forestbiotech-lab/sRNA-Portal-workflow issues and pull requests

#100 - ### Actions in Conflicted rows

Issue - State: closed - Opened by netbofia over 4 years ago

#99 - ## DE main page

Issue - State: closed - Opened by netbofia over 4 years ago

#98 - Create a WS client

Issue - State: closed - Opened by netbofia over 4 years ago

#97 - Issues with lingering webSocket

Issue - State: closed - Opened by netbofia over 4 years ago

#96 - Update uploaded values of tables via WebSocket

Issue - State: closed - Opened by netbofia over 4 years ago

#95 - sRNA upload Notification of results

Issue - State: closed - Opened by netbofia over 4 years ago - 1 comment

#94 - Fix upload

Issue - State: closed - Opened by netbofia over 4 years ago

#93 - Form multiple tables

Issue - State: closed - Opened by netbofia over 4 years ago

#92 - Documentation for getting generating table forms

Issue - State: closed - Opened by netbofia over 4 years ago

#91 - Primitive scoring module

Issue - State: open - Opened by netbofia over 4 years ago
Labels: Targets, Assay Data

#90 - infinity loader

Issue - State: open - Opened by netbofia over 4 years ago
Labels: enhancement, New feature, Assay Data

#89 - Only get annotations and expression for miRNAs to simplify query.

Issue - State: open - Opened by netbofia over 4 years ago
Labels: enhancement, question, New feature, Assay Data, Interface

#88 - Reformulate assay data table so it is possible to separate the various attributes.

Issue - State: closed - Opened by netbofia over 4 years ago
Labels: Assay Data

#87 - Documentation about assaydata and grouping

Issue - State: open - Opened by netbofia over 4 years ago
Labels: Assay Data, Documentation

#86 - Fix Targets submission view:

Issue - State: open - Opened by netbofia over 4 years ago
Labels: Targets, Interface

#85 - Mapping - [View] to map target attributes in file to those in DB

Issue - State: open - Opened by netbofia over 4 years ago
Labels: Targets, Interface

#84 - Attribution view - Where column are assigned to attributes in the tables involved

Issue - State: closed - Opened by netbofia over 4 years ago

#83 - Upload targets [Obj:not defined]

Issue - State: closed - Opened by netbofia over 4 years ago

#82 - Sequence search

Issue - State: closed - Opened by netbofia over 4 years ago

#81 - Select raw or cpm

Issue - State: closed - Opened by netbofia over 4 years ago

#80 - Add loading event

Issue - State: closed - Opened by netbofia over 4 years ago

#79 - Allow horizontal scroll if table is too wide

Issue - State: closed - Opened by netbofia over 4 years ago

#78 - Fix bug, mature_miRNA_id isn't placed in annotation. There must be some problem with save sequences.

Issue - State: closed - Opened by netbofia over 4 years ago
Labels: bug

#77 - Generate a view for the Assay data with annotations

Issue - State: closed - Opened by netbofia over 4 years ago

#76 - Count Assay Data associated to a study to add to a badge

Issue - State: closed - Opened by netbofia over 4 years ago

#75 - Correct the multiple entries for tables:

Issue - State: closed - Opened by netbofia over 4 years ago

#74 - View for assay

Issue - State: closed - Opened by netbofia over 4 years ago

#73 - Add validation of study

Issue - State: closed - Opened by netbofia over 4 years ago

#72 - Checkbox translation for boolean fields:

Issue - State: closed - Opened by netbofia over 4 years ago

#71 - Update form data for table

Issue - State: closed - Opened by netbofia over 4 years ago

#70 - Select to query Studies.

Issue - State: closed - Opened by netbofia over 4 years ago

#69 - Forms for single table saving

Issue - State: closed - Opened by netbofia over 4 years ago

#68 - Add mysql tables

Issue - State: closed - Opened by netbofia over 4 years ago
Labels: enhancement

#67 - Lazy load when there are more then 100 sequences

Issue - State: closed - Opened by netbofia over 4 years ago

#66 - Work on json object instead of directly on jq Object

Issue - State: closed - Opened by netbofia over 4 years ago

#65 - Look up sequence and add annotation

Issue - State: closed - Opened by netbofia over 4 years ago
Labels: enhancement

#64 - set min height for side panel

Issue - State: closed - Opened by netbofia over 4 years ago

#63 - generate table from uploaded data

Issue - State: closed - Opened by netbofia over 4 years ago

#62 - detect duplicate rows within upload

Issue - State: closed - Opened by netbofia over 4 years ago
Labels: enhancement

#61 - Bump bootstrap from 3.3.7 to 3.4.1

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#60 - Bump lodash from 4.17.11 to 4.17.15

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#59 - Bump sequelize from 4.39.0 to 5.15.1

Pull Request - State: closed - Opened by dependabot[bot] over 4 years ago - 1 comment
Labels: dependencies

#58 - change the console.log() in helper functions with debug subitem of #21

Issue - State: open - Opened by netbofia over 5 years ago
Labels: enhancement

#57 - Structure platform to use biocontainers for miRPursuit

Issue - State: open - Opened by netbofia over 5 years ago
Labels: enhancement

#56 - Make miRPursuit docker image

Issue - State: open - Opened by netbofia over 5 years ago
Labels: enhancement

#55 - Select all none doesn't trigger action

Issue - State: open - Opened by netbofia over 5 years ago
Labels: bug

#54 - Build page to display all the species and stats

Issue - State: closed - Opened by netbofia over 5 years ago
Labels: enhancement

#53 - Adapt drawrnajs to work within template

Issue - State: open - Opened by netbofia over 5 years ago
Labels: enhancement

#52 - Fix issue with re searching once data has been loaded

Issue - State: closed - Opened by netbofia over 5 years ago
Labels: bug

#51 - Render table on small screens

Issue - State: open - Opened by netbofia over 5 years ago
Labels: enhancement

#50 - Search options tooltips

Issue - State: closed - Opened by netbofia over 5 years ago
Labels: enhancement

#49 - Completely disable Cookies for site if consent isn't granted

Issue - State: open - Opened by netbofia over 5 years ago
Labels: enhancement

#48 - Add warning about placing Cookies with GDPR quotes

Issue - State: closed - Opened by netbofia over 5 years ago
Labels: New feature

#47 - Add sequence formating using either Sequence Viewer or react SV

Issue - State: open - Opened by netbofia over 5 years ago - 2 comments
Labels: enhancement

#46 - Search analytics

Issue - State: open - Opened by netbofia over 5 years ago
Labels: New feature

#45 - Create program for automatic insertion of miRBase miRNAs by species

Issue - State: closed - Opened by netbofia over 5 years ago
Labels: New feature

#44 - Change path to get species in primary search

Issue - State: closed - Opened by netbofia over 5 years ago
Labels: enhancement

#43 - Build graph between mature and precuror miRNAs using D3

Issue - State: closed - Opened by netbofia over 5 years ago
Labels: New feature

#42 - Refactor app for new data model changes

Issue - State: closed - Opened by netbofia over 5 years ago
Labels: enhancement

#41 - Define the accesions for pre_miRNAs

Issue - State: open - Opened by netbofia over 5 years ago
Labels: New feature

#40 - Define the accessions for mature miRNAs generated by system

Issue - State: open - Opened by netbofia over 5 years ago
Labels: New feature

#39 - Make script to generate gff3 file from miRCat results

Issue - State: open - Opened by netbofia over 5 years ago
Labels: New feature

#38 - Details of result expand container beyond parent size

Issue - State: closed - Opened by netbofia over 5 years ago
Labels: bug

#37 - Expand button should not apeear in errors or warnings

Issue - State: closed - Opened by netbofia over 5 years ago
Labels: bug

#36 - Multiple feature for Pre_miRNA? Getting last only

Issue - State: open - Opened by netbofia over 5 years ago
Labels: bug

#35 - Add features to mature miRNA results

Issue - State: closed - Opened by netbofia over 5 years ago
Labels: New feature

#34 - Draw interface pipeline - Tweak all configuration files

Issue - State: open - Opened by netbofia over 5 years ago
Labels: New feature

#33 - Filters Select all | none Buttons

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#32 - Split stylesheets

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#31 - Choose between exact and similar search in advanced search

Issue - State: open - Opened by netbofia almost 6 years ago
Labels: enhancement

#30 - Implement method of removing row once filter items checks are set to false

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#29 - Warning in console - Check issue with table sorter

Issue - State: closed - Opened by netbofia almost 6 years ago - 1 comment
Labels: bug

#28 - Check sanity of this router in index

Issue - State: open - Opened by netbofia almost 6 years ago
Labels: question, security

#27 - changeAttr in database.javascript

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#26 - Fix clean up: key "_table" is kept with undefined as value

Issue - State: open - Opened by netbofia almost 6 years ago
Labels: bug

#25 - Not searching multiple names in database with wildcards

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: bug

#24 - Change name of project

Issue - State: open - Opened by netbofia almost 6 years ago
Labels: question

#23 - Get a way to supress warning in sequelize

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: bug

#22 - Define tables with new version of sequelize

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#21 - Swap all console.logs with debug and set flag

Issue - State: open - Opened by netbofia almost 6 years ago
Labels: enhancement

#20 - Implement filter by Organism for search results

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#19 - Refactor Utiliites createTable to generate tables for all in latest_backup.sql

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#18 - Refactor direct db call

Issue - State: open - Opened by netbofia almost 6 years ago
Labels: enhancement

#17 - Refactor most of database.js

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#16 - Adapt DB results to structure like in BrAPI

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#15 - Create mechanism to sync lists every period

Issue - State: open - Opened by netbofia almost 6 years ago
Labels: New feature

#14 - Create list of sequences for autocomplete in search

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#13 - Create a list of miRNA names to autocomplete

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#12 - Add area for Database filters

Issue - State: closed - Opened by netbofia almost 6 years ago - 1 comment
Labels: enhancement

#11 - Reporting error on DB seach enlarges table out of its container

Issue - State: open - Opened by netbofia almost 6 years ago - 1 comment
Labels: bug

#10 - An error occured for seach

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#9 - No results found for search

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#8 - Add Feature for all species in miRBase

Issue - State: open - Opened by netbofia almost 6 years ago

#7 - Add Pre_miRNAs for all species in miRBase

Issue - State: open - Opened by netbofia almost 6 years ago
Labels: enhancement

#6 - Add Pre_miRNAs for Ath

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#5 - Add Features for Ath

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#4 - Add genomes

Issue - State: open - Opened by netbofia almost 6 years ago
Labels: enhancement

#3 - Add organism for Ath

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#2 - Add genome for Ath

Issue - State: closed - Opened by netbofia almost 6 years ago
Labels: enhancement

#1 - Add Organisms

Issue - State: open - Opened by netbofia almost 6 years ago - 2 comments
Labels: enhancement

GitHub / forestbiotech-lab/sRNA-Portal-workflow issues and pull requests