Ecosyste.ms: Issues

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GitHub / eldariont/svim-asm issues and pull requests

#27 - How can I get the end position of a translocation?

Issue - State: open - Opened by qizhengyang2017 about 2 months ago

#26 - Parameters for long SV detection

Issue - State: open - Opened by MariosGvr 11 months ago

#25 - Sequence "X" not present

Issue - State: closed - Opened by RenscoHogers about 1 year ago - 1 comment

#23 - Output a contig-size large SV

Issue - State: open - Opened by hangsuUNC over 1 year ago

#22 - Option to output insertion/deletion coordinates in query sequence?

Issue - State: open - Opened by cizydorczyk over 1 year ago - 1 comment

#21 - identify quite different SVs from two software

Issue - State: open - Opened by aaannaw almost 2 years ago

#20 - Any option to keep the signature/internal results?

Issue - State: open - Opened by LYC-vio over 2 years ago

#19 - QUAL filtering

Issue - State: open - Opened by RasmusBuntzen over 2 years ago

#18 - Upper limit of the SV length

Issue - State: closed - Opened by MehmetGoktay over 2 years ago - 1 comment

#17 - Issues of calling from lra alignments

Issue - State: open - Opened by jiadong324 over 2 years ago

#16 - No Duplications output

Issue - State: open - Opened by hhuili over 2 years ago

#15 - Multiple records in the same position

Issue - State: open - Opened by zhqduan almost 3 years ago - 1 comment

#14 - Query genome positions

Issue - State: open - Opened by Murukarthick almost 3 years ago

#13 - Calling SNPs with svim-asm?

Issue - State: open - Opened by cgroza almost 3 years ago - 1 comment

#12 - Phased genotype in VCF?

Issue - State: closed - Opened by hsiehph almost 3 years ago - 2 comments

#11 - Co-ordinates of break in query genome

Issue - State: closed - Opened by burnsro about 3 years ago - 2 comments

#10 - quality and sequence mismatch

Issue - State: closed - Opened by masen0407 over 3 years ago - 9 comments

#9 - svim-asm on multiple samples

Issue - State: open - Opened by dfguan over 3 years ago - 4 comments

#8 - error: CIGAR length too long at position 1

Issue - State: closed - Opened by atongsa over 3 years ago - 5 comments

#7 - -r2k

Issue - State: closed - Opened by atongsa over 3 years ago - 1 comment

#6 - Low number of interspersed duplications?

Issue - State: open - Opened by GuillaumeHolley over 3 years ago - 1 comment

#5 - OverflowError: value too large to convert to uint32_t

Issue - State: closed - Opened by jxlabWzZ over 3 years ago - 10 comments

#4 - svim-asm for bacterial genome

Issue - State: closed - Opened by rthapa1 over 3 years ago - 1 comment

#3 - MAF alignments format

Issue - State: closed - Opened by biozzq over 3 years ago - 1 comment

#2 - can SVIM-asm used for polyploid assembly

Issue - State: closed - Opened by zhen0506 over 3 years ago - 5 comments

#1 - using more than 64G RAM

Issue - State: closed - Opened by cschin almost 4 years ago - 3 comments