fastqe/fastqe issues and pull requests

#39 - WIP: Cythonize to allow creating fastqe as single executable

Pull Request - State: open - Opened by Kai-Striega 2 months ago

#38 - WIP: Refresh packaging and fixes

Pull Request - State: open - Opened by Adamtaranto 2 months ago - 3 comments

#37 - fastq_emoji_map_binned contains non-text mapping '🚨'

Issue - State: open - Opened by Adamtaranto 2 months ago - 1 comment

#36 - Support Python 3.13

Issue - State: open - Opened by lonsbio 3 months ago

#35 - per sequence quality mode

Issue - State: open - Opened by lonsbio 3 months ago
Labels: enhancement

#34 - `--min` broken in 0.3.3

Issue - State: closed - Opened by lonsbio 3 months ago - 1 comment

#33 - version missing - undefined version

Issue - State: open - Opened by lonsbio 3 months ago

#32 - Update bioconda source repository

Issue - State: open - Opened by lonsbio 3 months ago

#31 - ⚠️ emoji is rendered inconsistently

Issue - State: open - Opened by lonsbio almost 4 years ago
Labels: bug

#30 - Biopython incompatibility

Issue - State: closed - Opened by shenwei356 almost 4 years ago - 2 comments

#29 - Remove unused IUPAC import which causes crash

Pull Request - State: closed - Opened by hexylena over 4 years ago

#28 - Add CONTRIBUTING.md file?

Issue - State: open - Opened by mblue9 over 4 years ago - 2 comments

#27 - Add run

Pull Request - State: closed - Opened by lonsbio over 4 years ago - 1 comment

#26 - Restore run_fastqe merge

Pull Request - State: closed - Opened by lonsbio over 4 years ago

#25 - Galaxy wrapper encoding

Issue - State: open - Opened by lonsbio over 4 years ago
Labels: bug

#24 - Modify functional_tests to match fastqe

Issue - State: open - Opened by lonsbio over 4 years ago

#23 - Minor BCC2020 changes, tests

Pull Request - State: closed - Opened by claresloggett over 4 years ago

#22 - Move websites to fastqe.github.io

Issue - State: closed - Opened by lonsbio over 4 years ago - 1 comment

#21 - Move website to fastqe.github.io

Issue - State: open - Opened by lonsbio over 4 years ago

#20 - Revert "run_fastqe for jupyter notebooks"

Pull Request - State: closed - Opened by lonsbio over 4 years ago

#19 - Add python test cases for run_fastqe

Issue - State: open - Opened by lonsbio over 4 years ago

#18 - Add basic statistics including total GC content %

Issue - State: open - Opened by lonsbio over 4 years ago
Labels: enhancement

#17 - Adaption to different score offsets

Issue - State: open - Opened by padix-key over 4 years ago

#16 - run_fastqe for jupyter notebooks

Pull Request - State: closed - Opened by cjwomack over 4 years ago - 1 comment

#15 - Code of conduct

Issue - State: closed - Opened by ewels over 4 years ago - 1 comment

#14 - In a fork on my repo implemented "Add FASTA mode for nucleotide and proteins emoji"

Issue - State: open - Opened by cjwomack over 4 years ago - 4 comments

#13 - Some tidying & tweaks

Pull Request - State: closed - Opened by ewels over 4 years ago

#12 - Minor issue with running a jupyter notebook in mybinder.org or google colab with Google Chrome on Windows

Issue - State: open - Opened by cjwomack over 4 years ago

#11 - MultiQC module

Issue - State: open - Opened by ewels over 4 years ago - 3 comments

#10 - Support for long read data

Issue - State: closed - Opened by hexylena over 4 years ago - 3 comments

#9 - Accept fastq.gz input

Issue - State: closed - Opened by lonsbio over 6 years ago - 2 comments
Labels: enhancement

#8 - Add option for custom emoji mapping

Issue - State: open - Opened by lonsbio over 6 years ago - 1 comment
Labels: enhancement

#7 - Add print map function

Issue - State: open - Opened by lonsbio over 6 years ago
Labels: enhancement

#6 - Update emoji map

Issue - State: open - Opened by lonsbio over 6 years ago
Labels: bug

#5 - Add conversion and compression

Issue - State: open - Opened by lonsbio over 6 years ago
Labels: enhancement

#4 - Update for 2018

Pull Request - State: closed - Opened by lonsbio over 6 years ago

#3 - scale bar

Issue - State: closed - Opened by lskatz about 7 years ago - 2 comments

#2 - Pyemojify not visible to python2.7 on OSX 10.9.5

Issue - State: closed - Opened by lonelyjoeparker over 7 years ago - 2 comments

#1 - Typo

Pull Request - State: closed - Opened by frederic-mahe over 7 years ago - 1 comment

GitHub / fastqe/fastqe issues and pull requests