fjug/MoMA issues and pull requests

#44 - Update to SciJava Maven repository

Pull Request - State: closed - Opened by ctrueden over 5 years ago - 1 comment

#43 - Fix command line usage

Pull Request - State: open - Opened by frauzufall over 5 years ago

#42 - Use HTTPS for imagej.net URLs

Pull Request - State: closed - Opened by ctrueden over 5 years ago

#41 - Java exception thrown inFiji on first use

Issue - State: closed - Opened by jblugagne almost 6 years ago - 8 comments

#40 - POM: make junit test scope

Pull Request - State: closed - Opened by ctrueden about 7 years ago - 1 comment

#39 - Update to parent POM scijava 16.1.0

Pull Request - State: closed - Opened by frauzufall over 7 years ago

#38 - POM update

Pull Request - State: closed - Opened by frauzufall over 7 years ago

#37 - the default property file is overriden when a custom property file is used

Issue - State: open - Opened by julou over 7 years ago

#36 - gurobi license not detect with custom GRB_LICENSE_FILE

Issue - State: closed - Opened by julou over 7 years ago - 2 comments

#35 - export of pruned lineages doesn't indicate pruning

Issue - State: open - Opened by julou over 7 years ago - 1 comment
Labels: bug

#34 - Merge to fix issue #33 failed installation of Gurobi on Ubuntu

Pull Request - State: closed - Opened by haesleinhuepf over 7 years ago - 1 comment

#33 - Error java library path for Gurobi

Issue - State: open - Opened by TheoGervais over 7 years ago - 1 comment

#32 - Imagej fiji pluginize

Pull Request - State: closed - Opened by haesleinhuepf almost 8 years ago - 1 comment

#31 - Make MoMA have more friendly explanation for installation

Pull Request - State: closed - Opened by hkmoon almost 8 years ago

#30 - missing documentation

Issue - State: open - Opened by julou about 8 years ago - 1 comment
Labels: documentation

#29 - preprocessing: file name parsing fails with "_t"

Issue - State: closed - Opened by guiwitz about 8 years ago - 5 comments
Labels: bug

#28 - bug?? some assignments between segmentation hypotheses cannot be displayed

Issue - State: open - Opened by julou about 8 years ago
Labels: bug, documentation

#27 - Add plugins extension to MoMA

Issue - State: open - Opened by julou about 8 years ago - 2 comments
Labels: feature request, suggestion

#26 - Record runtime parameters in output file(s).

Issue - State: open - Opened by erikvannimwegen about 8 years ago - 4 comments

#25 - [release issue] Check moma robustness to changes in phase contrast images

Issue - State: open - Opened by julou about 8 years ago - 3 comments

#24 - [support/feature request] adjust the GC length from the GUI

Issue - State: open - Opened by julou about 8 years ago - 2 comments

#23 - help on building MoMA from source

Issue - State: open - Opened by julou about 8 years ago - 3 comments
Labels: documentation

#22 - idea: filter reliable data without manual curation

Issue - State: open - Opened by julou about 8 years ago - 5 comments
Labels: suggestion

#21 - display better segment length estimates in GUI

Issue - State: open - Opened by julou about 8 years ago - 1 comment
Labels: feature request

#20 - allow to use other image types (than phase contrast) for tracking

Issue - State: open - Opened by julou about 8 years ago - 7 comments
Labels: feature request

#19 - preprocessing: refactor mmpreprocess as a plugin

Issue - State: open - Opened by julou about 8 years ago - 4 comments

#18 - discard cells touching the exit

Issue - State: open - Opened by julou over 8 years ago - 4 comments
Labels: feature request

#17 - list of minor changes to improve the ux

Issue - State: open - Opened by julou over 8 years ago - 6 comments
Labels: enhancement

#16 - Segment shown in detailed view but not selectable in main GUI

Issue - State: open - Opened by julou over 8 years ago - 5 comments

#15 - Dataset name visible in started MoMA GUI

Issue - State: closed - Opened by fjug over 8 years ago - 1 comment
Labels: feature request

#14 - preprocessing: add a parameter for export file name template

Issue - State: closed - Opened by julou over 8 years ago - 1 comment

#13 - optimisation by range: pruned lineages are not propagated

Issue - State: open - Opened by julou over 8 years ago - 2 comments
Labels: bug

#12 - new parameter: optimisation range at startup

Issue - State: closed - Opened by julou over 8 years ago - 1 comment
Labels: feature request

#11 - optimization by range: "ILP infeasible" error

Issue - State: open - Opened by julou over 8 years ago - 1 comment
Labels: bug

#10 - display dataset name in the gui

Issue - State: closed - Opened by julou over 8 years ago
Labels: feature request

#9 - `mmpreprocess -c n` to analyse some fluo channels only

Issue - State: closed - Opened by julou over 8 years ago - 2 comments
Labels: feature request

#8 - Hyperstackreg considering only an active ROI for registration

Issue - State: closed - Opened by fjug over 8 years ago - 2 comments
Labels: feature request

#7 - Slightly change genealogy export

Issue - State: closed - Opened by fjug over 8 years ago - 1 comment
Labels: enhancement

#6 - Incorporate total fluorescence estimation and refined length estimation

Issue - State: open - Opened by fjug over 8 years ago - 1 comment
Labels: suggestion

#5 - Better parameters for HEADLESS mode

Issue - State: closed - Opened by fjug over 8 years ago - 4 comments
Labels: feature request

#4 - Clearly explain properties and property files

Issue - State: closed - Opened by fjug over 8 years ago - 3 comments
Labels: documentation

#3 - Preprocessing: keep image metadata available

Issue - State: open - Opened by fjug over 8 years ago

#2 - Support single GL image stacks

Issue - State: closed - Opened by fjug over 8 years ago - 7 comments
Labels: feature request

#1 - Fix GUI on Linux

Issue - State: closed - Opened by fjug over 8 years ago - 5 comments
Labels: enhancement

GitHub / fjug/MoMA issues and pull requests