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GitHub / dmnfarrell/snipgenie issues and pull requests

#5 - subprocess.CalledProcessError: Command 'bcftools filter -i "QUAL>=40 && FORMAT/DP>=30 && DP4>=4" -o filtered.vcf.gz -O z calls.vcf' returned non-zero exit status 255.

Issue - State: closed - Opened by jolespin about 1 year ago - 12 comments

#4 - [Question] What is the internal logic in Snipgenie for flagging a SNP? (Comparison with manual analysis)

Issue - State: closed - Opened by jolespin about 1 year ago - 7 comments

#3 - [Feature Request] Use -1 and -2 arguments for reads

Issue - State: closed - Opened by jolespin over 1 year ago - 8 comments

#2 - Problem with pyvcf

Issue - State: closed - Opened by RichardUABC about 3 years ago - 2 comments

#1 - Make test set to compare pipelines

Issue - State: closed - Opened by dmnfarrell almost 5 years ago