Ecosyste.ms: Issues

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GitHub / fractal-analytics-platform/fractal-server issues and pull requests

#1353 - Fix obsolete `image.dict()` in runner

Pull Request - State: closed - Opened by tcompa 7 months ago - 1 comment

#1352 - Use `flag_modified` and remove useless `db.commit`

Pull Request - State: closed - Opened by ychiucco 7 months ago - 1 comment

#1351 - Test rate limit

Pull Request - State: closed - Opened by ychiucco 7 months ago - 1 comment

#1350 - Workflow import/export API

Pull Request - State: closed - Opened by ychiucco 7 months ago - 1 comment

#1349 - Rename image `path(s)` into `zarr_url(s)`

Pull Request - State: closed - Opened by tcompa 7 months ago - 1 comment

#1348 - Rename image `path(s)` into `zarr_url(s)`

Issue - State: closed - Opened by tcompa 7 months ago
Labels: v2

#1347 - Update `fractal_server/app/schemas/json_schemas` to handle both v1 and v2

Issue - State: closed - Opened by tcompa 7 months ago - 2 comments
Labels: task collection, v2

#1346 - Runner error related to local-backend configuration

Issue - State: closed - Opened by tcompa 7 months ago
Labels: bug, v2

#1345 - Test Task-collection meta propagation

Pull Request - State: closed - Opened by ychiucco 7 months ago - 1 comment

#1344 - Re-enable get admin-v2 Project

Pull Request - State: closed - Opened by ychiucco 7 months ago - 1 comment

#1343 - Re-enable `GET /admin/v2/project/`

Issue - State: closed - Opened by tcompa 7 months ago
Labels: API, v2

#1342 - 500 internal error, when collecting the same task package `fractal-tasks-core` twice from v1 and v2

Issue - State: closed - Opened by tcompa 7 months ago - 1 comment
Labels: bug, task collection, v2

#1341 - Review use of `Filters` casting within PATCH-WorkflowTaskV2 endpoint

Issue - State: closed - Opened by tcompa 8 months ago - 1 comment
Labels: API, v2

#1340 - Merge "V2 Submit Job" API tag with "V2 Job"

Issue - State: closed - Opened by tcompa 8 months ago
Labels: API

#1339 - Patch `WorkflowTaskV2.input_filters`

Pull Request - State: closed - Opened by ychiucco 8 months ago - 1 comment

#1338 - Unique v2 migration, without batch operations

Pull Request - State: closed - Opened by ychiucco 8 months ago - 1 comment

#1337 - Reintroduce dataset-status tests

Pull Request - State: closed - Opened by ychiucco 8 months ago - 1 comment

#1336 - Re-include `input_filters` in PATCH WorkflowTask V2

Issue - State: closed - Opened by tcompa 8 months ago
Labels: API, v2

#1333 - Add new mock tasks

Pull Request - State: closed - Opened by tcompa 8 months ago - 1 comment

#1331 - Always forbid extras in create pydantic models

Pull Request - State: closed - Opened by ychiucco 8 months ago - 1 comment

#1330 - 1329 do not re export app.schemas.v1 from app.models

Pull Request - State: closed - Opened by tcompa 8 months ago - 1 comment

#1329 - Do not re-export app.schemas.v1 from app.models

Issue - State: closed - Opened by tcompa 8 months ago
Labels: v2

#1328 - Support including/running a V1 task within a V2 WorkflowTask

Issue - State: closed - Opened by tcompa 8 months ago - 2 comments
Labels: v2

#1326 - Add specific mock tasks and the corresponding tests

Issue - State: closed - Opened by tcompa 8 months ago
Labels: testing, v2

#1325 - Test propagation of `meta_parallel` and/or `meta_non_parallel` within task collection

Issue - State: closed - Opened by tcompa 8 months ago
Labels: testing, task collection, v2

#1324 - Re-introduce tests for dataset-status endpoint

Issue - State: closed - Opened by tcompa 8 months ago - 1 comment
Labels: testing, API, v2

#1323 - Always forbid extras in Create Pydantic models

Issue - State: closed - Opened by tcompa 8 months ago
Labels: API, v2

#1322 - Remove useless `db.add` or `db.merge` from PATCH endpoints

Issue - State: closed - Opened by tcompa 8 months ago
Labels: API, v2

#1321 - Re-introduce workflow import/export endpoints and tests

Issue - State: closed - Opened by tcompa 8 months ago
Labels: API, v2

#1320 - Attribute=`None` in task metadata output should unset the attribute

Issue - State: closed - Opened by tcompa 8 months ago - 4 comments
Labels: v2

#1319 - Enforce that `zarr_url` must be relative to `zarr_dir`

Issue - State: closed - Opened by tcompa 8 months ago - 3 comments
Labels: API, v2

#1318 - Review `_DatasetHistoryItemV2`

Issue - State: open - Opened by tcompa 8 months ago - 1 comment
Labels: History/Status, API, v2

#1317 - 1316 review use singleimage or filters within v2 runner

Pull Request - State: closed - Opened by tcompa 8 months ago - 2 comments

#1316 - Review use `SingleImage` or `Filters` within V2 runner

Issue - State: closed - Opened by tcompa 8 months ago
Labels: v2

#1315 - Prune useless `db.add` and `db.merge`

Pull Request - State: closed - Opened by ychiucco 8 months ago - 2 comments

#1314 - Fix `page_size` in image pagination

Pull Request - State: closed - Opened by ychiucco 8 months ago - 1 comment

#1313 - Set up task models in fractal-tasks-mock dev tools

Pull Request - State: closed - Opened by tcompa 8 months ago - 1 comment

#1312 - Rename test modules with duplicate names

Pull Request - State: closed - Opened by tcompa 8 months ago - 1 comment

#1311 - Fix benchmarks GHA, and use it for V2 API only

Issue - State: closed - Opened by tcompa 8 months ago - 2 comments
Labels: testing, performance, v2

#1310 - Merge `dev-v2` into `main`

Pull Request - State: closed - Opened by tcompa 8 months ago - 1 comment

#1309 - Rename `apply` endpoint and add `TaskManifestV2` validators

Pull Request - State: closed - Opened by ychiucco 8 months ago - 1 comment

#1308 - TaskV2 meta defaults

Pull Request - State: closed - Opened by ychiucco 8 months ago - 1 comment

#1307 - Re-enable SLURM test

Pull Request - State: closed - Opened by tcompa 8 months ago - 1 comment

#1306 - [auto] Update dependencies in `poetry.lock`

Pull Request - State: closed - Opened by tcompa 8 months ago - 2 comments

#1305 - Dev v2 re-enable slurm

Pull Request - State: closed - Opened by tcompa 8 months ago - 1 comment

#1304 - Dev v2 runner error handling

Pull Request - State: closed - Opened by tcompa 8 months ago - 1 comment

#1303 - Dev v2 test refactor

Pull Request - State: closed - Opened by tcompa 8 months ago - 2 comments

#1302 - Dev v2 runner

Pull Request - State: closed - Opened by tcompa 8 months ago

#1301 - Dev v2 runner / towards error handling

Pull Request - State: closed - Opened by tcompa 8 months ago

#1300 - Add flag `Task.is_v2_compatible`

Pull Request - State: closed - Opened by ychiucco 8 months ago - 1 comment

#1299 - Add V1 to schemas

Pull Request - State: closed - Opened by ychiucco 8 months ago

#1298 - Unique `source` for Task V1 and V2

Pull Request - State: closed - Opened by ychiucco 8 months ago

#1297 - Test Task and WorkflowTask V2

Pull Request - State: closed - Opened by ychiucco 8 months ago

#1296 - More work on runner v2 integration

Pull Request - State: closed - Opened by tcompa 8 months ago

#1295 - More work on runner v2 integration

Pull Request - State: closed - Opened by tcompa 8 months ago - 2 comments

#1294 - First part of function->executable runner update

Pull Request - State: closed - Opened by tcompa 8 months ago

#1293 - Update TaskV2 api

Pull Request - State: closed - Opened by ychiucco 8 months ago

#1292 - Simplify runner setup calls

Pull Request - State: closed - Opened by tcompa 8 months ago

#1291 - Simplify runner setup calls

Pull Request - State: closed - Opened by tcompa 8 months ago - 1 comment

#1290 - [auto] Update dependencies in `poetry.lock`

Pull Request - State: closed - Opened by tcompa 8 months ago - 2 comments

#1289 - first try for v1 compatibility

Pull Request - State: closed - Opened by tcompa 8 months ago

#1288 - Return last page if `page` is too big

Pull Request - State: closed - Opened by ychiucco 8 months ago

#1287 - Fix JSON Schemas in task collection

Pull Request - State: closed - Opened by tcompa 8 months ago

#1286 - Test image module

Pull Request - State: closed - Opened by ychiucco 8 months ago

#1285 - Start refactoring mock task package

Pull Request - State: closed - Opened by tcompa 8 months ago

#1284 - Reintroduce `GET /project/{project_id}/dataset/{dataset_id}/export_history/` in v2

Issue - State: open - Opened by ychiucco 8 months ago
Labels: History/Status

#1282 - Dev v2 post march 21

Pull Request - State: closed - Opened by tcompa 8 months ago - 3 comments

#1281 - Benchmark images functions

Pull Request - State: closed - Opened by tcompa 8 months ago - 2 comments

#1280 - POST new image

Pull Request - State: closed - Opened by ychiucco 8 months ago

#1279 - New image query pagination

Pull Request - State: closed - Opened by ychiucco 8 months ago

#1278 - Re-enable `test_rate_limit`

Issue - State: closed - Opened by tcompa 8 months ago
Labels: backlog, testing, v2

#1277 - `WFTaskV2.is_legacy_task` and `WFTaskImport/ExportV2`

Pull Request - State: closed - Opened by ychiucco 8 months ago

#1276 - Merge main into dev-v2

Pull Request - State: closed - Opened by tcompa 8 months ago

#1275 - Task collection v1/v2 refactor

Pull Request - State: closed - Opened by tcompa 8 months ago - 1 comment

#1274 - [auto] Update dependencies in `poetry.lock`

Pull Request - State: closed - Opened by tcompa 8 months ago - 2 comments

#1273 - Include new `SingleImage.flags` in API v2

Pull Request - State: closed - Opened by ychiucco 8 months ago

#1272 - Images api v2

Pull Request - State: closed - Opened by ychiucco 8 months ago

#1271 - First version of `image.attributes/image.flags` split

Pull Request - State: closed - Opened by tcompa 8 months ago

#1270 - Images API

Pull Request - State: closed - Opened by ychiucco 8 months ago
Labels: v2

#1269 - Add `origin` to images

Pull Request - State: closed - Opened by tcompa 8 months ago

#1268 - Images API v2

Pull Request - State: closed - Opened by ychiucco 8 months ago

#1267 - First prototype of compound tasks

Pull Request - State: closed - Opened by tcompa 8 months ago

#1266 - 1249 make cfutslurmjobs finished more robust

Pull Request - State: closed - Opened by mfranzon 8 months ago - 2 comments

#1265 - [auto] Update dependencies in `poetry.lock`

Pull Request - State: closed - Opened by tcompa 8 months ago - 2 comments

#1264 - API v2

Pull Request - State: closed - Opened by ychiucco 8 months ago

#1263 - API v2

Pull Request - State: closed - Opened by ychiucco 8 months ago
Labels: v2

#1262 - Introduce `Dataset.zarr_dir`

Pull Request - State: closed - Opened by ychiucco 9 months ago

#1261 - [auto] Update dependencies in `poetry.lock`

Pull Request - State: closed - Opened by tcompa 9 months ago - 2 comments

#1260 - Use autoincrement for IDs (with sqlite)

Issue - State: open - Opened by tcompa 9 months ago
Labels: sqlite

#1259 - Handle `JSONDecodeError`

Pull Request - State: closed - Opened by ychiucco 9 months ago - 2 comments

#1258 - Merge main into dev-v2

Pull Request - State: closed - Opened by tcompa 9 months ago

#1257 - Handle exception in `GET /project/{project_id}/dataset/{dataset_id}/status/`

Issue - State: closed - Opened by tcompa 9 months ago
Labels: bug, API

#1256 - DB-API v2

Pull Request - State: closed - Opened by ychiucco 9 months ago
Labels: v2

#1255 - refactor _backends and add clusterfutures to required deps

Pull Request - State: closed - Opened by mfranzon 9 months ago - 2 comments

#1254 - Remove `slurm` extra

Issue - State: closed - Opened by tcompa 9 months ago - 1 comment
Labels: dependencies