ericmjl/protein-systematic-characterization issues and pull requests

#69 - Open data science & machine learning problems in infectious disease

Issue - State: open - Opened by ericmjl almost 8 years ago - 1 comment

#68 - Vz goals

Pull Request - State: closed - Opened by Starnite almost 8 years ago - 1 comment

#67 - Barcode cloning

Pull Request - State: closed - Opened by ericmjl almost 8 years ago

#66 - Annotate ape files

Pull Request - State: closed - Opened by ericmjl almost 8 years ago - 1 comment

#65 - Tile DNA Synthesis Simulation

Issue - State: open - Opened by ericmjl almost 8 years ago - 15 comments

#64 - Goals for December 5-19

Issue - State: open - Opened by ericmjl almost 8 years ago

#63 - Primers arrived!

Issue - State: open - Opened by ericmjl almost 8 years ago - 2 comments

#62 - [DONE] added vivian's slides

Pull Request - State: open - Opened by ericmjl almost 8 years ago - 1 comment

#61 - [WIP] tiled synthesis simulation

Pull Request - State: closed - Opened by Starnite almost 8 years ago - 42 comments

#60 - [WIP] Data integrity checks

Pull Request - State: closed - Opened by Starnite almost 8 years ago - 3 comments

#59 - added primers for barcode insertion

Pull Request - State: closed - Opened by ericmjl almost 8 years ago

#58 - Vz mini pol assay cont

Pull Request - State: closed - Opened by Starnite almost 8 years ago - 3 comments

#57 - EM data processing bugfix

Pull Request - State: closed - Opened by ericmjl almost 8 years ago - 1 comment

#56 - Code Linter

Issue - State: open - Opened by ericmjl almost 8 years ago

#55 - Emvz pacbio test

Pull Request - State: open - Opened by Starnite almost 8 years ago

#54 - Vz data analysis

Pull Request - State: closed - Opened by Starnite almost 8 years ago

#53 - EM update primers

Pull Request - State: closed - Opened by ericmjl almost 8 years ago - 1 comment

#52 - Sample_name documentation

Pull Request - State: closed - Opened by Starnite almost 8 years ago

#51 - Vz goals

Pull Request - State: closed - Opened by Starnite about 8 years ago

#50 - Vz mini pol assay

Pull Request - State: closed - Opened by Starnite about 8 years ago - 3 comments

#49 - Meeting Notes 11/16

Issue - State: open - Opened by Starnite about 8 years ago

#48 - #goals

Pull Request - State: closed - Opened by Starnite about 8 years ago

#47 - Planned mini pol assay

Pull Request - State: closed - Opened by Starnite about 8 years ago - 1 comment

#46 - Updating notebook

Issue - State: closed - Opened by ericmjl about 8 years ago

#45 - Cell culture protocol updates

Pull Request - State: closed - Opened by Starnite about 8 years ago - 1 comment

#44 - Finished changing media

Issue - State: closed - Opened by ericmjl about 8 years ago

#43 - Updated schedule

Pull Request - State: closed - Opened by Starnite about 8 years ago

#42 - Recording passage number

Issue - State: closed - Opened by ericmjl about 8 years ago

#41 - fixed bad directory references in first transformation note

Pull Request - State: closed - Opened by ericmjl about 8 years ago

#40 - Clone random mutants of PB2

Pull Request - State: closed - Opened by ericmjl about 8 years ago - 2 comments

#39 - Goals for next two weeks

Pull Request - State: closed - Opened by Starnite about 8 years ago

#38 - Meeting Notes 10/13

Issue - State: closed - Opened by Starnite about 8 years ago - 2 comments

#37 - Sample Meeting Notes

Issue - State: open - Opened by ericmjl about 8 years ago

#36 - Vz retry update

Pull Request - State: closed - Opened by Starnite about 8 years ago

#35 - Updated with note of Tm not being recorded

Pull Request - State: closed - Opened by Starnite about 8 years ago - 1 comment

#34 - Vz cpec

Pull Request - State: closed - Opened by Starnite about 8 years ago - 4 comments

#33 - EM - restored gradient PCR report

Pull Request - State: closed - Opened by ericmjl about 8 years ago - 1 comment

#32 - EM - renamed the file to .csv

Pull Request - State: closed - Opened by ericmjl about 8 years ago - 1 comment

#31 - EM - removed replicate hackytaq data from temp-hackytaq directory

Pull Request - State: closed - Opened by ericmjl about 8 years ago

#30 - EM - repeat hackytaq

Pull Request - State: closed - Opened by ericmjl about 8 years ago - 6 comments

#29 - started cpec round 2

Pull Request - State: closed - Opened by ericmjl about 8 years ago

#28 - Added cpec reverse alignment

Pull Request - State: closed - Opened by Starnite about 8 years ago - 1 comment

#27 - Accessing ABI chromatogram data

Issue - State: closed - Opened by ericmjl about 8 years ago - 1 comment

#26 - Hacky-taq: replicate measurements

Issue - State: closed - Opened by ericmjl about 8 years ago

#25 - Added sequence, trace, and align files

Pull Request - State: closed - Opened by Starnite about 8 years ago - 1 comment

#24 - Hackytaq replicates

Pull Request - State: closed - Opened by ericmjl about 8 years ago - 1 comment

#23 - Extraneous notebook?

Issue - State: closed - Opened by ericmjl about 8 years ago - 2 comments

#22 - Lab Meeting Presentation

Issue - State: open - Opened by ericmjl about 8 years ago

#21 - Update to pymc3 RC2

Issue - State: open - Opened by ericmjl about 8 years ago

#20 - Goals for first fortnight of October

Pull Request - State: closed - Opened by Starnite about 8 years ago

#19 - added Luminescence Data

Pull Request - State: closed - Opened by Starnite about 8 years ago

#18 - Update 9/28

Pull Request - State: closed - Opened by Starnite about 8 years ago

#17 - Transformation of CPEC mix

Issue - State: closed - Opened by ericmjl about 8 years ago

#16 - gel extraction and dna concentration for A1

Pull Request - State: closed - Opened by Starnite about 8 years ago

#15 - MyTaq PCR with PB2 part 1

Pull Request - State: closed - Opened by Starnite about 8 years ago

#14 - Optional experiment - Manganese + MyTaq Red for mutagenesis

Issue - State: closed - Opened by ericmjl about 8 years ago - 1 comment

#13 - Mutagenesis on PB2 part 2

Issue - State: closed - Opened by ericmjl about 8 years ago - 1 comment

#12 - Using links

Issue - State: closed - Opened by ericmjl about 8 years ago

#11 - Various fixes

Pull Request - State: closed - Opened by Starnite about 8 years ago

#10 - Troubleshooting the PCR

Issue - State: closed - Opened by ericmjl about 8 years ago

#9 - Gel extraction and PCR with full PB2

Pull Request - State: closed - Opened by Starnite about 8 years ago

#8 - Filled in 2016-2017 Goals

Pull Request - State: closed - Opened by Starnite about 8 years ago

#7 - Added analysis of gel

Pull Request - State: closed - Opened by Starnite about 8 years ago

#6 - Added results of gel run

Pull Request - State: closed - Opened by Starnite about 8 years ago - 2 comments

#5 - Added gel electrophoresis order

Pull Request - State: closed - Opened by Starnite about 8 years ago

#4 - Added some clarification notes

Pull Request - State: closed - Opened by Starnite about 8 years ago

#3 - Added tube labels

Pull Request - State: closed - Opened by Starnite about 8 years ago - 1 comment

#2 - First mutagenesis experiment and sync shortcut

Pull Request - State: closed - Opened by Starnite about 8 years ago

#1 - Created 2016-2017 Goals

Pull Request - State: closed - Opened by Starnite about 8 years ago - 1 comment

GitHub / ericmjl/protein-systematic-characterization issues and pull requests