Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / dozmorovlab/multiHiCcompare issues and pull requests

#23 - Reference level for group difference detection

Issue - State: open - Opened by JamesSpurrier 5 months ago

#22 - Empty hicexp

Issue - State: open - Opened by alkurowska 7 months ago - 1 comment

#21 - normalization between matrices

Issue - State: closed - Opened by Nico-FR 8 months ago - 1 comment

#20 - formatting hicexp_MD plots

Issue - State: open - Opened by AGunnell77 10 months ago - 2 comments

#19 - non-standard chromosome names

Issue - State: open - Opened by pna059 about 1 year ago - 1 comment
Labels: help wanted

#17 - How to remove mm9 blacklist regions when running multiHiCcompare?

Issue - State: closed - Opened by CW20221031 over 1 year ago - 1 comment

#16 - Version Incompatibility?

Issue - State: closed - Opened by jlguidubaldi1 over 1 year ago - 2 comments

#15 - Normalization of a single chromosme vs whole genome

Issue - State: closed - Opened by ashishjain1988 over 1 year ago - 2 comments

#14 - How can we illustrate trans-differential interaction with multiHiCcompare?

Issue - State: open - Opened by Z-H-Zhang about 2 years ago - 3 comments
Labels: help wanted

#13 - Progressive pooling

Issue - State: closed - Opened by BenxiaHu over 2 years ago - 2 comments

#12 - Updating straw version

Issue - State: open - Opened by sa501428 over 2 years ago - 1 comment
Labels: help wanted

#11 - error when running make_hicexp 'long vectors not supported yet'

Issue - State: closed - Opened by hrstu over 3 years ago - 8 comments

#10 - Custom cytoBand GenomicRanges (for mouse genome)

Issue - State: closed - Opened by biofilos over 3 years ago - 7 comments
Labels: help wanted

#9 - hic_exactTest error

Issue - State: closed - Opened by BenxiaHu about 4 years ago - 6 comments

#8 - topDirs function isn't compatible with hic_glm when multiple contrasts are passed through

Issue - State: open - Opened by serine about 4 years ago - 1 comment
Labels: help wanted

#7 - Can Not make_hicexp From HiC-Pro Data

Issue - State: closed - Opened by jeffreygwang over 4 years ago - 4 comments

#6 - calling specific chromosomes

Issue - State: closed - Opened by feefee20 over 4 years ago - 1 comment

#5 - hic_glm on resolutions > 1Mb

Issue - State: closed - Opened by hreypar over 4 years ago - 2 comments

#4 - Update fastlo.R

Pull Request - State: closed - Opened by menggf over 4 years ago - 1 comment

#3 - One versus many

Issue - State: closed - Opened by imerelli almost 5 years ago - 2 comments

#2 - debugging for sparse data

Pull Request - State: closed - Opened by armenabnousi about 5 years ago

#1 - error when running hic_exactTest with sparse data

Issue - State: closed - Opened by armenabnousi about 5 years ago - 2 comments