Ecosyste.ms: Issues

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GitHub / evilkost/miXGENE issues and pull requests

#96 - SNMNMF restriction

Issue - State: open - Opened by klema almost 9 years ago

#95 - History of Workflow Execution

Issue - State: open - Opened by strny about 10 years ago

#94 - [exec_token branch] Rewrite do_action and fix save_params-validation routine.

Issue - State: open - Opened by evilkost over 10 years ago
Labels: bug

#92 - Remove explicit block registration

Issue - State: closed - Opened by evilkost over 10 years ago

#91 - Rework experiment representation and execution engine

Issue - State: open - Opened by evilkost over 10 years ago
Labels: enhancement, meta

#90 - Refactor JS code

Issue - State: open - Opened by evilkost over 10 years ago
Labels: enhancement, meta

#89 - Add 3d to PCA visualization

Issue - State: open - Opened by evilkost over 10 years ago

#88 - SNMNMF as a (descriptive) module identifier

Issue - State: open - Opened by klema over 10 years ago

#87 - Visualize table results

Issue - State: closed - Opened by klema over 10 years ago

#86 - Generalize Goeman global test plugin

Issue - State: closed - Opened by klema over 10 years ago - 1 comment

#85 - PCA visualization

Issue - State: closed - Opened by klema over 10 years ago - 2 comments

#84 - Articles can be written either in HTML or in markdown

Issue - State: closed - Opened by holecm over 10 years ago
Labels: enhancement, critical

#83 - Keep order in result containers

Issue - State: open - Opened by holecm over 10 years ago
Labels: enhancement

#81 - Add Mass upload meta block for user defined input.

Issue - State: open - Opened by evilkost over 10 years ago

#80 - Content of a deleted cell reappears when a new cell is added

Issue - State: open - Opened by holecm over 10 years ago
Labels: bug

#79 - Add "leave-one-out cross-validation" metablock

Issue - State: open - Opened by holecm over 10 years ago

#78 - [Custom iterator] add option to remove cell and redefine cells

Issue - State: open - Opened by holecm over 10 years ago

#77 - Add option to remove dynamic input

Issue - State: open - Opened by holecm over 10 years ago

#76 - A new "article type" for unpublished texts

Issue - State: closed - Opened by holecm over 10 years ago
Labels: enhancement

#75 - "indices are out-of-bounds" in cross-validation

Issue - State: open - Opened by holecm over 10 years ago
Labels: bug, question

#74 - Missing listbox---unable to set "CSV separator symbol" in "Mass upload" meta-block

Issue - State: closed - Opened by holecm over 10 years ago
Labels: bug

#73 - wokrflow deadlock in UPLOAD_CMPLX

Issue - State: open - Opened by holecm over 10 years ago
Labels: bug

#72 - Add the "Set-level aggregation" block

Issue - State: closed - Opened by holecm over 10 years ago - 1 comment

#71 - Add "Upload gene sets collection" block

Issue - State: closed - Opened by holecm over 10 years ago

#67 - Solve problem with in-browser caching of static files

Issue - State: open - Opened by evilkost over 10 years ago

#65 - Supervisor doesn't stop celery with guarantee. Investigate and repair.

Issue - State: open - Opened by evilkost over 10 years ago - 1 comment
Labels: critical

#62 - Store block `bound inputs` outside of block.

Issue - State: open - Opened by evilkost over 10 years ago

#61 - Hierarchical sub folder structure to store block variables

Issue - State: open - Opened by evilkost over 10 years ago

#60 - Execution state for each scope.

Issue - State: open - Opened by holecm over 10 years ago
Labels: critical

#59 - Add second type of articles: Tutorial

Issue - State: closed - Opened by evilkost over 10 years ago

#58 - Add ordering to blocks actions.

Issue - State: open - Opened by evilkost over 10 years ago

#56 - Improve miXGENE deploy.

Issue - State: open - Opened by evilkost over 10 years ago

#52 - Render outliers in boxplot

Issue - State: closed - Opened by evilkost over 10 years ago

#51 - Arbitrary file uploads, outside of experiments.

Issue - State: closed - Opened by evilkost over 10 years ago

#50 - Add more specific block annotation

Issue - State: closed - Opened by evilkost over 10 years ago

#49 - Allow export of predicted and true results as a json file

Issue - State: closed - Opened by evilkost over 10 years ago

#48 - Create common wrapper for sklearn classifiers.

Issue - State: closed - Opened by evilkost over 10 years ago

#47 - Add more classifiers

Issue - State: closed - Opened by evilkost over 10 years ago

#46 - Automate deploy process

Issue - State: closed - Opened by evilkost over 10 years ago - 1 comment
Labels: enhancement

#44 - Add feature selection block.

Issue - State: closed - Opened by evilkost over 10 years ago - 1 comment

#43 - Integrate R ranking methods (add 3 new blocks)

Issue - State: closed - Opened by evilkost over 10 years ago

#40 - Add ordering for input variables in block.

Issue - State: closed - Opened by evilkost over 10 years ago

#39 - Export tables from RenderTable block as csv

Issue - State: closed - Opened by evilkost over 10 years ago

#35 - Add mechanism to remove blocks.

Issue - State: closed - Opened by evilkost over 10 years ago - 2 comments
Labels: critical

#34 - Make possible to erase uploaded data.

Issue - State: closed - Opened by evilkost over 10 years ago

#33 - Mass upload block.

Issue - State: closed - Opened by evilkost over 10 years ago

#32 - Create generic celery wrapper

Issue - State: closed - Opened by evilkost over 10 years ago

#31 - Internal ports in meta-blocks must be created dynamically by user.

Issue - State: closed - Opened by evilkost over 10 years ago
Labels: enhancement

#28 - Add task to generate folds for cross validation

Issue - State: closed - Opened by evilkost almost 11 years ago

#27 - Rewrite sample assign class widget with angular

Issue - State: closed - Opened by evilkost almost 11 years ago

#26 - Create custom finite state machine module

Issue - State: closed - Opened by evilkost almost 11 years ago

#25 - Add gene sets block data provider

Issue - State: closed - Opened by evilkost almost 11 years ago
Labels: enhancement

#24 - Worklfow action: can't use more than one ParAction in one workflow

Issue - State: closed - Opened by evilkost almost 11 years ago
Labels: bug, wontfix

#23 - Unite modules vars.py, results.py and GMT from parser.py

Issue - State: closed - Opened by evilkost almost 11 years ago

#22 - Show number of samples for each class at sample_classify.html widget

Issue - State: closed - Opened by evilkost almost 11 years ago
Labels: enhancement

#21 - Workflow monitoring

Issue - State: open - Opened by evilkost almost 11 years ago

#20 - If some final action failed during experiment, show other results anyway.

Issue - State: closed - Opened by evilkost almost 11 years ago
Labels: bug, wontfix

#19 - Unified page for input parameters and show results

Issue - State: closed - Opened by evilkost almost 11 years ago
Labels: wontfix

#18 - Order inputs on configuration page

Issue - State: closed - Opened by evilkost almost 11 years ago
Labels: wontfix

#17 - Fetch same file only once.

Issue - State: closed - Opened by evilkost almost 11 years ago - 1 comment

#16 - Control to choose classification targets

Issue - State: closed - Opened by evilkost almost 11 years ago - 1 comment
Labels: enhancement

#15 - biopython GEO soft parser fail on some datasets

Issue - State: open - Opened by evilkost about 11 years ago

#14 - Refactor experiment->ctx dict to Class

Issue - State: closed - Opened by evilkost about 11 years ago
Labels: wontfix

#13 - Migrate to bootstrap 3.0

Issue - State: closed - Opened by evilkost about 11 years ago

#12 - Add logging into project

Issue - State: closed - Opened by evilkost about 11 years ago

#9 - Add parallel task execution to workflow

Issue - State: closed - Opened by evilkost over 11 years ago

#8 - Create infrastructure in django application for real workflows

Issue - State: closed - Opened by evilkost over 11 years ago - 1 comment

#6 - Create atomic task to read gene expression matrix from local file

Issue - State: closed - Opened by evilkost over 11 years ago - 1 comment

#5 - Decide how to store data between steps in workflow

Issue - State: closed - Opened by evilkost over 11 years ago - 1 comment

#4 - Workflow executer

Issue - State: closed - Opened by evilkost over 11 years ago

#3 - Dummy workflow instance

Issue - State: closed - Opened by evilkost over 11 years ago

#2 - Setup Celery

Issue - State: closed - Opened by evilkost over 11 years ago - 1 comment

#1 - Django devserver setup

Issue - State: closed - Opened by evilkost over 11 years ago