Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / flatironinstitute/cryo-em-heterogeneity-challenge-1 issues and pull requests

#50 - Update config_svd.yaml: path_to_reference

Pull Request - State: closed - Opened by geoffwoollard 5 months ago - 1 comment
Labels: documentation

#50 - Update config_svd.yaml: path_to_reference

Pull Request - State: closed - Opened by geoffwoollard 5 months ago - 1 comment
Labels: documentation

#49 - update main with dev

Pull Request - State: closed - Opened by geoffwoollard 5 months ago - 1 comment

#49 - update main with dev

Pull Request - State: closed - Opened by geoffwoollard 5 months ago - 1 comment

#48 - update dev with main

Pull Request - State: closed - Opened by geoffwoollard 5 months ago

#48 - update dev with main

Pull Request - State: closed - Opened by geoffwoollard 5 months ago

#47 - Update testing.yaml

Pull Request - State: closed - Opened by DSilva27 5 months ago

#47 - Update testing.yaml

Pull Request - State: closed - Opened by DSilva27 5 months ago

#46 - Update testing.yml

Pull Request - State: closed - Opened by DSilva27 5 months ago - 12 comments

#46 - Update testing.yml

Pull Request - State: closed - Opened by DSilva27 5 months ago - 12 comments

#45 - Remove cache from GitHub actions test

Issue - State: closed - Opened by DSilva27 5 months ago

#45 - Remove cache from GitHub actions test

Issue - State: closed - Opened by DSilva27 5 months ago

#44 - Update .gitignore

Pull Request - State: closed - Opened by DSilva27 5 months ago - 1 comment

#44 - Update .gitignore

Pull Request - State: closed - Opened by DSilva27 5 months ago - 1 comment

#43 - Update .gitignore

Pull Request - State: closed - Opened by DSilva27 5 months ago

#43 - Update .gitignore

Pull Request - State: closed - Opened by DSilva27 5 months ago

#42 - cloud notebook for testing plots

Issue - State: open - Opened by geoffwoollard 5 months ago
Labels: enhancement

#42 - cloud notebook for testing plots

Issue - State: open - Opened by geoffwoollard 5 months ago
Labels: enhancement

#41 - Make data downloaded/generated by testing consistent

Issue - State: closed - Opened by DSilva27 5 months ago - 2 comments

#41 - Make data downloaded/generated by testing consistent

Issue - State: closed - Opened by DSilva27 5 months ago - 2 comments

#40 - preprocessing update and small path #39

Pull Request - State: closed - Opened by DSilva27 5 months ago - 7 comments
Labels: documentation, enhancement

#40 - preprocessing update and small path #39

Pull Request - State: closed - Opened by DSilva27 5 months ago - 7 comments
Labels: documentation, enhancement

#39 - Remove population file being hard coded in preprocessing

Issue - State: closed - Opened by DSilva27 5 months ago - 1 comment
Labels: enhancement

#39 - Remove population file being hard coded in preprocessing

Issue - State: closed - Opened by DSilva27 5 months ago - 1 comment
Labels: enhancement

#38 - Update .pre-commit-config.yaml

Pull Request - State: closed - Opened by DSilva27 5 months ago

#38 - Update .pre-commit-config.yaml

Pull Request - State: closed - Opened by DSilva27 5 months ago

#37 - update main

Pull Request - State: closed - Opened by geoffwoollard 5 months ago

#37 - update main

Pull Request - State: closed - Opened by geoffwoollard 5 months ago

#36 - generalize map to map distance

Pull Request - State: closed - Opened by geoffwoollard 5 months ago - 3 comments
Labels: enhancement

#36 - generalize map to map distance

Pull Request - State: closed - Opened by geoffwoollard 5 months ago - 3 comments
Labels: enhancement

#35 - DOI, change logs, and zenodo for github repo

Issue - State: open - Opened by geoffwoollard 5 months ago - 3 comments
Labels: documentation, question

#35 - DOI, change logs, and zenodo for github repo

Issue - State: open - Opened by geoffwoollard 5 months ago - 3 comments
Labels: documentation, question

#34 - Tutorial readme

Pull Request - State: closed - Opened by geoffwoollard 5 months ago - 1 comment
Labels: documentation

#34 - Tutorial readme

Pull Request - State: closed - Opened by geoffwoollard 5 months ago - 1 comment
Labels: documentation

#33 - New Github Actions

Pull Request - State: closed - Opened by DavidHerreros 5 months ago - 4 comments
Labels: enhancement

#33 - New Github Actions

Pull Request - State: closed - Opened by DavidHerreros 5 months ago - 4 comments
Labels: enhancement

#32 - Update README.md

Pull Request - State: closed - Opened by geoffwoollard 5 months ago

#32 - Update README.md

Pull Request - State: closed - Opened by geoffwoollard 5 months ago

#31 - generalize map to map distance

Issue - State: closed - Opened by geoffwoollard 5 months ago - 2 comments

#31 - generalize map to map distance

Issue - State: closed - Opened by geoffwoollard 5 months ago - 2 comments

#30 - enforce merging rules

Issue - State: closed - Opened by geoffwoollard 5 months ago

#30 - enforce merging rules

Issue - State: closed - Opened by geoffwoollard 5 months ago

#29 - Update README.md

Pull Request - State: closed - Opened by DavidHerreros 5 months ago - 3 comments

#29 - Update README.md

Pull Request - State: closed - Opened by DavidHerreros 5 months ago - 3 comments

#28 - a better unit test that checks more functionality in preprocessing and svd

Issue - State: open - Opened by geoffwoollard 5 months ago
Labels: enhancement

#27 - README

Issue - State: closed - Opened by geoffwoollard 5 months ago - 2 comments

#26 - tests for proprocess and svd

Pull Request - State: closed - Opened by geoffwoollard 5 months ago

#25 - New cached functionality to speed up PR testing

Pull Request - State: closed - Opened by DavidHerreros 5 months ago - 2 comments
Labels: enhancement, not blocking repo going public

#24 - Iss18 notebook plots

Pull Request - State: closed - Opened by geoffwoollard 5 months ago - 10 comments

#23 - incorporate pytest in github workflows

Pull Request - State: closed - Opened by geoffwoollard 5 months ago - 4 comments

#22 - Adding interactive path selections to Jupyter notebooks

Pull Request - State: closed - Opened by DavidHerreros 5 months ago - 2 comments

#21 - add .gitignore

Issue - State: closed - Opened by geoffwoollard 5 months ago
Labels: resolve before going public

#20 - refactor fourier_shell_correlation

Issue - State: open - Opened by geoffwoollard 5 months ago
Labels: high priority

#19 - add GPU functionality (speedups)

Issue - State: open - Opened by geoffwoollard 5 months ago - 1 comment
Labels: enhancement, high priority

#18 - plotting notebook (map2map dist2dist results)

Issue - State: closed - Opened by geoffwoollard 6 months ago
Labels: resolve before going public

#17 - Rename tutorials with a label to show their order

Pull Request - State: closed - Opened by DavidHerreros 6 months ago

#16 - Test SVD pipeline with a filtered version of the Ground Truth

Issue - State: closed - Opened by DSilva27 6 months ago - 1 comment
Labels: not blocking repo going public

#15 - Implement power spectrum normalization and include it in SVD pipeline closes #14

Pull Request - State: closed - Opened by DSilva27 6 months ago - 8 comments

#14 - Implement power spectrum normalization

Issue - State: closed - Opened by DSilva27 6 months ago - 1 comment
Labels: enhancement

#13 - Fixes on the workflow execution

Pull Request - State: closed - Opened by DavidHerreros 6 months ago

#12 - Should results be stored on a single or multiple files?

Issue - State: closed - Opened by DavidHerreros 6 months ago - 2 comments
Labels: enhancement

#11 - Suggestions to improve workflow usability

Issue - State: closed - Opened by DavidHerreros 6 months ago - 4 comments
Labels: enhancement, resolve before going public

#10 - Centralization needed on the population file

Issue - State: closed - Opened by DavidHerreros 6 months ago - 4 comments
Labels: bug, resolve before going public

#9 - Addtional installation dependencies

Pull Request - State: closed - Opened by DavidHerreros 6 months ago

#8 - distribution to distribution - tutorial notebook, docs, command.

Pull Request - State: closed - Opened by geoffwoollard 7 months ago
Labels: documentation, enhancement

#7 - notebook and docs for distribution to distribution

Issue - State: closed - Opened by geoffwoollard 7 months ago

#6 - set up logging

Issue - State: open - Opened by DSilva27 7 months ago - 2 comments

#5 - Iss3 notebooks docs

Pull Request - State: closed - Opened by geoffwoollard 7 months ago
Labels: documentation

#4 - 3D visualization tools

Issue - State: open - Opened by geoffwoollard 7 months ago - 1 comment
Labels: enhancement

#3 - notebooks / documentation for map to map distances

Issue - State: closed - Opened by geoffwoollard 7 months ago
Labels: documentation

#2 - unit tests

Issue - State: closed - Opened by geoffwoollard 7 months ago - 6 comments
Labels: enhancement, not blocking repo going public

#1 - Use Aspire's BOTAlign

Issue - State: closed - Opened by DSilva27 7 months ago