Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / epiverse-trace/finalsize issues and pull requests

#215 - Update `CITATION.cff`

Pull Request - State: closed - Opened by github-actions[bot] 4 months ago

#214 - Add benchmark_analyze() to touchstone script

Pull Request - State: closed - Opened by pratikunterwegs 4 months ago - 1 comment

#213 - Mid year cleanup

Issue - State: open - Opened by pratikunterwegs 4 months ago

#212 - Mid year cleanup

Pull Request - State: closed - Opened by pratikunterwegs 4 months ago - 2 comments

#211 - Re-enable backport linter

Pull Request - State: closed - Opened by pratikunterwegs 4 months ago - 1 comment

#210 - Initial touchstone infrastructure

Pull Request - State: closed - Opened by pratikunterwegs 4 months ago

#209 - Software permissions and regulations vignette

Issue - State: open - Opened by pratikunterwegs 4 months ago

#208 - Initial touchstone infrastructure

Pull Request - State: closed - Opened by pratikunterwegs 4 months ago - 1 comment

#207 - Add continuous benchmarking

Pull Request - State: closed - Opened by pratikunterwegs 4 months ago - 2 comments

#206 - Update test coverage workflow with global Codecov token

Pull Request - State: closed - Opened by pratikunterwegs 4 months ago

#205 - Fix pkgdown YAML

Pull Request - State: closed - Opened by pratikunterwegs 6 months ago

#204 - Increment to dev version 0.2.1.9000

Pull Request - State: closed - Opened by pratikunterwegs 6 months ago

#203 - Add CRAN submission file

Pull Request - State: closed - Opened by pratikunterwegs 6 months ago

#202 - Minor fixes for v0.2.1 release

Pull Request - State: closed - Opened by pratikunterwegs 6 months ago

#201 - Release finalsize 0.2.1

Issue - State: closed - Opened by pratikunterwegs 6 months ago

#200 - Release patch v0.2.1

Pull Request - State: closed - Opened by pratikunterwegs 6 months ago - 1 comment
Labels: Documentation

#199 - Update wordlist and fix spelling

Pull Request - State: closed - Opened by pratikunterwegs 6 months ago

#198 - Show new vignettes on release website

Issue - State: closed - Opened by pratikunterwegs 6 months ago - 1 comment
Labels: Documentation

#197 - Add a continuous benchmarking workflow

Issue - State: closed - Opened by pratikunterwegs 7 months ago

#196 - `final_size()` should accept a vector of R0

Issue - State: open - Opened by pratikunterwegs 7 months ago - 12 comments
Labels: New feature, Discussion

#195 - Fix ORCID links

Pull Request - State: closed - Opened by chartgerink 8 months ago

#194 - Vignette on re-emergence risk from demographic turnover and waning

Pull Request - State: closed - Opened by adamkucharski 8 months ago - 2 comments

#193 - Theoretical background

Pull Request - State: closed - Opened by adamkucharski 8 months ago - 3 comments

#192 - Add defaults to final_size()

Pull Request - State: closed - Opened by pratikunterwegs 9 months ago

#191 - Restore linter workflow

Pull Request - State: closed - Opened by pratikunterwegs 9 months ago

#190 - Update README and Get started

Pull Request - State: closed - Opened by adamkucharski 9 months ago

#189 - Update release website

Pull Request - State: closed - Opened by pratikunterwegs 10 months ago

#188 - Update site with epiversetheme

Issue - State: closed - Opened by pratikunterwegs 10 months ago - 1 comment

#187 - End of year cleanup

Pull Request - State: closed - Opened by pratikunterwegs 10 months ago - 2 comments

#186 - End of year cleanup

Issue - State: closed - Opened by pratikunterwegs 10 months ago

#185 - Add CITATION.cff

Pull Request - State: closed - Opened by Bisaloo 10 months ago - 3 comments

#184 - Temporarily disable backport linter

Issue - State: open - Opened by pratikunterwegs 11 months ago - 2 comments

#183 - Update .lintr from pkgtemplate

Pull Request - State: closed - Opened by pratikunterwegs 11 months ago - 1 comment

#182 - Switch to epiversetheme

Pull Request - State: closed - Opened by Bisaloo 11 months ago - 1 comment

#181 - Update package infrastucture files

Issue - State: closed - Opened by pratikunterwegs 11 months ago
Labels: good first issue, Cleanup

#180 - Easy route to homogenous estimate

Issue - State: closed - Opened by adamkucharski 11 months ago - 4 comments
Labels: good first issue

#179 - Fix Reff LaTeX formatting

Pull Request - State: closed - Opened by Bisaloo 11 months ago - 3 comments

#178 - Fix broken link

Pull Request - State: closed - Opened by pratikunterwegs about 1 year ago

#177 - Correct link to heterogeneous contacts vignette

Issue - State: closed - Opened by pratikunterwegs about 1 year ago
Labels: Bug, Documentation

#176 - Describe the underlying maths and numerical implementations in vignette

Issue - State: open - Opened by TimTaylor about 1 year ago - 6 comments
Labels: Documentation, Help wanted

#175 - Use LMIC examples in vignettes

Issue - State: closed - Opened by pratikunterwegs about 1 year ago
Labels: Documentation

#174 - Remove pkgs used only in development

Pull Request - State: closed - Opened by Bisaloo over 1 year ago

#173 - Add DPG logo

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago

#172 - Add DPG badge

Issue - State: closed - Opened by pratikunterwegs over 1 year ago
Labels: Documentation

#171 - Fix NEWS formatting

Pull Request - State: closed - Opened by Bisaloo over 1 year ago - 1 comment

#170 - Post-CRAN acceptance v0.2

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago

#169 - Minor fixes pre v0.2 release

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago

#168 - rename the r0_to_lambda() function title

Issue - State: closed - Opened by avallecam over 1 year ago - 1 comment

#167 - rename r_eff() function title

Issue - State: closed - Opened by avallecam over 1 year ago

#166 - Add Roz as contributor

Pull Request - State: closed - Opened by rozeggo over 1 year ago

#165 - Add Andree details as contributor

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago - 2 comments

#164 - Reviewer role added to DESCRIPTION

Pull Request - State: closed - Opened by joshwlambert over 1 year ago
Labels: Documentation

#163 - Release finalsize 0.2.0

Issue - State: closed - Opened by pratikunterwegs over 1 year ago - 2 comments

#162 - Test statistical correctness for no-between group contacts

Issue - State: open - Opened by pratikunterwegs over 1 year ago
Labels: Documentation, Quality control

#161 - Full package review for v0.2.0 release

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago - 6 comments
Labels: Full review

#160 - Add contributor details

Issue - State: closed - Opened by pratikunterwegs over 1 year ago - 3 comments
Labels: Documentation

#159 - Miscellaneous fixes and additions

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago
Labels: Documentation, Cleanup

#158 - Add a lifecycle badge

Issue - State: closed - Opened by pratikunterwegs over 1 year ago - 1 comment
Labels: Documentation, Discussion

#156 - Using CSL-JSON for citations

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago
Labels: Documentation

#155 - Use CSL-JSON for citations

Issue - State: closed - Opened by pratikunterwegs over 1 year ago
Labels: Documentation, Cleanup

#154 - Ignore vignettes for repo langs stats

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago

#153 - Vignette comparing finalsize with SIR model

Issue - State: closed - Opened by pratikunterwegs over 1 year ago
Labels: Documentation, Quality control

#152 - R_eff and R_0 <-> lambda conversions

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago
Labels: New feature

#151 - Add function for R_eff

Issue - State: closed - Opened by pratikunterwegs over 1 year ago
Labels: New feature

#150 - Allow C++ code sharing

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago - 1 comment
Labels: New feature, Cleanup

#149 - Delete lint-changed-files.yaml

Pull Request - State: closed - Opened by Bisaloo over 1 year ago

#148 - Render dev version of website

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago

#147 - Render dev and release documentation

Issue - State: closed - Opened by pratikunterwegs over 1 year ago
Labels: Documentation

#146 - Allow finalsize C++ code sharing

Issue - State: closed - Opened by pratikunterwegs over 1 year ago
Labels: Documentation, New feature, Cleanup

#145 - Replace links in contributing page

Issue - State: closed - Opened by avallecam over 1 year ago - 1 comment
Labels: Documentation, question

#144 - Add vignette with five case examples of susceptibility matrices

Pull Request - State: closed - Opened by avallecam over 1 year ago - 6 comments
Labels: Documentation

#143 - Simplify "Get started" vignette

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago - 2 comments
Labels: Documentation

#142 - Single demography group with uniform mixing

Issue - State: closed - Opened by pratikunterwegs over 1 year ago
Labels: Documentation, New feature

#141 - Correct vignette, fixes #140

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago

#140 - Compact output dataframe in vignette

Issue - State: closed - Opened by pratikunterwegs over 1 year ago
Labels: Documentation, Cleanup

#139 - Replace `n_demo_grps` object name across vignettes

Issue - State: closed - Opened by avallecam over 1 year ago - 1 comment

#138 - Add tab to run final_size() over samples using {purrr}

Issue - State: closed - Opened by avallecam over 1 year ago - 1 comment
Labels: Documentation, New feature

#137 - Add links to vignettes in "New to finalsize?" box

Issue - State: closed - Opened by avallecam over 1 year ago
Labels: Documentation, Cleanup

#136 - Replace “Basic usage” by “Get started”

Issue - State: closed - Opened by avallecam over 1 year ago
Labels: Cleanup

#135 - Change to ggplot facet_grid() to compare two susceptibility variations

Issue - State: closed - Opened by avallecam over 1 year ago
Labels: Cleanup

#134 - Remove configuration lines of ggplot2 visualizations

Issue - State: closed - Opened by avallecam over 1 year ago - 2 comments
Labels: wontfix, Cleanup

#133 - Move the section “order demographic groups” to the Viz code section

Issue - State: closed - Opened by avallecam over 1 year ago
Labels: Documentation

#132 - Correct examples, vignettes, tests to use real eigenvalues

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago

#131 - Imaginary numbers when obtaining eigenvalues and eigen-vectors

Issue - State: closed - Opened by erees over 1 year ago - 2 comments
Labels: Bug, Documentation

#130 - Add reference links to sources of heterogeneous susceptibility

Issue - State: closed - Opened by avallecam over 1 year ago - 4 comments
Labels: Documentation, Discussion

#129 - Replace the text line in code chunk about immunisation rate

Issue - State: closed - Opened by avallecam over 1 year ago - 1 comment
Labels: Cleanup

#128 - Add a vignette with examples for the two susceptibility-related matrices

Issue - State: closed - Opened by avallecam over 1 year ago - 3 comments
Labels: Documentation

#127 - Add input and output object names in code to show how they looks like

Issue - State: closed - Opened by avallecam over 1 year ago - 1 comment
Labels: Documentation

#126 - Add brief explaination about the matrix operations

Issue - State: open - Opened by avallecam over 1 year ago - 5 comments
Labels: Documentation, Help wanted, question

#125 - Replace the age groups notation only in text, but not in code

Issue - State: closed - Opened by avallecam over 1 year ago
Labels: Cleanup

#124 - Replace the POLYMOD reference link

Issue - State: closed - Opened by avallecam over 1 year ago
Labels: Cleanup

#123 - Change how to load external packages in vignettes

Issue - State: closed - Opened by avallecam over 1 year ago - 4 comments
Labels: Cleanup, Discussion

#122 - Remove the installation step in Get started vignette

Issue - State: closed - Opened by avallecam over 1 year ago
Labels: Cleanup

#121 - Improve documentation and argument order

Pull Request - State: closed - Opened by pratikunterwegs over 1 year ago - 6 comments

#120 - Add vignette or tab section for videos or external use cases

Issue - State: open - Opened by avallecam over 1 year ago - 1 comment
Labels: Documentation

#119 - Replace argument names of “susceptibility” and “p_susceptibility”

Issue - State: closed - Opened by avallecam over 1 year ago - 4 comments
Labels: New feature, Discussion

#118 - Change order of arguments in the final_size() function

Issue - State: closed - Opened by avallecam over 1 year ago - 1 comment
Labels: New feature, Discussion

#117 - Replace installation step of development version

Issue - State: closed - Opened by avallecam over 1 year ago - 1 comment
Labels: Cleanup

#116 - About introductory paragraph in README

Issue - State: closed - Opened by avallecam over 1 year ago - 8 comments
Labels: Documentation, question, Discussion