Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / ebi-pf-team/interproscan issues and pull requests
#362 - when run the interproscan, its error like this perl: symbol lookup error: /usr/lib64/perl5/auto/IO/IO.so: undefined symbol: Perl_xs_apiversion_bootcheck
Issue -
State: open - Opened by Jiangjiangzhang6 5 months ago
#361 - assorted errors
Issue -
State: open - Opened by jasonwjohns 5 months ago
#360 - Command line Flag indicating the DataBase path?
Issue -
State: closed - Opened by cmeesters 5 months ago
- 3 comments
#359 - Subcellular location (cellular component) instead of GO terms
Issue -
State: closed - Opened by SauravSreejith28 5 months ago
- 3 comments
#358 - InterProScan issue (FATAL ERROR)
Issue -
State: closed - Opened by ValeroGracia 5 months ago
- 1 comment
#357 - Lookup service gives false negative - gives empty hits when there should be (v. 5.66-98.0)
Issue -
State: open - Opened by cmunk 5 months ago
- 6 comments
#356 - Possibility to run whole genome protein domain scanning?
Issue -
State: closed - Opened by BitaoQiu 6 months ago
- 1 comment
#355 - does not recognize hmmpress-generated aux files.
Issue -
State: closed - Opened by Arkadiy-Garber 6 months ago
- 9 comments
#354 - singularity run error
Issue -
State: closed - Opened by smoothyly 6 months ago
- 4 comments
#353 - Error with pfsearchV3 after installing pcre2 and pftools3
Issue -
State: open - Opened by asupandy 7 months ago
- 5 comments
#352 - Ibu-10728
Pull Request -
State: closed - Opened by HobnobMancer 7 months ago
#351 - Bump org.apache.commons:commons-compress from 1.21 to 1.26.0 in /core/management
Pull Request -
State: closed - Opened by dependabot[bot] 7 months ago
- 1 comment
Labels: dependencies
#350 - Fix hmmer SSI index failure for Superfamily and SFLD
Pull Request -
State: closed - Opened by tgrego 8 months ago
#349 - Results differ between web-interface and interproscan.sh
Issue -
State: closed - Opened by nschan 8 months ago
- 1 comment
#348 - Bump org.springframework:spring-core from 5.2.24.RELEASE to 6.0.15 in /core
Pull Request -
State: closed - Opened by dependabot[bot] 8 months ago
- 1 comment
Labels: dependencies
#347 - Inquiry on the interproscan.properties file
Issue -
State: closed - Opened by sanalbert 10 months ago
- 1 comment
#346 - interproscan.sh not submitting worker jobs with `-mode cluster` option with LSF
Issue -
State: closed - Opened by Lfulcrum 10 months ago
- 6 comments
#345 - Implementation of Prosite and Panther
Issue -
State: closed - Opened by suz11001 10 months ago
- 1 comment
#344 - How can I speed it up ?
Issue -
State: open - Opened by qkqk-hub 10 months ago
#344 - How can I speed it up ?
Issue -
State: open - Opened by qkqk-hub 10 months ago
#344 - How can I speed it up ?
Issue -
State: closed - Opened by qkqk-hub 10 months ago
- 4 comments
#344 - How can I speed it up ?
Issue -
State: open - Opened by qkqk-hub 10 months ago
#343 - Default parameter values on web interface?
Issue -
State: open - Opened by suz11001 10 months ago
- 4 comments
#342 - results that go missing when the protein sequence is made longer (or software version changes)
Issue -
State: open - Opened by krabapple 11 months ago
- 1 comment
#341 - error run InterProScan5.63-95 with Singularity Container
Issue -
State: closed - Opened by Liyong-Zhang 11 months ago
- 2 comments
#341 - error run InterProScan5.63-95 with Singularity Container
Issue -
State: closed - Opened by Liyong-Zhang 11 months ago
- 2 comments
#341 - error run InterProScan5.63-95 with Singularity Container
Issue -
State: closed - Opened by Liyong-Zhang 11 months ago
- 2 comments
#340 - Is it possible to extract representative domains from an interpro-scan run?
Issue -
State: closed - Opened by steven-pilger 12 months ago
- 5 comments
#340 - Is it possible to extract representative domains from an interpro-scan run?
Issue -
State: open - Opened by steven-pilger 12 months ago
- 3 comments
#339 - installation issue
Issue -
State: open - Opened by schmidoletti 12 months ago
- 1 comment
#339 - installation issue
Issue -
State: open - Opened by schmidoletti 12 months ago
- 1 comment
#339 - installation issue
Issue -
State: open - Opened by schmidoletti 12 months ago
- 1 comment
#339 - installation issue
Issue -
State: open - Opened by schmidoletti 12 months ago
- 1 comment
#338 - Error running InterProScan (Unable to access jarfile interproscan-5.jar)
Issue -
State: closed - Opened by D-Git-Bit 12 months ago
- 1 comment
#338 - Error running InterProScan (Unable to access jarfile interproscan-5.jar)
Issue -
State: closed - Opened by D-Git-Bit 12 months ago
- 1 comment
#338 - Error running InterProScan (Unable to access jarfile interproscan-5.jar)
Issue -
State: closed - Opened by D-Git-Bit 12 months ago
- 1 comment
#338 - Error running InterProScan (Unable to access jarfile interproscan-5.jar)
Issue -
State: closed - Opened by D-Git-Bit 12 months ago
- 1 comment
#337 - Custom database path
Issue -
State: closed - Opened by mesti90 12 months ago
- 1 comment
#337 - Custom database path
Issue -
State: closed - Opened by mesti90 12 months ago
- 1 comment
#337 - Custom database path
Issue -
State: closed - Opened by mesti90 12 months ago
- 1 comment
#336 - Error in mobidb: invalid next size
Issue -
State: closed - Opened by xingjianfeng100 12 months ago
- 2 comments
#335 - Pfam-N in InterProScan command line?
Issue -
State: closed - Opened by photocyte 12 months ago
- 1 comment
#335 - Pfam-N in InterProScan command line?
Issue -
State: closed - Opened by photocyte 12 months ago
- 1 comment
#335 - Pfam-N in InterProScan command line?
Issue -
State: closed - Opened by photocyte 12 months ago
- 1 comment
#335 - Pfam-N in InterProScan command line?
Issue -
State: closed - Opened by photocyte 12 months ago
- 1 comment
#335 - Pfam-N in InterProScan command line?
Issue -
State: closed - Opened by photocyte 12 months ago
- 1 comment
#334 - Interproscan XML produces go-xref without a category
Issue -
State: closed - Opened by aldendirks about 1 year ago
- 1 comment
#333 - interproscan not recognizing fasta format
Issue -
State: closed - Opened by amsamani about 1 year ago
- 1 comment
#333 - interproscan not recognizing fasta format
Issue -
State: closed - Opened by amsamani about 1 year ago
- 1 comment
#333 - interproscan not recognizing fasta format
Issue -
State: closed - Opened by amsamani about 1 year ago
- 1 comment
#333 - interproscan not recognizing fasta format
Issue -
State: closed - Opened by amsamani about 1 year ago
- 1 comment
#332 - test completes successfully but real data crashes . . .
Issue -
State: closed - Opened by benyoung93 about 1 year ago
- 2 comments
#332 - test completes successfully but real data crashes . . .
Issue -
State: closed - Opened by benyoung93 about 1 year ago
- 2 comments
#332 - test completes successfully but real data crashes . . .
Issue -
State: closed - Opened by benyoung93 about 1 year ago
- 2 comments
#331 - error while loading shared libraries: libpcre2-8.so.0: cannot open shared object file: No such file or directory
Issue -
State: closed - Opened by alexvasilikop about 1 year ago
- 2 comments
#331 - error while loading shared libraries: libpcre2-8.so.0: cannot open shared object file: No such file or directory
Issue -
State: closed - Opened by alexvasilikop about 1 year ago
- 2 comments
#331 - error while loading shared libraries: libpcre2-8.so.0: cannot open shared object file: No such file or directory
Issue -
State: closed - Opened by alexvasilikop about 1 year ago
- 2 comments
#330 - Docker image
Issue -
State: closed - Opened by multimeric about 1 year ago
- 2 comments
#330 - Docker image
Issue -
State: closed - Opened by multimeric about 1 year ago
- 2 comments
#329 - Alternative FPT sites?
Issue -
State: closed - Opened by spitfiredd over 1 year ago
- 2 comments
#329 - Alternative FPT sites?
Issue -
State: closed - Opened by spitfiredd over 1 year ago
- 2 comments
#329 - Alternative FPT sites?
Issue -
State: closed - Opened by spitfiredd over 1 year ago
- 2 comments
#328 - Bump guava from 29.0-jre to 32.0.0-jre in /core
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies
#328 - Bump guava from 29.0-jre to 32.0.0-jre in /core
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies
#328 - Bump guava from 29.0-jre to 32.0.0-jre in /core
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies
#327 - update ncbifam to 12.0
Pull Request -
State: closed - Opened by laisecf over 1 year ago
#327 - update ncbifam to 12.0
Pull Request -
State: closed - Opened by laisecf over 1 year ago
#327 - update ncbifam to 12.0
Pull Request -
State: closed - Opened by laisecf over 1 year ago
#327 - update ncbifam to 12.0
Pull Request -
State: closed - Opened by laisecf over 1 year ago
#326 - Incorrect downloads under 'Releases'?
Issue -
State: closed - Opened by Ghepardo over 1 year ago
- 1 comment
#326 - Incorrect downloads under 'Releases'?
Issue -
State: closed - Opened by Ghepardo over 1 year ago
- 1 comment
#326 - Incorrect downloads under 'Releases'?
Issue -
State: closed - Opened by Ghepardo over 1 year ago
- 1 comment
#326 - Incorrect downloads under 'Releases'?
Issue -
State: closed - Opened by Ghepardo over 1 year ago
- 1 comment
#326 - Incorrect downloads under 'Releases'?
Issue -
State: closed - Opened by Ghepardo over 1 year ago
- 1 comment
#325 - Interpro uses more CPUs than I specified:
Issue -
State: closed - Opened by sbthandras over 1 year ago
- 1 comment
#325 - Interpro uses more CPUs than I specified:
Issue -
State: closed - Opened by sbthandras over 1 year ago
- 1 comment
#324 - hmmscan step only used 1 cpu
Issue -
State: closed - Opened by zhan4429 over 1 year ago
- 2 comments
#323 - [1]+ Exit 231 ERROR - Command line failed with exit code: 1
Issue -
State: closed - Opened by Neo-xbx-00 over 1 year ago
- 4 comments
#322 - line 61: 668576 Killed
Issue -
State: closed - Opened by dylan33smith over 1 year ago
- 1 comment
#321 - Bump jetty-server from 11.0.10 to 11.0.14 in /core/precalcmatches/server
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies
#320 - Bump jetty-server from 11.0.10 to 11.0.14 in /core/web
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies
#319 - Bump spring-core from 5.2.22.RELEASE to 5.2.24.RELEASE in /core
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies
#318 - Large File Space Causing Issues Running InterProScan
Issue -
State: closed - Opened by rghosh670 over 1 year ago
- 1 comment
#317 - different results between InterPro and InterProScan
Issue -
State: closed - Opened by sjfleck over 1 year ago
- 2 comments
#316 - Bump spring-core from 5.2.22.RELEASE to 5.2.23.RELEASE in /core
Pull Request -
State: closed - Opened by dependabot[bot] over 1 year ago
- 1 comment
Labels: dependencies
#315 - SyntaxError: invalid imaginary literal
Issue -
State: closed - Opened by sjfleck over 1 year ago
- 1 comment
#315 - SyntaxError: invalid imaginary literal
Issue -
State: closed - Opened by sjfleck over 1 year ago
- 1 comment
#314 - Error exit codes:1 and 25
Issue -
State: closed - Opened by GiuseppePin over 1 year ago
- 3 comments
#313 - Error when trying to use interproscan on cluster
Issue -
State: open - Opened by Cyaneis over 1 year ago
#313 - Error when trying to use interproscan on cluster
Issue -
State: open - Opened by Cyaneis over 1 year ago
#312 - Error reported with fingerPRINTScan on test data following conda install
Issue -
State: open - Opened by TMAdams over 1 year ago
#312 - Error reported with fingerPRINTScan on test data following conda install
Issue -
State: open - Opened by TMAdams over 1 year ago
#311 - Error when running TMHMM with Interproscan-5.60-92.0
Issue -
State: open - Opened by krostifangers over 1 year ago
#311 - Error when running TMHMM with Interproscan-5.60-92.0
Issue -
State: open - Opened by krostifangers over 1 year ago
#310 - WARN - Ignoring line with unexpected format
Issue -
State: open - Opened by marketavlkova over 1 year ago
- 5 comments
#310 - WARN - Ignoring line with unexpected format
Issue -
State: open - Opened by marketavlkova over 1 year ago
- 5 comments
#309 - Change in GO term reported in XML files
Issue -
State: closed - Opened by hyphaltip over 1 year ago
- 1 comment
#309 - Change in GO term reported in XML files
Issue -
State: open - Opened by hyphaltip over 1 year ago
- 1 comment
#308 - Self-suppression not permitted
Issue -
State: open - Opened by theo-allnutt-bioinformatics over 1 year ago
- 3 comments
#308 - Self-suppression not permitted
Issue -
State: open - Opened by theo-allnutt-bioinformatics over 1 year ago
- 3 comments