Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / dmis-lab/bern issues and pull requests
#52 - Site is down
Issue -
State: open - Opened by gdilieto-unimib almost 2 years ago
#51 - can bern recognize cellLine entity?
Issue -
State: open - Opened by wenyuhaokikika about 2 years ago
#50 - FILE DOWNLOAD ISSUE
Issue -
State: open - Opened by combax over 2 years ago
#49 - tensorflow-gpu version
Issue -
State: open - Opened by wenyuhaokikika over 2 years ago
#48 - Website seems to be down
Issue -
State: closed - Opened by JaskaranKaurGill almost 3 years ago
- 2 comments
#47 - The Certificate of BERN website expired
Issue -
State: open - Opened by ghostintheshellarise about 3 years ago
- 8 comments
#46 - How to run and use from google colab ?
Issue -
State: open - Opened by AmeerAlkhier over 3 years ago
#45 - tmVar2sever running error
Issue -
State: open - Opened by xuehaoliu92 over 3 years ago
#44 - Server offline
Issue -
State: closed - Opened by shoaibb over 3 years ago
- 2 comments
#43 - [{'error': 'NER crash'}]
Issue -
State: open - Opened by NarenInD about 4 years ago
#42 - HTTPConnectionPool(host='164.52.196.65', port=8888): Max retries exceeded with url: / (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7fc1089f04a8>: Failed to establish a new connection: [Errno 111] Connection refused',))
Issue -
State: open - Opened by NarenInD about 4 years ago
#41 - Disease normalizer isn't being given entire input text, only the keyword
Issue -
State: open - Opened by mukund109 about 4 years ago
#40 - Don't have permission to push a new branch to make Pull Request
Issue -
State: open - Opened by avacaondata about 4 years ago
#39 - json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0)
Issue -
State: open - Opened by NarenInD about 4 years ago
- 1 comment
#38 - Containerization
Pull Request -
State: open - Opened by leonardomra about 4 years ago
#37 - ('Connection aborted.', RemoteDisconnected('Remote end closed connection without response',))
Issue -
State: open - Opened by NarenInD over 4 years ago
#36 - /bern/logs/nohup_gnormplus.out: No such file or directory
Issue -
State: closed - Opened by NarenInD over 4 years ago
#35 - {'status': 'fail', 'message': 'JSON PARSE ERROR'}
Issue -
State: open - Opened by NarenBabuR over 4 years ago
#34 - https://bern.korea.ac.kr/ not working
Issue -
State: closed - Opened by NarenBabuR over 4 years ago
- 2 comments
#33 - Not working with tensorflow 2.0
Issue -
State: open - Opened by avacaondata over 4 years ago
- 2 comments
#32 - JSONDecodeError for input of big size
Issue -
State: open - Opened by NarenInD over 4 years ago
- 1 comment
#31 - vibrio cholerae getting classified with all possibilties
Issue -
State: open - Opened by NarenInD over 4 years ago
#30 - Ending index is not correct in JSON for species category
Issue -
State: closed - Opened by NarenInD over 4 years ago
- 1 comment
#29 - Not getting classified
Issue -
State: open - Opened by NarenInD over 4 years ago
- 1 comment
#28 - Is database of BERN IDs to other ontologies mappings available?
Issue -
State: closed - Opened by saksham219 over 4 years ago
- 1 comment
#27 - Batch Processing for BERN server
Issue -
State: open - Opened by geekyogurt over 4 years ago
- 1 comment
#26 - How can I perform relation extraction?
Issue -
State: open - Opened by BharathRajaGajula over 4 years ago
#25 - lib/PAM140-6.txt (No such file or directory)
Issue -
State: closed - Opened by wanguan2000 over 4 years ago
- 1 comment
#24 - Need clarification on GNormPlus_180921.jar , tmVar2Server.jar and other normalizer jars
Issue -
State: open - Opened by rajeshkumargp over 4 years ago
#23 - Usage of crfpp-0.58.tar.gz is in GNormplus and Tmvar
Issue -
State: open - Opened by rajeshkumargp over 4 years ago
#22 - Could I use other port of Disease_normalizer_19.jar?
Issue -
State: open - Opened by shipse92 over 4 years ago
#21 - Incomplete abstracts + duplicated entries in 18.4 mil Pubmed dump
Issue -
State: open - Opened by mukund109 over 4 years ago
#20 - "setup.txt" file missing
Issue -
State: open - Opened by Sudeep09 over 4 years ago
- 2 comments
#19 - KeyError: 'disease'
Issue -
State: closed - Opened by jamshaidsohail5 over 4 years ago
- 4 comments
#18 - PubTator FileNotFound Error
Issue -
State: closed - Opened by jamshaidsohail5 over 4 years ago
- 1 comment
#17 - NER extraction of text seems not to be working
Issue -
State: open - Opened by amalic almost 5 years ago
- 9 comments
#16 - Problems running bern in Docker
Issue -
State: closed - Opened by amalic almost 5 years ago
- 2 comments
#15 - Running BERN on Windows: requests.exceptions.ConnectionError
Issue -
State: closed - Opened by ianovski almost 5 years ago
- 2 comments
#14 - There is a bug when bern recognize the 'Excerpt' section in some papers, shown below.
Issue -
State: open - Opened by SongbiaoZhu almost 5 years ago
- 3 comments
#13 - ModuleNotFoundError: No module named 'xmltodict' when running `tail -F logs/nohup_BERN.out`
Issue -
State: closed - Opened by enzoampil almost 5 years ago
- 2 comments
#12 - FileNotFoundError: [Errno 2] No such file or directory: 'biobert_ner/tmp/token_test_Thread-47.txt'
Issue -
State: closed - Opened by clouwer almost 5 years ago
- 1 comment
#11 - Switching off GNormPlus and tmVar; customizing BERN
Issue -
State: open - Opened by dimitrijenyc almost 5 years ago
- 1 comment
#10 - Using pre-trained models directly to predict on example text
Issue -
State: closed - Opened by Lahssiniabdel almost 5 years ago
- 1 comment
#9 - Only Abstracts are getting tagged
Issue -
State: closed - Opened by nakumgaurav almost 5 years ago
- 1 comment
#8 - BERN Server killed while predicting for an article
Issue -
State: closed - Opened by nakumgaurav almost 5 years ago
- 2 comments
#7 - elapsed_time for raw text
Pull Request -
State: closed - Opened by mjeensung about 5 years ago
#6 - Guide to fine-tune!
Issue -
State: closed - Opened by AndreasSaka about 5 years ago
- 1 comment
#5 - What does the start and end tag in entities represent?
Issue -
State: closed - Opened by shivanik96 about 5 years ago
- 5 comments
#4 - PubTator file not found error
Issue -
State: closed - Opened by dimitrijenyc about 5 years ago
- 7 comments
#3 - Kubernetes / Docker setup
Issue -
State: closed - Opened by vineethvijay-MyT about 5 years ago
- 1 comment
#2 - Predictions overlapping
Issue -
State: closed - Opened by cszer over 5 years ago
- 3 comments
#1 - POST request to local server
Issue -
State: closed - Opened by shiva1387 over 5 years ago
- 2 comments