ecohealthalliance/annie issues and pull requests

#49 - Add travis file, apply autopep8 formatting, remove unused annotators

Pull Request - State: closed - Opened by nathanathan almost 8 years ago

#48 - Detect singular counts and remove pattern lib

Pull Request - State: closed - Opened by nathanathan almost 8 years ago - 1 comment

#47 - Optimize geoname annotator

Pull Request - State: closed - Opened by nathanathan almost 8 years ago

#46 - Fix too many variables bug on large articles

Pull Request - State: closed - Opened by nathanathan almost 8 years ago

#45 - Contextual geoname features

Pull Request - State: closed - Opened by nathanathan almost 8 years ago - 1 comment

#44 - Add disease ontology based keyword resolver

Pull Request - State: closed - Opened by nathanathan almost 8 years ago - 1 comment

#43 - Remove pattern lib searches from count annotator

Pull Request - State: closed - Opened by nathanathan almost 8 years ago

#42 - Pattern bug fix and code cleanup

Pull Request - State: closed - Opened by nathanathan almost 8 years ago - 1 comment

#41 - Speed up JVM requests and fix a broken test

Pull Request - State: closed - Opened by nathanathan about 8 years ago

#40 - Refactor geoname annotator to use embedded sqlite3 DB

Pull Request - State: closed - Opened by nathanathan about 8 years ago

#39 - Fix empty list ra.follows bug

Pull Request - State: closed - Opened by nathanathan about 8 years ago

#38 - Add count annotator

Pull Request - State: closed - Opened by nathanathan over 8 years ago

#37 - Refactor and simplify geoannotator code

Pull Request - State: closed - Opened by nathanathan over 8 years ago

#36 - Add NLTK download of required packages

Pull Request - State: closed - Opened by sjmatta over 8 years ago - 3 comments

#35 - Add required packages to setup.py

Pull Request - State: closed - Opened by sjmatta over 8 years ago - 5 comments

#34 - Fix '2 ** 32 is not an integer' error on Windows during Mongo Geonames import

Pull Request - State: closed - Opened by sjmatta over 8 years ago - 1 comment

#33 - Refactor annie to allow to a newer mongodb located in a separate container

Pull Request - State: closed - Opened by frosario almost 9 years ago - 1 comment

#32 - Applying hyphen replacement to AnnoDoc.text

Pull Request - State: closed - Opened by nathanathan over 9 years ago - 1 comment

#31 - Processing exception

Issue - State: closed - Opened by nathanathan over 9 years ago

#30 - Adding tests for stanford NER

Pull Request - State: closed - Opened by nathanathan over 9 years ago

#29 - Mysterious word association exceptions on prod

Issue - State: closed - Opened by nathanathan about 10 years ago

#28 - Fix tests

Pull Request - State: closed - Opened by mrjf about 10 years ago - 1 comment

#27 - add handling of case sensitivity for keywords and test

Pull Request - State: closed - Opened by mrjf about 10 years ago

#26 - Make label and type from JVM-NLP optional.

Pull Request - State: closed - Opened by aslagle over 10 years ago - 4 comments

#25 - import_geonames calls missing script

Issue - State: closed - Opened by aslagle over 10 years ago - 3 comments

#24 - Both a time and an age may be extracted from the same span in patient info

Issue - State: closed - Opened by mrjf over 10 years ago - 1 comment

#23 - We should use MWIS approach to filter overlapping spans

Issue - State: closed - Opened by mrjf over 10 years ago

#22 - multi-highlight

Pull Request - State: closed - Opened by mrjf over 10 years ago - 2 comments

#21 - added profiling to all annotators

Pull Request - State: closed - Opened by mrjf over 10 years ago - 3 comments

#20 - Count all space characters when parsing pattern tree for offsets.

Pull Request - State: closed - Opened by aslagle over 10 years ago - 1 comment

#19 - Fixes for a keypoints bug and geoannotator bug

Pull Request - State: closed - Opened by nathanathan over 10 years ago

#18 - Fixing cyclic parent location bug

Pull Request - State: closed - Opened by nathanathan over 10 years ago

#17 - Revert "import scripts for country_info"

Pull Request - State: closed - Opened by nathanathan over 10 years ago

#16 - annotator for keywords (diseases, hosts, modes, pathogens and symptoms)

Pull Request - State: closed - Opened by mrjf over 10 years ago - 1 comment

#15 - Adding Timex3 time ranges, sets, modifiers

Pull Request - State: closed - Opened by mrjf over 10 years ago - 1 comment

#14 - Fixing off by one error

Pull Request - State: closed - Opened by nathanathan over 10 years ago

#13 - import scripts for country_info

Pull Request - State: closed - Opened by mrjf over 10 years ago

#12 - Patient info enhancements

Pull Request - State: closed - Opened by nathanathan over 10 years ago - 1 comment

#11 - Patient info extraction bugs fixes

Pull Request - State: closed - Opened by nathanathan over 10 years ago - 3 comments

#10 - Next release

Pull Request - State: closed - Opened by nathanathan over 10 years ago

#9 - fixes to json serialization needed for datetime annotation procedure

Pull Request - State: closed - Opened by mrjf over 10 years ago

#8 - result_aggregators.combine bug

Issue - State: closed - Opened by nathanathan over 10 years ago

#7 - New features for the annotator scoring function

Issue - State: closed - Opened by nathanathan over 10 years ago - 1 comment

#6 - Geoannotator is picking up names from URLs

Issue - State: closed - Opened by nathanathan over 10 years ago

#5 - Jvmnlp

Pull Request - State: closed - Opened by mrjf over 10 years ago - 5 comments

#4 - Adding patient info annotator

Pull Request - State: closed - Opened by nathanathan over 10 years ago - 1 comment

#3 - Enhancing geoannotator

Pull Request - State: closed - Opened by nathanathan over 10 years ago - 4 comments

#2 - Replace print statements with logging

Issue - State: closed - Opened by nathanathan over 10 years ago - 2 comments

#1 - Add location extractor test data to repository

Issue - State: closed - Opened by nathanathan over 10 years ago - 2 comments

GitHub / ecohealthalliance/annie issues and pull requests