Opened by Sanaz01 6 months ago - 4 comments
Labels: investigating

#125 - add capability to convert wdl to mermaid

Pull Request - State: closed - Opened by dtenenba 6 months ago - 13 comments

#124 - new make command to run a remote branch via a prebuilt docker image

Pull Request - State: closed - Opened by sckott 6 months ago - 2 comments

#123 - Maybe move workflow specific job details to a new page in the app?

Issue - State: open - Opened by sckott 6 months ago - 7 comments
Labels: enhancement, medium priority, v1.2

#122 - Visualize WDLs in the app

Issue - State: closed - Opened by sckott 6 months ago - 1 comment
Labels: enhancement, medium priority, v1.1

#121 - User isn't told if they can submit github issues in app

Issue - State: closed - Opened by vortexing 6 months ago - 5 comments
Labels: good first issue, low priority, v1.1

#120 - Possible option to view inputs and fix a bug

Pull Request - State: closed - Opened by sckott 6 months ago - 16 comments

#119 - Server up but, validate tab says its not

Issue - State: open - Opened by sitapriyamoorthi 6 months ago - 8 comments
Labels: investigating

#118 - Persist User Login with Cookies

Issue - State: closed - Opened by tefirman 7 months ago - 2 comments
Labels: medium priority, v1.1, shiny

#117 - Add labels to runs table and move to left

Pull Request - State: closed - Opened by sckott 7 months ago - 3 comments

#116 - Automate stress tests

Issue - State: open - Opened by tefirman 7 months ago
Labels: low priority, v2.0

#115 - Visualization of WDL workflow (as a workflow diagram)

Issue - State: closed - Opened by sitapriyamoorthi 7 months ago - 4 comments
Labels: enhancement, low priority, v1.1

#114 - app says "Your server is not up" when it is

Issue - State: open - Opened by dtenenba 7 months ago - 1 comment
Labels: low priority, shiny, v1.3

#113 - Long delays during server creation

Issue - State: open - Opened by tefirman 7 months ago
Labels: low priority, v1.3

#112 - Allow for partial match in workflow name search

Issue - State: open - Opened by tefirman 7 months ago - 3 comments
Labels: medium priority, shiny, v1.2

#111 - App greys out

Issue - State: open - Opened by sckott 7 months ago - 5 comments
Labels: high priority, shiny, v1.2

#109 - workflow inputs sometimes shows error

Issue - State: closed - Opened by jayoung 8 months ago - 3 comments
Labels: bug, medium priority, v1.1, shiny

#108 - small suggestions for "track jobs" tab

Issue - State: open - Opened by jayoung 8 months ago - 1 comment
Labels: enhancement, low priority, shiny, v1.3

#106 - no workflow labels in table

Issue - State: closed - Opened by vortexing 9 months ago - 5 comments
Labels: medium priority, v1.1

#100 - Resolving "add replicas - emergency push" back into dev

Pull Request - State: closed - Opened by tefirman 9 months ago

#99 - Update README.md

Pull Request - State: closed - Opened by tefirman 9 months ago

#98 - file uploads having a strange issue

Issue - State: closed - Opened by vortexing 9 months ago - 2 comments

#97 - Loaded without it's guts

Issue - State: closed - Opened by vortexing 9 months ago - 6 comments
Labels: bug, wontfix

#96 - need to stress test

Issue - State: closed - Opened by dtenenba 9 months ago - 2 comments

#95 - Adding links to PROOF documentation on the Welcome tab

Pull Request - State: closed - Opened by tefirman 9 months ago

#94 - Download Troubleshoot output

Issue - State: open - Opened by Sanaz01 9 months ago - 4 comments
Labels: medium priority, v1.3

#93 - starting to add proof server start datetime

Pull Request - State: closed - Opened by seankross 9 months ago - 1 comment

#92 - Update README.md

Pull Request - State: closed - Opened by seankross 9 months ago - 1 comment

#91 - dev branch can point to dev api

Pull Request - State: closed - Opened by dtenenba 10 months ago - 1 comment

#90 - ability to point to different API servers (for development)

Issue - State: closed - Opened by dtenenba 10 months ago - 1 comment

#89 - unnecessary polling?

Issue - State: closed - Opened by dtenenba 10 months ago - 6 comments
Labels: investigating

#88 - Need to link the shiny app proof process to proof-api releases

Issue - State: closed - Opened by vortexing 10 months ago - 1 comment

#87 - Need GPU accessible on PROOF

Issue - State: closed - Opened by Sanaz01 10 months ago - 1 comment

#86 - Proof server - readiness test

Issue - State: closed - Opened by vortexing 10 months ago - 2 comments