Ecosyste.ms: Issues

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GitHub / flekschas/enhancer-gene-vis issues and pull requests

#71 - chore: bump json5 from 1.0.1 to 1.0.2

Pull Request - State: open - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#70 - chore: bump decode-uri-component from 0.2.0 to 0.2.2

Pull Request - State: open - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#69 - chore: bump loader-utils from 1.4.0 to 1.4.2

Pull Request - State: open - Opened by dependabot[bot] about 2 years ago
Labels: dependencies

#68 - chore: bump loader-utils from 1.4.0 to 1.4.1

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#67 - Add BPNet prediction track to DNA Accessibility section

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#66 - Push back post-v2 merge commits onto master

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#65 - Bump minimist and higlass

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#64 - Bump jsdom and react-scripts

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#63 - Bump shell-quote and react-scripts

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#62 - Remerge v2 into master using rebase strategy to show all commits

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#61 - chore: bump terser from 4.8.0 to 4.8.1

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#60 - Remerge v2 into master using non-squishing merge strategy

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#59 - Delete unused radio component

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#58 - refactor: remove unused infobar component

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#57 - Merge new features into main

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#56 - Add link to cell stratification yaml template

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#55 - Refactor gettrackbyuid to utils file

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#53 - Make stacked bar and strat bed views rerender on new data sources

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#52 - Enable swapping out DNA Accessibility data

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#50 - Type EnhancerGenePlot

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#49 - Modify stratified bed track based on new track data

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#48 - Switch out enhancer gene regions stacked bar track data

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#47 - Add opacity slider for arcs track

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#45 - Fix all data flow issues for new dataset for arcs track

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#44 - Enhancer region update

Pull Request - State: closed - Opened by riyavsinha over 2 years ago - 1 comment

#43 - Remove dependence of RidgeTrack on explicit index ordering of DNA Accessibility data

Pull Request - State: closed - Opened by riyavsinha over 2 years ago - 1 comment

#42 - Clean RidgeTrack typings and method inheritance

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#40 - Type RidgeTrack

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#39 - Add types for HiGlass HorizontalLine1DPixiTrack and inheritance

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#38 - Run lint autofix

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#36 - Move main App UI related components to separate directory

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#34 - Miscellaneous formatting and linting

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#32 - Type dna accessibility main component

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#31 - Type part of DNA Accessibility state and settings component

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#30 - Move DNA Accessibility to new dir, start typing

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#28 - Type enhancer regions

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#27 - Modify cell stratification via yaml file upload

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#26 - Add support for changeable cell stratification type

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#25 - Bump terser from 4.8.0 to 4.8.1

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago
Labels: dependencies

#23 - Add Modal opening for enhancer region switching

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#22 - Type ChromosomeInfo correctly

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#21 - Refactoring to TS to make VariantSettings component typed

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#18 - Start moving Enhancer regions into own dir, and add view config TS

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#17 - Start factoring out enhancer region state to TS

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#15 - Start refactoring out enhancer gene state

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#14 - Bump async from 2.6.3 to 2.6.4

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#13 - Bump eventsource from 1.0.7 to 1.1.2

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#12 - Bump lodash-es from 4.17.15 to 4.17.21

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies

#11 - Revert

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#10 - Refactor out variant state from state and constants and type them

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#9 - Start typing some hooks and utils

Pull Request - State: closed - Opened by riyavsinha over 2 years ago

#7 - Is there a way to download the ABC scores for a particular set of samples?

Issue - State: closed - Opened by kailashbp almost 3 years ago - 1 comment

#6 - super minor change

Issue - State: closed - Opened by kailashbp almost 3 years ago - 1 comment

#5 - Adding custom variants

Issue - State: open - Opened by AGunnell77 almost 4 years ago - 2 comments
Labels: question

#4 - enhancement: support other classes of structural variations

Issue - State: open - Opened by zhilongjia almost 4 years ago - 4 comments
Labels: enhancement

#3 - deply locally problem

Issue - State: closed - Opened by zhilongjia almost 4 years ago - 6 comments
Labels: bug

#2 - Add a data table of ABC predictions for a given genomic region

Issue - State: open - Opened by flekschas almost 4 years ago
Labels: enhancement

#1 - The fixed location can lead to issues.

Issue - State: open - Opened by flekschas almost 4 years ago
Labels: bug, enhancement