Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / donaldlab/OSPREY3 issues and pull requests
#100 - Designs with Cystines crash
Issue -
State: closed - Opened by gusennan about 5 years ago
Labels: bug
#99 - Osprey crashes when calculating GMEC of butane
Issue -
State: closed - Opened by gusennan over 5 years ago
- 2 comments
Labels: bug
#98 - generating a custom template library
Issue -
State: closed - Opened by castephens over 5 years ago
- 4 comments
#97 - Ligand strand definition
Issue -
State: closed - Opened by castephens over 5 years ago
#96 - GLIBC Importerror
Issue -
State: closed - Opened by castephens over 5 years ago
- 2 comments
#95 - `osprey.start()` loops infinitely when JAVA_HOME is set incorrectly
Issue -
State: closed - Opened by gusennan over 5 years ago
Labels: bug
#94 - Clean up issues found by Jeff!
Pull Request -
State: closed - Opened by eternityslyre almost 6 years ago
#93 - NullPointer using MARK*
Issue -
State: closed - Opened by alowegard almost 6 years ago
#92 - Mark star optimization+master merge
Pull Request -
State: closed - Opened by eternityslyre almost 6 years ago
#91 - update gradle version to 4.10.1
Pull Request -
State: closed - Opened by gusennan about 6 years ago
#90 - import Osprey Error
Issue -
State: closed - Opened by sinuxs about 6 years ago
- 4 comments
#89 - K* example script
Issue -
State: closed - Opened by gusennan about 6 years ago
- 3 comments
#88 - pip2 removes --use-wheel option in 10.1
Issue -
State: closed - Opened by gusennan about 6 years ago
- 3 comments
#87 - fix bug when forgetting root node of SMA* tree
Pull Request -
State: closed - Opened by alowegard about 6 years ago
#86 - EWAK* fixed
Pull Request -
State: closed - Opened by alowegard over 6 years ago
#85 - EWAK* fixed and ready
Pull Request -
State: closed - Opened by alowegard over 6 years ago
#84 - PMat
Pull Request -
State: closed - Opened by alowegard over 6 years ago
#83 - Merge pull request #82 from donaldlab/master
Pull Request -
State: closed - Opened by alowegard over 6 years ago
#82 - Get latest commits
Pull Request -
State: closed - Opened by alowegard over 6 years ago
#81 - Small updates
Pull Request -
State: closed - Opened by alowegard over 6 years ago
#80 - Anna - adding EWAKStar to the master branch
Pull Request -
State: closed - Opened by alowegard over 6 years ago
#79 - Anna - adding EWAKStar
Pull Request -
State: closed - Opened by alowegard over 6 years ago
#78 - Where did you get the ICC8's secondary structure PDB file from?
Issue -
State: closed - Opened by gusennan over 6 years ago
- 2 comments
#77 - fix typos
Pull Request -
State: closed - Opened by gusennan over 6 years ago
- 1 comment
#76 - Update repository location in contributing.rst
Pull Request -
State: closed - Opened by gusennan over 6 years ago
- 1 comment
#75 - MaxNumConfs and StrandRotTrans
Pull Request -
State: closed - Opened by wangsy11 over 6 years ago
- 3 comments
#74 - Installation script error
Issue -
State: closed - Opened by jkleinj over 6 years ago
- 2 comments
Labels: bug
#73 - Python
Pull Request -
State: closed - Opened by alowegard over 6 years ago
#72 - check mutfile early
Pull Request -
State: closed - Opened by lancelot-droid almost 7 years ago
#71 - individual mutations for ewak
Pull Request -
State: closed - Opened by lancelot-droid almost 7 years ago
#70 - Merge remote-tracking branch 'donaldlab/master'
Pull Request -
State: closed - Opened by alowegard almost 7 years ago
#69 - EWAK* Output
Pull Request -
State: closed - Opened by alowegard almost 7 years ago
#68 - EWAK* Updates
Pull Request -
State: closed - Opened by alowegard almost 7 years ago
#67 - Out of Error Memory on gpu-compute7
Issue -
State: closed - Opened by eternityslyre almost 7 years ago
- 2 comments
#66 - Master
Pull Request -
State: closed - Opened by lancelot-droid almost 7 years ago
#65 - Master
Pull Request -
State: closed - Opened by lancelot-droid almost 7 years ago
#64 - Master
Pull Request -
State: closed - Opened by lancelot-droid almost 7 years ago
#63 - Master
Pull Request -
State: closed - Opened by lancelot-droid almost 7 years ago
#62 - Master
Pull Request -
State: closed - Opened by lancelot-droid almost 7 years ago
#61 - Master
Pull Request -
State: closed - Opened by lancelot-droid almost 7 years ago
#60 - Master
Pull Request -
State: closed - Opened by lancelot-droid almost 7 years ago
#59 - Master
Pull Request -
State: closed - Opened by lancelot-droid almost 7 years ago
#58 - Master
Pull Request -
State: closed - Opened by lancelot-droid almost 7 years ago
#57 - Master
Pull Request -
State: closed - Opened by lancelot-droid about 7 years ago
#56 - Master
Pull Request -
State: closed - Opened by lancelot-droid about 7 years ago
#55 - bugfixes for gmec ratio
Pull Request -
State: closed - Opened by lancelot-droid about 7 years ago
#54 - updated ewakstar package name
Pull Request -
State: closed - Opened by lancelot-droid about 7 years ago
#53 - added files that i forgot to commit.
Pull Request -
State: closed - Opened by lancelot-droid about 7 years ago
#52 - several small fixes, see notes below
Pull Request -
State: closed - Opened by lancelot-droid about 7 years ago
#51 - initial EWAKStar code
Pull Request -
State: closed - Opened by lancelot-droid about 7 years ago
#50 - moved to log space for k* scores
Pull Request -
State: closed - Opened by lancelot-droid about 7 years ago
#49 - new argument for PDBFileReader
Pull Request -
State: closed - Opened by lancelot-droid about 7 years ago
#48 - Jpype problems
Issue -
State: closed - Opened by markhallen369 about 7 years ago
#47 - osprey.printGpuInfo() Cuda error
Issue -
State: closed - Opened by hnisonoff about 7 years ago
- 4 comments
#46 - emat.dat file
Issue -
State: closed - Opened by ever4cyth over 7 years ago
- 1 comment
#45 - structure generation
Issue -
State: closed - Opened by ever4cyth over 7 years ago
#44 - updates to residue ordering
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#43 - bug fixes for msk*
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#42 - small bug fixes for k*; new code for msk*
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#41 - define the protein strand
Issue -
State: closed - Opened by ever4cyth over 7 years ago
#40 - more msk* updates
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#39 - printGpuInfo() error
Issue -
State: closed - Opened by ever4cyth over 7 years ago
#38 - ms k* updates
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#37 - Perturbations fail at residue termini with addWTRots on
Issue -
State: closed - Opened by davidiot over 7 years ago
#36 - no classpath.txt
Issue -
State: closed - Opened by ever4cyth over 7 years ago
#35 - sequential residue ordering
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#34 - MSK* stuff; Rudimentary GPU load balancing
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#33 - MSK* stuff; Rudimentary GPU load balancing
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#32 - Tweaks to K* phase2; merge with master
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#31 - more refactoring
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#30 - more msK* refactoring
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#29 - msk* discrete partition function
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#28 - minor updates for msk*
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#27 - optionally suppress warnings when using non-AAs
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#26 - Questions about epsilon value calculation and conformaiton numbers in output file
Issue -
State: closed - Opened by wangsy11 over 7 years ago
- 2 comments
Labels: bug
#25 - Exhaustive MSK* works with DeePER, can write output pdbs
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#24 - works with deeper
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#23 - Synchronization bug with ParallelConfPartitionFunction.compute(int) function
Issue -
State: closed - Opened by lancelot-droid over 7 years ago
- 1 comment
#22 - Bug in PartialStructureSwitch copy constructor when running DeePER
Issue -
State: closed - Opened by lancelot-droid over 7 years ago
- 1 comment
#21 - un-broke parallelconfpartitionfunction test cases
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#20 - bug fixes
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#19 - preliminary muktistate ks stuff
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#18 - K* bug fixes, K* refactoring, and removal of unused imports
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#17 - initial multistate-kstar code
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#16 - Writting down top conformations
Issue -
State: closed - Opened by wangsy11 over 7 years ago
- 1 comment
#15 - fix test to check whether deeper is running
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#14 - merge inverted pruning matrix corner case
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#13 - less pruning for single sequence
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#12 - single seq. typedep pruning eliminates more rotamers
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#11 - fixed recently introduced counting error
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#10 - tiny bug and naming fixes
Pull Request -
State: closed - Opened by lancelot-droid over 7 years ago
#9 - no compile target
Issue -
State: closed - Opened by ever4cyth about 8 years ago
#8 - i forgot to commit 2 files. sorry.
Pull Request -
State: closed - Opened by lancelot-droid about 8 years ago
#7 - did some output cleanup for k* and bypass the ramacheck for deeper
Pull Request -
State: closed - Opened by lancelot-droid about 8 years ago
- 1 comment
#6 - build script
Issue -
State: closed - Opened by ever4cyth about 8 years ago
#5 - added k* code and test cases.
Pull Request -
State: closed - Opened by lancelot-droid about 8 years ago
#4 - Refactoring (and preliminary, orthogonal PDB alternate parsing changes)
Pull Request -
State: closed - Opened by eternityslyre almost 9 years ago
#3 - Delete 1CC8.emat.dat
Pull Request -
State: closed - Opened by lancelot-droid about 9 years ago
#2 - getting rid of test subdirectory
Pull Request -
State: closed - Opened by lancelot-droid about 9 years ago
- 1 comment
#1 - ok
Pull Request -
State: closed - Opened by lancelot-droid about 9 years ago