Ecosyste.ms: Issues
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GitHub / dr-joe-wirth/phantasm issues and pull requests
#18 - Phantasm Installation which works for me
Issue -
State: closed - Opened by bharat1912 about 1 year ago
- 1 comment
#17 - add a `check` job to evaluate if phantasm and dependencies are properly installed
Issue -
State: closed - Opened by dr-joe-wirth about 1 year ago
#16 - Failed SSL hello
Issue -
State: closed - Opened by astrodea about 1 year ago
- 2 comments
#15 - human_map.txt file and outgroup
Issue -
State: closed - Opened by bharat1912 about 1 year ago
- 9 comments
#14 - getPhyloMarker error
Issue -
State: closed - Opened by bharat1912 about 1 year ago
- 2 comments
#13 - run `rankPhyloMarkers` without running `analyzeGenomes` or `knownPhyloMarker` first
Issue -
State: open - Opened by dr-joe-wirth about 1 year ago
#12 - NCBI timeout when using multiple markers
Issue -
State: closed - Opened by astrodea about 1 year ago
- 8 comments
#11 - Error for create makeSpeciesTreeWorkDir
Issue -
State: open - Opened by luisruis over 1 year ago
- 8 comments
#10 - Error in Option 2: unknown reference genomes and known phylogenetic marker
Issue -
State: closed - Opened by luisruis over 1 year ago
- 6 comments
#9 - make a conda installation
Issue -
State: closed - Opened by dr-joe-wirth over 1 year ago
- 1 comment
#8 - Stuck in the step of "Finding missing relationships and updating the Taxonomy object"
Issue -
State: closed - Opened by yisuo1994 over 1 year ago
- 7 comments
#7 - AttributeError(ERR 1) Taxonomy objects in the list must be at their root
Issue -
State: closed - Opened by thisisliuqing over 1 year ago
- 8 comments
#6 - naming an input genome as an accession number can cause failure in getPhyloMarkers and refinePhylogeny
Issue -
State: closed - Opened by dr-joe-wirth over 1 year ago
#5 - add log file
Issue -
State: closed - Opened by dr-joe-wirth over 1 year ago
#4 - add Singularity support
Issue -
State: closed - Opened by dr-joe-wirth over 1 year ago
#3 - create workflow for identifying phylogenetic markers in user-specified genomes
Issue -
State: closed - Opened by dr-joe-wirth over 1 year ago
#2 - convert some parameters to flags
Issue -
State: closed - Opened by dr-joe-wirth over 1 year ago
#1 - Code Quality, Python Suggestions
Issue -
State: open - Opened by rkrishnasanka almost 2 years ago