ed-lau/jcast issues and pull requests

#25 - Accessing the splice_type optional argument

Issue - State: open - Opened by mrcaleb01 3 months ago - 3 comments

#24 - genome file

Issue - State: open - Opened by naqvia 9 months ago - 1 comment

#23 - Sequence not cached locally

Issue - State: closed - Opened by clin888 about 1 year ago

#22 - sklearn is now depreciated

Issue - State: closed - Opened by avalreyes about 1 year ago

#18 - ORF error?

Issue - State: open - Opened by moschmi over 1 year ago - 14 comments

#17 - output issue

Issue - State: closed - Opened by wexlerjin almost 2 years ago - 2 comments

#16 - not found

Issue - State: closed - Opened by naqvia almost 2 years ago - 9 comments

#15 - MXE output header

Issue - State: closed - Opened by pravsaz almost 2 years ago - 1 comment

#14 - Parallel execution of JCAST

Issue - State: closed - Opened by n-hackert about 2 years ago - 2 comments

#13 - Pvalue filtering

Issue - State: closed - Opened by OlgaVT over 2 years ago - 1 comment

#12 - Alternative splicing (AS) events combination

Issue - State: closed - Opened by OlgaVT over 2 years ago - 2 comments

#11 - KeyError: 'XXX' When Processing MXE Junctions

Issue - State: closed - Opened by huangwb8 almost 3 years ago - 10 comments

#10 - Feature request: incorporation of SNPs

Issue - State: open - Opened by rsalz over 3 years ago - 1 comment

#9 - Installing jcast and dependencies without 'sudo'.

Issue - State: closed - Opened by mranjan1 over 3 years ago - 3 comments

#8 - Gencode transcript biotype

Issue - State: open - Opened by ed-lau over 3 years ago - 1 comment

#7 - Bio.Alphabet has been removed from Biopython

Issue - State: closed - Opened by GundryLab over 3 years ago - 11 comments

#6 - README file

Issue - State: closed - Opened by malbahrani almost 4 years ago - 1 comment

#5 - Key error

Issue - State: closed - Opened by xpgege almost 4 years ago - 5 comments

#4 - sorting by transcript support level with non-mouse non-human species

Issue - State: closed - Opened by rpm78 about 4 years ago - 2 comments

#3 - gtfparse call

Issue - State: closed - Opened by rpm78 about 4 years ago - 1 comment

#2 - Is it possible to run jcast with species other than human and mouse?

Issue - State: closed - Opened by rpm78 about 4 years ago - 4 comments

#1 - Is it possible to run jcast with splicing events that are not from rMATS ?

Issue - State: closed - Opened by gouthamatla over 4 years ago - 2 comments

Ecosyste.ms: Issues

GitHub / ed-lau/jcast issues and pull requests