earth-chris/elapid issues and pull requests

#100 - Boyce index code

Pull Request - State: open - Opened by PC-FSU about 1 month ago - 1 comment

#99 - Add pyproject.toml

Pull Request - State: closed - Opened by earth-chris 3 months ago
Labels: enhancement

#98 - module 'elapid' has no attribute

Issue - State: closed - Opened by bobilong about 1 year ago

#97 - Add a function to retrieve GBIF species and convert formats.

Pull Request - State: open - Opened by osgeokr about 1 year ago

#96 - JOSS release

Pull Request - State: closed - Opened by earth-chris over 1 year ago
Labels: documentation

#95 - Add model inspection tools

Pull Request - State: closed - Opened by earth-chris over 1 year ago
Labels: documentation, science

#94 - user install instructions update

Pull Request - State: closed - Opened by earth-chris over 1 year ago
Labels: documentation

#93 - Support partial dependence plots and feature importance scores

Issue - State: closed - Opened by earth-chris over 1 year ago
Labels: documentation, enhancement

#92 - package install challenges from `conda-forge`

Issue - State: closed - Opened by earth-chris over 1 year ago - 6 comments
Labels: bug

#91 - fix matching crs error in `stack_geometries()`

Pull Request - State: closed - Opened by earth-chris over 1 year ago
Labels: bug

#90 - [JOSS review] Cannot determine CRS in Maxent vignette

Issue - State: closed - Opened by gabrieldansereau over 1 year ago - 3 comments
Labels: bug

#89 - add CITATTION.cff

Pull Request - State: closed - Opened by earth-chris over 1 year ago
Labels: documentation

#88 - Citing elapid library

Issue - State: closed - Opened by aFewThings over 1 year ago - 3 comments
Labels: documentation

#87 - calculate distance weights from all neighbors

Pull Request - State: closed - Opened by earth-chris over 1 year ago
Labels: enhancement

#86 - add notebook docs

Pull Request - State: closed - Opened by earth-chris almost 2 years ago - 1 comment
Labels: documentation, enhancement

#85 - add ariolimax dataset

Pull Request - State: closed - Opened by earth-chris almost 2 years ago
Labels: enhancement, high priority

#84 - added `quiet` keyword to suppress tqdm output

Pull Request - State: closed - Opened by earth-chris almost 2 years ago
Labels: enhancement

#83 - Add mathjax

Pull Request - State: closed - Opened by earth-chris almost 2 years ago
Labels: documentation

#82 - added `data_files` to setup.py

Pull Request - State: closed - Opened by earth-chris almost 2 years ago
Labels: bug

#81 - handle dropped NA values when annotating a `GeoDataFrame`

Issue - State: closed - Opened by earth-chris almost 2 years ago
Labels: bug

#80 - add `quiet` option to silence tqdm

Issue - State: closed - Opened by earth-chris almost 2 years ago
Labels: enhancement, low priority

#79 - `nan` / `-inf` from computing hinge features across uniform covariate values

Issue - State: open - Opened by earth-chris almost 2 years ago
Labels: bug

#78 - [JOSS review]: fixing minor typos

Pull Request - State: closed - Opened by gabrieldansereau almost 2 years ago

#77 - [JOSS review]: data to reproduce the examples in the documentation

Issue - State: closed - Opened by gabrieldansereau almost 2 years ago - 3 comments
Labels: documentation, high priority

#76 - [JOSS review]: unexpected keyword argument in envelope suitability

Issue - State: closed - Opened by gabrieldansereau almost 2 years ago - 1 comment
Labels: bug, documentation

#75 - [JOSS review]: unexpected keyword argument with feature transformations

Issue - State: closed - Opened by gabrieldansereau almost 2 years ago - 1 comment
Labels: bug, documentation

#74 - [JOSS review]: Sample data missing at installation

Issue - State: closed - Opened by gabrieldansereau almost 2 years ago - 1 comment
Labels: bug

#73 - Simplify `glmnet` dependency

Pull Request - State: closed - Opened by earth-chris almost 2 years ago
Labels: documentation

#72 - fix inconsistent model save/load behavior

Pull Request - State: closed - Opened by earth-chris almost 2 years ago - 1 comment
Labels: bug

#71 - fix hinge and threshold feature transformer attributes

Pull Request - State: closed - Opened by earth-chris almost 2 years ago
Labels: bug

#70 - add BufferedLeaveOneOut cross-val

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: enhancement, science

#69 - fix `sample_raster` nodata for certain rasters

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: bug

#68 - assign sample raster nodata

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: enhancement

#67 - add progress bar to point annotation

Pull Request - State: closed - Opened by earth-chris about 2 years ago - 1 comment
Labels: enhancement

#66 - update install instructions

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: documentation

#65 - implement `sklearn` best practices

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: enhancement, low priority

#64 - JOSS submission

Pull Request - State: closed - Opened by earth-chris about 2 years ago - 1 comment
Labels: documentation

#63 - add checkerboard split, geographic k-fold

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: enhancement

#62 - adding package build before publish action

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: bug

#61 - use workflow package publishing

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: enhancement

#60 - add `stack_geometries` method

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: documentation, enhancement

#59 - Multi neighbor distances

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: enhancement

#58 - drop nodata using intersection instead of union

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: bug

#57 - add `sample_weight` support

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: documentation, enhancement

#56 - JOSS prep

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: documentation

#55 - Compute spatial weights

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: enhancement

#54 - update to personal docstyle

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: documentation

#53 - Package dependency refactor

Pull Request - State: closed - Opened by earth-chris about 2 years ago - 1 comment
Labels: enhancement

#52 - Add sklearn logistic regression

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: enhancement

#51 - validate `maxnet` consistency

Pull Request - State: closed - Opened by earth-chris about 2 years ago
Labels: documentation

#50 - Clear maxent model state in `initialize_model()`

Pull Request - State: closed - Opened by earth-chris about 2 years ago

#49 - Add format_occurrence_data method

Pull Request - State: closed - Opened by earth-chris about 2 years ago

#48 - Handle 2d `y` variables

Issue - State: closed - Opened by earth-chris about 2 years ago
Labels: bug

#47 - `model.fit()` should clear state prior to running

Issue - State: closed - Opened by earth-chris about 2 years ago
Labels: bug

#46 - ham it up

Pull Request - State: closed - Opened by earth-chris over 2 years ago
Labels: documentation

#45 - bugfix `geoseries.to_crs()` inplace call

Pull Request - State: closed - Opened by earth-chris over 2 years ago
Labels: bug

#44 - docs refactor

Pull Request - State: closed - Opened by earth-chris over 2 years ago
Labels: documentation

#43 - Niche envelope model

Pull Request - State: closed - Opened by earth-chris over 2 years ago
Labels: enhancement

#42 - zonal stats

Pull Request - State: closed - Opened by earth-chris over 2 years ago
Labels: enhancement

#41 - generalize apply_model_to_raster

Pull Request - State: closed - Opened by earth-chris over 2 years ago
Labels: enhancement

#40 - Annotation refactor

Pull Request - State: closed - Opened by earth-chris over 2 years ago
Labels: enhancement

#39 - Features refactor

Pull Request - State: closed - Opened by earth-chris over 2 years ago
Labels: enhancement

#38 - minor geo module refactor

Pull Request - State: closed - Opened by earth-chris over 2 years ago
Labels: bug, enhancement

#37 - Windows test

Pull Request - State: closed - Opened by earth-chris almost 3 years ago - 2 comments

#36 - multi-os testing

Pull Request - State: closed - Opened by earth-chris almost 3 years ago - 1 comment

#35 - add tau scaling

Pull Request - State: closed - Opened by earth-chris almost 3 years ago - 1 comment

#34 - setting column dtype from raster profile

Pull Request - State: closed - Opened by earth-chris almost 3 years ago
Labels: bug

#33 - Feature/workflow dependencies

Pull Request - State: closed - Opened by earth-chris almost 3 years ago - 1 comment
Labels: enhancement

#32 - Set up CI workflow dependencies

Issue - State: closed - Opened by earth-chris almost 3 years ago

#31 - Pytest

Pull Request - State: closed - Opened by earth-chris almost 3 years ago - 1 comment
Labels: enhancement

#30 - Testing CI on all PRs

Issue - State: closed - Opened by earth-chris almost 3 years ago

#29 - Requirements cleanup

Pull Request - State: closed - Opened by earth-chris almost 3 years ago

#28 - Create conda skeleton to deploy package via GH Actions

Issue - State: closed - Opened by earth-chris almost 3 years ago - 2 comments

#27 - Remove docs/pre-commit dependencies from environment.yml

Issue - State: closed - Opened by earth-chris almost 3 years ago

#26 - Remove old docker references, superfluous conda routines from Makefile

Issue - State: closed - Opened by earth-chris almost 3 years ago

#25 - pseudoabsence_from_bias_file not properly accounting for bias

Issue - State: closed - Opened by earth-chris about 3 years ago - 1 comment
Labels: bug

#24 - `progress_apply` breaks in recent pandas packages

Issue - State: closed - Opened by earth-chris about 3 years ago - 1 comment
Labels: bug

#23 - geodataframe data types often set to `object` instead of a typical python/numpy data type

Issue - State: closed - Opened by earth-chris about 3 years ago - 1 comment
Labels: bug

#22 - Annotation progress

Pull Request - State: closed - Opened by earth-chris over 3 years ago

#21 - Test development

Pull Request - State: closed - Opened by earth-chris over 3 years ago - 1 comment

#20 - Report progress for raster annotation

Issue - State: closed - Opened by earth-chris over 3 years ago - 1 comment
Labels: enhancement, low priority

#19 - Container-CI

Pull Request - State: closed - Opened by earth-chris over 3 years ago

#18 - Create a niche envelope model class

Issue - State: closed - Opened by earth-chris over 3 years ago
Labels: enhancement, low priority

#17 - CI for mkdocstrings is broken

Issue - State: closed - Opened by earth-chris over 3 years ago
Labels: bug, documentation, high priority

#16 - Docstring updates

Pull Request - State: closed - Opened by earth-chris over 3 years ago

#15 - Update to google-style docstrings

Issue - State: closed - Opened by earth-chris over 3 years ago - 1 comment
Labels: documentation, enhancement

#14 - Update feature extraction functions to use 'annotation' terminology

Issue - State: closed - Opened by earth-chris over 3 years ago
Labels: enhancement, low priority

#13 - docs using forest observatory identity elements

Pull Request - State: closed - Opened by earth-chris over 3 years ago
Labels: documentation

#12 - Dedicated documentation system setup

Pull Request - State: closed - Opened by earth-chris over 3 years ago

#11 - Develop dedicated documentation system

Issue - State: closed - Opened by earth-chris over 3 years ago
Labels: documentation, enhancement

#10 - There's no testing suite

Issue - State: closed - Opened by earth-chris over 3 years ago - 1 comment
Labels: enhancement, high priority

#9 - error: library glmnet has Fortran sources but no Fortran compiler found

Issue - State: closed - Opened by jeffreysmith-jrs over 3 years ago - 7 comments
Labels: bug, documentation

#8 - Feature/skip nodata reads

Pull Request - State: closed - Opened by earth-chris over 3 years ago

#7 - Feature/simple windowed read

Pull Request - State: closed - Opened by earth-chris over 3 years ago

#6 - Simplify apply_model_to_raster windowed read logic

Issue - State: closed - Opened by earth-chris over 3 years ago
Labels: enhancement

#5 - speed up apply_model_to_raster via smarter no-data handling

Issue - State: closed - Opened by earth-chris over 3 years ago
Labels: enhancement, high priority

#4 - Convert transform keyword to **kwargs to support other sklearn model applications

Issue - State: closed - Opened by earth-chris over 3 years ago
Labels: enhancement, low priority

#3 - GDAL_DATA path missing if gdal conda package isn't installed

Issue - State: closed - Opened by earth-chris over 3 years ago - 2 comments
Labels: bug, low priority

#2 - add background reading section to README

Issue - State: closed - Opened by earth-chris over 3 years ago
Labels: documentation, help wanted, low priority

#1 - add tau scaling

Issue - State: closed - Opened by earth-chris over 3 years ago
Labels: enhancement, science

GitHub / earth-chris/elapid issues and pull requests