Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / flatironinstitute/inferelator issues and pull requests

#69 - bulk RNA-Seq and ATAC-Seq

Issue - State: open - Opened by rodongo about 1 month ago

#68 - ConditionDoesNotExistError: Unable to align metadata to expression data

Issue - State: closed - Opened by zscooper 9 months ago - 2 comments

#67 - Running StARS LASSO without TFA?

Issue - State: closed - Opened by OceaneCsn 11 months ago - 2 comments

#65 - Multitask multigene

Pull Request - State: closed - Opened by asistradition about 1 year ago - 1 comment

#61 - Multitask multigene

Pull Request - State: closed - Opened by asistradition over 1 year ago - 1 comment

#60 - problem with the format of priors input file

Issue - State: open - Opened by raman290307 over 1 year ago - 1 comment

#59 - v0.6.1

Pull Request - State: closed - Opened by asistradition almost 2 years ago - 1 comment

#58 - Multi-gene tasks & Velocity (v0.6.0)

Pull Request - State: closed - Opened by asistradition about 2 years ago

#57 - Time series

Issue - State: closed - Opened by torgeihv over 2 years ago - 1 comment

#56 - shuffle_prior_axis

Issue - State: closed - Opened by torgeihv over 2 years ago - 7 comments

#55 - Metadata format

Issue - State: closed - Opened by poorvam over 2 years ago - 1 comment

#54 - Prior connectivity matrix

Issue - State: closed - Opened by poorvam over 2 years ago - 1 comment

#53 - Dev v0.5.9

Pull Request - State: closed - Opened by asistradition over 2 years ago - 1 comment

#52 - Bring release changes over to dev

Pull Request - State: closed - Opened by asistradition over 2 years ago

#51 - Arguments for BBSR model

Issue - State: closed - Opened by frankligy over 2 years ago - 3 comments

#50 - Fix for issue #49

Pull Request - State: closed - Opened by spficklin over 2 years ago - 1 comment

#49 - Unhashable type: 'Index'

Issue - State: closed - Opened by spficklin over 2 years ago - 3 comments

#48 - v0.5.7

Pull Request - State: closed - Opened by asistradition about 3 years ago - 1 comment

#47 - Numba

Pull Request - State: closed - Opened by asistradition about 3 years ago - 1 comment

#46 - Performance improvements

Pull Request - State: closed - Opened by bgorissen about 3 years ago - 9 comments

#45 - v0.5.6

Pull Request - State: closed - Opened by asistradition about 3 years ago - 1 comment

#44 - Result object (why max recall is not 1?)

Issue - State: closed - Opened by frankligy over 3 years ago - 1 comment

#43 - New testing & CI

Pull Request - State: closed - Opened by asistradition over 3 years ago

#42 - gene has to contain regulator?

Issue - State: closed - Opened by frankligy over 3 years ago - 4 comments

#41 - v0.5.5

Pull Request - State: closed - Opened by asistradition over 3 years ago

#40 - v0.5.4

Pull Request - State: closed - Opened by asistradition over 3 years ago

#39 - reproduce network from paper

Issue - State: closed - Opened by koenvandenberge over 3 years ago - 4 comments

#38 - v0.5.3

Pull Request - State: closed - Opened by asistradition over 3 years ago

#37 - TFA workflow output error on MacOS

Issue - State: closed - Opened by IcyFermion over 3 years ago - 4 comments

#36 - Is it possible to run it only with expression and metadata?

Issue - State: closed - Opened by josruirod over 3 years ago - 2 comments

#35 - Final v0.5.2

Pull Request - State: closed - Opened by asistradition over 3 years ago

#34 - v0.5.2

Pull Request - State: closed - Opened by asistradition over 3 years ago

#33 - Inquiry regarding the Settings of Hyper-parameters

Issue - State: closed - Opened by sap01 over 3 years ago - 2 comments

#32 - v0.5.2

Pull Request - State: closed - Opened by asistradition almost 4 years ago

#31 - Fix dev split

Pull Request - State: closed - Opened by asistradition almost 4 years ago

#30 - v0.5.0

Pull Request - State: closed - Opened by asistradition almost 4 years ago

#29 - Adding MCC metric.

Pull Request - State: closed - Opened by Xparx about 4 years ago

#28 - Velocity inference

Pull Request - State: closed - Opened by asistradition over 4 years ago

#26 - Dev

Pull Request - State: closed - Opened by gs512 over 4 years ago

#25 - single_cell_cv_workflow to single_cell_workflow

Pull Request - State: closed - Opened by moqri over 4 years ago

#24 - Expression data normalization

Issue - State: closed - Opened by vvelasqz over 4 years ago - 1 comment

#23 - Lasso-stars dask

Pull Request - State: closed - Opened by asistradition over 4 years ago

#22 - Inferelator v0.4.0

Pull Request - State: closed - Opened by asistradition over 4 years ago

#21 - i

Issue - State: closed - Opened by lichan-upup over 4 years ago - 1 comment

#20 - Data wrapper

Pull Request - State: closed - Opened by asistradition over 4 years ago

#19 - Merge dev for v0.3.2

Pull Request - State: closed - Opened by asistradition almost 5 years ago - 1 comment

#18 - Tutorial for multitask learning workflow

Issue - State: closed - Opened by daria-dc almost 5 years ago - 2 comments

#17 - Running Inferelator without Metadata or TFs

Issue - State: closed - Opened by rlittman16 almost 5 years ago - 2 comments

#16 - v0.3.1

Pull Request - State: closed - Opened by asistradition about 5 years ago - 1 comment

#15 - Version 0.3.0

Pull Request - State: closed - Opened by asistradition about 5 years ago

#14 - Examples

Pull Request - State: closed - Opened by asistradition about 5 years ago

#13 - yeast data from tutorial

Issue - State: closed - Opened by LouisGil over 5 years ago - 1 comment

#12 - Update amusr_workflow.py

Pull Request - State: closed - Opened by gs512 over 5 years ago - 1 comment

#11 - Dev merge v0.2

Pull Request - State: closed - Opened by asistradition over 5 years ago - 2 comments

#10 - Dask

Pull Request - State: closed - Opened by asistradition over 5 years ago

#9 - Dask

Pull Request - State: closed - Opened by asistradition over 5 years ago

#8 - Dask

Pull Request - State: closed - Opened by asistradition over 5 years ago

#7 - len(P) --> rank(P) GCV speedup

Pull Request - State: closed - Opened by spncrhg over 5 years ago

#6 - Tab fix

Pull Request - State: closed - Opened by spncrhg over 5 years ago

#5 - TSVD For real this time.

Pull Request - State: closed - Opened by spncrhg over 5 years ago

#4 - TFA Rotation Project Code

Pull Request - State: closed - Opened by spncrhg over 5 years ago

#3 - TSVD TFA Calculator

Pull Request - State: closed - Opened by spncrhg over 5 years ago

#2 - Dask

Pull Request - State: closed - Opened by asistradition over 5 years ago

#1 - Dask

Pull Request - State: closed - Opened by asistradition over 5 years ago