Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / ebi-pf-team/interproscan issues and pull requests

#361 - assorted errors

Issue - State: open - Opened by jasonwjohns 5 months ago

#360 - Command line Flag indicating the DataBase path?

Issue - State: closed - Opened by cmeesters 5 months ago - 3 comments

#359 - Subcellular location (cellular component) instead of GO terms

Issue - State: closed - Opened by SauravSreejith28 5 months ago - 3 comments

#358 - InterProScan issue (FATAL ERROR)

Issue - State: closed - Opened by ValeroGracia 5 months ago - 1 comment

#356 - Possibility to run whole genome protein domain scanning?

Issue - State: closed - Opened by BitaoQiu 6 months ago - 1 comment

#355 - does not recognize hmmpress-generated aux files.

Issue - State: closed - Opened by Arkadiy-Garber 6 months ago - 9 comments

#354 - singularity run error

Issue - State: closed - Opened by smoothyly 6 months ago - 4 comments

#353 - Error with pfsearchV3 after installing pcre2 and pftools3

Issue - State: open - Opened by asupandy 7 months ago - 5 comments

#352 - Ibu-10728

Pull Request - State: closed - Opened by HobnobMancer 7 months ago

#351 - Bump org.apache.commons:commons-compress from 1.21 to 1.26.0 in /core/management

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 1 comment
Labels: dependencies

#350 - Fix hmmer SSI index failure for Superfamily and SFLD

Pull Request - State: closed - Opened by tgrego 8 months ago

#349 - Results differ between web-interface and interproscan.sh

Issue - State: closed - Opened by nschan 8 months ago - 1 comment

#348 - Bump org.springframework:spring-core from 5.2.24.RELEASE to 6.0.15 in /core

Pull Request - State: closed - Opened by dependabot[bot] 8 months ago - 1 comment
Labels: dependencies

#347 - Inquiry on the interproscan.properties file

Issue - State: closed - Opened by sanalbert 10 months ago - 1 comment

#345 - Implementation of Prosite and Panther

Issue - State: closed - Opened by suz11001 10 months ago - 1 comment

#344 - How can I speed it up ?

Issue - State: open - Opened by qkqk-hub 10 months ago

#344 - How can I speed it up ?

Issue - State: open - Opened by qkqk-hub 10 months ago

#344 - How can I speed it up ?

Issue - State: closed - Opened by qkqk-hub 10 months ago - 4 comments

#344 - How can I speed it up ?

Issue - State: open - Opened by qkqk-hub 10 months ago

#343 - Default parameter values on web interface?

Issue - State: open - Opened by suz11001 10 months ago - 4 comments

#341 - error run InterProScan5.63-95 with Singularity Container

Issue - State: closed - Opened by Liyong-Zhang 11 months ago - 2 comments

#341 - error run InterProScan5.63-95 with Singularity Container

Issue - State: closed - Opened by Liyong-Zhang 11 months ago - 2 comments

#341 - error run InterProScan5.63-95 with Singularity Container

Issue - State: closed - Opened by Liyong-Zhang 11 months ago - 2 comments

#339 - installation issue

Issue - State: open - Opened by schmidoletti 12 months ago - 1 comment

#339 - installation issue

Issue - State: open - Opened by schmidoletti 12 months ago - 1 comment

#339 - installation issue

Issue - State: open - Opened by schmidoletti 12 months ago - 1 comment

#339 - installation issue

Issue - State: open - Opened by schmidoletti 12 months ago - 1 comment

#338 - Error running InterProScan (Unable to access jarfile interproscan-5.jar)

Issue - State: closed - Opened by D-Git-Bit 12 months ago - 1 comment

#338 - Error running InterProScan (Unable to access jarfile interproscan-5.jar)

Issue - State: closed - Opened by D-Git-Bit 12 months ago - 1 comment

#338 - Error running InterProScan (Unable to access jarfile interproscan-5.jar)

Issue - State: closed - Opened by D-Git-Bit 12 months ago - 1 comment

#338 - Error running InterProScan (Unable to access jarfile interproscan-5.jar)

Issue - State: closed - Opened by D-Git-Bit 12 months ago - 1 comment

#337 - Custom database path

Issue - State: closed - Opened by mesti90 12 months ago - 1 comment

#337 - Custom database path

Issue - State: closed - Opened by mesti90 12 months ago - 1 comment

#337 - Custom database path

Issue - State: closed - Opened by mesti90 12 months ago - 1 comment

#336 - Error in mobidb: invalid next size

Issue - State: closed - Opened by xingjianfeng100 12 months ago - 2 comments

#335 - Pfam-N in InterProScan command line?

Issue - State: closed - Opened by photocyte 12 months ago - 1 comment

#335 - Pfam-N in InterProScan command line?

Issue - State: closed - Opened by photocyte 12 months ago - 1 comment

#335 - Pfam-N in InterProScan command line?

Issue - State: closed - Opened by photocyte 12 months ago - 1 comment

#335 - Pfam-N in InterProScan command line?

Issue - State: closed - Opened by photocyte 12 months ago - 1 comment

#335 - Pfam-N in InterProScan command line?

Issue - State: closed - Opened by photocyte 12 months ago - 1 comment

#334 - Interproscan XML produces go-xref without a category

Issue - State: closed - Opened by aldendirks about 1 year ago - 1 comment

#333 - interproscan not recognizing fasta format

Issue - State: closed - Opened by amsamani about 1 year ago - 1 comment

#333 - interproscan not recognizing fasta format

Issue - State: closed - Opened by amsamani about 1 year ago - 1 comment

#333 - interproscan not recognizing fasta format

Issue - State: closed - Opened by amsamani about 1 year ago - 1 comment

#333 - interproscan not recognizing fasta format

Issue - State: closed - Opened by amsamani about 1 year ago - 1 comment

#332 - test completes successfully but real data crashes . . .

Issue - State: closed - Opened by benyoung93 about 1 year ago - 2 comments

#332 - test completes successfully but real data crashes . . .

Issue - State: closed - Opened by benyoung93 about 1 year ago - 2 comments

#332 - test completes successfully but real data crashes . . .

Issue - State: closed - Opened by benyoung93 about 1 year ago - 2 comments

#330 - Docker image

Issue - State: closed - Opened by multimeric about 1 year ago - 2 comments

#330 - Docker image

Issue - State: closed - Opened by multimeric about 1 year ago - 2 comments

#329 - Alternative FPT sites?

Issue - State: closed - Opened by spitfiredd over 1 year ago - 2 comments

#329 - Alternative FPT sites?

Issue - State: closed - Opened by spitfiredd over 1 year ago - 2 comments

#329 - Alternative FPT sites?

Issue - State: closed - Opened by spitfiredd over 1 year ago - 2 comments

#328 - Bump guava from 29.0-jre to 32.0.0-jre in /core

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#328 - Bump guava from 29.0-jre to 32.0.0-jre in /core

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#328 - Bump guava from 29.0-jre to 32.0.0-jre in /core

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#327 - update ncbifam to 12.0

Pull Request - State: closed - Opened by laisecf over 1 year ago

#327 - update ncbifam to 12.0

Pull Request - State: closed - Opened by laisecf over 1 year ago

#327 - update ncbifam to 12.0

Pull Request - State: closed - Opened by laisecf over 1 year ago

#327 - update ncbifam to 12.0

Pull Request - State: closed - Opened by laisecf over 1 year ago

#326 - Incorrect downloads under 'Releases'?

Issue - State: closed - Opened by Ghepardo over 1 year ago - 1 comment

#326 - Incorrect downloads under 'Releases'?

Issue - State: closed - Opened by Ghepardo over 1 year ago - 1 comment

#326 - Incorrect downloads under 'Releases'?

Issue - State: closed - Opened by Ghepardo over 1 year ago - 1 comment

#326 - Incorrect downloads under 'Releases'?

Issue - State: closed - Opened by Ghepardo over 1 year ago - 1 comment

#326 - Incorrect downloads under 'Releases'?

Issue - State: closed - Opened by Ghepardo over 1 year ago - 1 comment

#325 - Interpro uses more CPUs than I specified:

Issue - State: closed - Opened by sbthandras over 1 year ago - 1 comment

#325 - Interpro uses more CPUs than I specified:

Issue - State: closed - Opened by sbthandras over 1 year ago - 1 comment

#324 - hmmscan step only used 1 cpu

Issue - State: closed - Opened by zhan4429 over 1 year ago - 2 comments

#323 - [1]+ Exit 231 ERROR - Command line failed with exit code: 1

Issue - State: closed - Opened by Neo-xbx-00 over 1 year ago - 4 comments

#322 - line 61: 668576 Killed

Issue - State: closed - Opened by dylan33smith over 1 year ago - 1 comment

#321 - Bump jetty-server from 11.0.10 to 11.0.14 in /core/precalcmatches/server

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#320 - Bump jetty-server from 11.0.10 to 11.0.14 in /core/web

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#319 - Bump spring-core from 5.2.22.RELEASE to 5.2.24.RELEASE in /core

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#318 - Large File Space Causing Issues Running InterProScan

Issue - State: closed - Opened by rghosh670 over 1 year ago - 1 comment

#317 - different results between InterPro and InterProScan

Issue - State: closed - Opened by sjfleck over 1 year ago - 2 comments

#316 - Bump spring-core from 5.2.22.RELEASE to 5.2.23.RELEASE in /core

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#315 - SyntaxError: invalid imaginary literal

Issue - State: closed - Opened by sjfleck over 1 year ago - 1 comment

#315 - SyntaxError: invalid imaginary literal

Issue - State: closed - Opened by sjfleck over 1 year ago - 1 comment

#314 - Error exit codes:1 and 25

Issue - State: closed - Opened by GiuseppePin over 1 year ago - 3 comments

#313 - Error when trying to use interproscan on cluster

Issue - State: open - Opened by Cyaneis over 1 year ago

#313 - Error when trying to use interproscan on cluster

Issue - State: open - Opened by Cyaneis over 1 year ago

#310 - WARN - Ignoring line with unexpected format

Issue - State: open - Opened by marketavlkova over 1 year ago - 5 comments

#310 - WARN - Ignoring line with unexpected format

Issue - State: open - Opened by marketavlkova over 1 year ago - 5 comments

#309 - Change in GO term reported in XML files

Issue - State: closed - Opened by hyphaltip over 1 year ago - 1 comment

#309 - Change in GO term reported in XML files

Issue - State: open - Opened by hyphaltip over 1 year ago - 1 comment

#308 - Self-suppression not permitted

Issue - State: open - Opened by theo-allnutt-bioinformatics over 1 year ago - 3 comments

#308 - Self-suppression not permitted

Issue - State: open - Opened by theo-allnutt-bioinformatics over 1 year ago - 3 comments