Ecosyste.ms: Issues

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GitHub / fnothaft/ananas issues and pull requests

#21 - [ananas-20] Resolves clobbering of forward/reverse strand k-mers.

Pull Request - State: closed - Opened by fnothaft over 9 years ago

#20 - Forward/Reverse information being lost in DeBruijnGraph

Issue - State: closed - Opened by ananth-pallaseni over 9 years ago - 1 comment

#19 - [ananas-18] Fix directionality of k-mers drawn from contig fragments.

Pull Request - State: closed - Opened by fnothaft over 9 years ago

#17 - Don't pollute log on build

Pull Request - State: closed - Opened by fnothaft over 9 years ago

#16 - Upgrade to latest ADAM release

Issue - State: open - Opened by fnothaft over 9 years ago

#15 - Log pollution on Spark 1.4.1

Issue - State: open - Opened by fnothaft over 9 years ago

#14 - Upgrade Spark, Parquet, ADAM, and utils versions

Issue - State: open - Opened by fnothaft over 9 years ago
Labels: enhancement

#13 - [ananas-12] Fixes issue where non-canonical k-mers were being dropped.

Pull Request - State: closed - Opened by fnothaft over 9 years ago

#11 - Changed utils version to 0.2.3

Pull Request - State: closed - Opened by ananth-pallaseni over 9 years ago - 1 comment

#10 - Adding code to implement stateful graph traversal.

Pull Request - State: closed - Opened by fnothaft over 9 years ago

#9 - Adding hooks for deploying to Sonatype snapshot repo.

Pull Request - State: closed - Opened by fnothaft over 9 years ago

#8 - Add colored de Bruijn graph

Pull Request - State: closed - Opened by fnothaft over 9 years ago

#7 - Added de Bruijn graph representation

Pull Request - State: closed - Opened by fnothaft over 9 years ago

#6 - readme

Issue - State: open - Opened by antonkulaga almost 10 years ago

#5 - Modifications to improve memory performance.

Pull Request - State: closed - Opened by fnothaft almost 10 years ago

#4 - Add runner

Pull Request - State: closed - Opened by fnothaft almost 10 years ago

#3 - Emit assembled contigs.

Pull Request - State: closed - Opened by fnothaft almost 10 years ago

#2 - Adding transitive reduction code.

Pull Request - State: closed - Opened by fnothaft almost 10 years ago

#1 - Add overlapper

Pull Request - State: closed - Opened by fnothaft almost 10 years ago