Ecosyste.ms: Issues

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GitHub / fpusan/SuperPang issues and pull requests

#18 - AttributeError: 'mOTU' object has no attribute 'members'

Issue - State: open - Opened by wyim-pgl 2 months ago - 3 comments

#16 - input genome position information

Issue - State: open - Opened by marade 4 months ago - 2 comments

#15 - assert len(kmers) == 2 AssertionError

Issue - State: closed - Opened by alephreish 5 months ago - 5 comments

#14 - Gap size and sequence clean-up

Pull Request - State: closed - Opened by alephreish 5 months ago - 3 comments

#13 - ValueError: invalid vertex: 3; condense-edges.py error.

Issue - State: closed - Opened by pavlohrab 6 months ago - 3 comments

#12 - There was an error running homogenize.py

Issue - State: closed - Opened by azk001 9 months ago - 13 comments

#11 - v1.0.0

Pull Request - State: closed - Opened by fpusan over 1 year ago

#10 - There was an error running homogenize.py

Issue - State: closed - Opened by timyerg over 1 year ago - 12 comments

#9 - errors when running the test-SuperPang.py

Issue - State: closed - Opened by liushanlin over 1 year ago - 4 comments

#8 - mOTUpan

Issue - State: closed - Opened by jnwoodhouse over 2 years ago - 4 comments

#7 - How to improve the mOTUpan core-genome estimation for viruses species?

Issue - State: closed - Opened by yi1873 over 2 years ago - 4 comments

#6 - the pangeome size is larger than all size of input genomes

Issue - State: closed - Opened by yi1873 over 2 years ago - 7 comments

#5 - Error after identifying connected components

Issue - State: closed - Opened by cifuj over 2 years ago - 15 comments

#4 - IndexError: list index out of range

Issue - State: closed - Opened by yi1873 over 2 years ago - 8 comments

#3 - multiple file paths for `--fasta`

Issue - State: closed - Opened by nick-youngblut over 2 years ago - 1 comment

#2 - Read checkm file at the begining even if not yet needed

Issue - State: closed - Opened by fpusan almost 3 years ago

#1 - IndexError: list index out of range

Issue - State: closed - Opened by wanglei8851 almost 3 years ago - 2 comments