djgroen/facs issues and pull requests

#55 - Visit probability more than 1

Issue - State: open - Opened by arindamsaha1507 10 months ago - 3 comments
Labels: bug

#55 - Visit probability more than 1

Issue - State: open - Opened by arindamsaha1507 10 months ago - 3 comments
Labels: bug

#54 - Improve household construction

Issue - State: open - Opened by djgroen 10 months ago
Labels: enhancement

#54 - Improve household construction

Issue - State: open - Opened by djgroen 10 months ago
Labels: enhancement

#53 - facs mpi4py install issue

Issue - State: open - Opened by shakir507 10 months ago - 7 comments
Labels: bug

#53 - facs mpi4py install issue

Issue - State: open - Opened by shakir507 10 months ago - 7 comments
Labels: bug

#52 - Preseeded Immunity

Pull Request - State: closed - Opened by arindamsaha1507 12 months ago

#52 - Preseeded Immunity

Pull Request - State: closed - Opened by arindamsaha1507 12 months ago

#51 - Testing: perriodic update

Pull Request - State: closed - Opened by arindamsaha1507 almost 1 year ago

#51 - Testing: perriodic update

Pull Request - State: closed - Opened by arindamsaha1507 almost 1 year ago

#50 - Testing added for utils module

Pull Request - State: closed - Opened by arindamsaha1507 about 1 year ago

#50 - Testing added for utils module

Pull Request - State: closed - Opened by arindamsaha1507 about 1 year ago

#49 - Add unit tests

Issue - State: open - Opened by arindamsaha1507 about 1 year ago
Labels: enhancement, future-proofing

#49 - Add unit tests

Issue - State: open - Opened by arindamsaha1507 about 1 year ago
Labels: enhancement, future-proofing

#48 - Modified nearest location algorithm

Pull Request - State: closed - Opened by arindamsaha1507 about 1 year ago - 3 comments
Labels: enhancement

#48 - Modified nearest location algorithm

Pull Request - State: closed - Opened by arindamsaha1507 about 1 year ago - 3 comments
Labels: enhancement

#47 - Introduce immune evasiveness

Issue - State: open - Opened by arindamsaha1507 about 1 year ago
Labels: enhancement

#47 - Introduce immune evasiveness

Issue - State: open - Opened by arindamsaha1507 about 1 year ago
Labels: enhancement

#46 - Reading antivax from config file

Pull Request - State: closed - Opened by arindamsaha1507 about 1 year ago

#46 - Reading antivax from config file

Pull Request - State: closed - Opened by arindamsaha1507 about 1 year ago

#45 - Read antivax from vaccinations.yml

Issue - State: closed - Opened by arindamsaha1507 about 1 year ago
Labels: measles

#45 - Read antivax from vaccinations.yml

Issue - State: closed - Opened by arindamsaha1507 about 1 year ago
Labels: measles

#44 - Start simulation with a fixed percentage of population immune

Issue - State: closed - Opened by arindamsaha1507 about 1 year ago
Labels: measles

#44 - Start simulation with a fixed percentage of population immune

Issue - State: closed - Opened by arindamsaha1507 about 1 year ago
Labels: measles

#43 - Integration of Measles into FACS

Issue - State: open - Opened by mzrghorbani about 1 year ago

#43 - Integration of Measles into FACS

Issue - State: open - Opened by mzrghorbani about 1 year ago

#42 - Cleanup Part 1

Pull Request - State: closed - Opened by arindamsaha1507 about 1 year ago

#42 - Cleanup Part 1

Pull Request - State: closed - Opened by arindamsaha1507 about 1 year ago

#41 - Hospitals randomly chosen?

Issue - State: open - Opened by arindamsaha1507 about 1 year ago
Labels: question

#41 - Hospitals randomly chosen?

Issue - State: open - Opened by arindamsaha1507 about 1 year ago
Labels: question

#40 - Bring FACS2 paper to submission to journal

Issue - State: open - Opened by djgroen about 1 year ago

#40 - Bring FACS2 paper to submission to journal

Issue - State: open - Opened by djgroen about 1 year ago

#39 - Write a draft of the FACS2 journal paper (all sections filled, conference quality)

Issue - State: open - Opened by djgroen about 1 year ago

#39 - Write a draft of the FACS2 journal paper (all sections filled, conference quality)

Issue - State: open - Opened by djgroen about 1 year ago

#38 - Thorough cleanup

Issue - State: open - Opened by arindamsaha1507 over 1 year ago
Labels: documentation, good first issue, future-proofing

#38 - Thorough cleanup

Issue - State: open - Opened by arindamsaha1507 over 1 year ago
Labels: documentation, good first issue, future-proofing

#37 - Refactoring

Pull Request - State: closed - Opened by arindamsaha1507 over 1 year ago

#37 - Refactoring

Pull Request - State: closed - Opened by arindamsaha1507 over 1 year ago

#36 - Add support for Measles modelling

Issue - State: open - Opened by djgroen over 1 year ago
Labels: enhancement, measles

#36 - Add support for Measles modelling

Issue - State: open - Opened by djgroen over 1 year ago
Labels: enhancement, measles

#35 - Add more simulations to the FACS autovalidator

Issue - State: open - Opened by djgroen over 1 year ago - 4 comments
Labels: enhancement, good first issue, future-proofing

#35 - Add more simulations to the FACS autovalidator

Issue - State: open - Opened by djgroen over 1 year ago - 4 comments
Labels: enhancement, good first issue, future-proofing

#34 - Refactor base source code for FACS

Issue - State: closed - Opened by djgroen over 1 year ago
Labels: enhancement, future-proofing

#33 - Full disease support for mutations

Issue - State: open - Opened by djgroen over 1 year ago
Labels: enhancement

#32 - Workspace updates

Issue - State: closed - Opened by djgroen over 2 years ago
Labels: enhancement

#32 - Workspace updates

Issue - State: closed - Opened by djgroen over 2 years ago
Labels: enhancement

#31 - Vaccine updates

Issue - State: closed - Opened by djgroen over 2 years ago - 4 comments
Labels: bug

#31 - Vaccine updates

Issue - State: closed - Opened by djgroen over 2 years ago - 4 comments
Labels: bug

#30 - Expose household size as a cmdline parameter

Issue - State: closed - Opened by djgroen over 2 years ago - 2 comments
Labels: enhancement

#29 - Changing the default names of the configuration files

Issue - State: closed - Opened by arindamsaha1507 over 2 years ago - 1 comment
Labels: enhancement

#28 - Support initial infection ratio entry

Issue - State: closed - Opened by djgroen over 2 years ago - 1 comment
Labels: enhancement

#28 - Support initial infection ratio entry

Issue - State: closed - Opened by djgroen over 2 years ago - 1 comment
Labels: enhancement

#27 - Area of locations do not seem to have an effect on the infections

Issue - State: closed - Opened by arindamsaha1507 over 2 years ago - 4 comments
Labels: bug

#26 - Runtime error introduced via one of the latest changes?

Issue - State: closed - Opened by arindamsaha1507 over 2 years ago - 12 comments
Labels: bug

#25 - Change the date format in measures files to yyyy-mm-dd

Issue - State: closed - Opened by arindamsaha1507 over 2 years ago - 3 comments
Labels: enhancement

#24 - Unable to plot location_plot while using FabSim

Issue - State: closed - Opened by arindamsaha1507 over 2 years ago - 5 comments
Labels: bug

#23 - covid_out files in output directory?

Issue - State: closed - Opened by arindamsaha1507 over 2 years ago - 1 comment

#22 - Add Age-based lockdown measures

Issue - State: open - Opened by djgroen over 2 years ago

#21 - Enable location-specific introduction of infections

Issue - State: open - Opened by djgroen over 2 years ago - 1 comment
Labels: enhancement

#20 - Preseed immunity and vaccination effects in the simulation

Issue - State: open - Opened by djgroen over 2 years ago - 3 comments
Labels: enhancement

#19 - Fully debug parallel facs and merge into master

Issue - State: closed - Opened by djgroen about 3 years ago - 1 comment
Labels: enhancement

#18 - Design a file-based approach to incorporate new strains / mutations explicitly

Issue - State: closed - Opened by djgroen about 3 years ago - 1 comment

#17 - Add support for care homes

Issue - State: open - Opened by djgroen about 3 years ago
Labels: enhancement

#16 - dump nearest locations and not exit

Issue - State: closed - Opened by djgroen about 3 years ago - 1 comment
Labels: enhancement

#15 - Pfacs

Pull Request - State: closed - Opened by djgroen about 3 years ago

#14 - Fix print flush issue

Pull Request - State: closed - Opened by djgroen over 3 years ago

#13 - Q1 2021 proposed tweaks

Issue - State: closed - Opened by djgroen almost 4 years ago - 1 comment

#12 - add verification check on vaccinate ()

Issue - State: open - Opened by djgroen almost 4 years ago
Labels: future-proofing

#11 - Incorporate new literature sources

Issue - State: closed - Opened by djgroen about 4 years ago

#10 - Brunel: group classmates in households (bubble approach)

Issue - State: closed - Opened by djgroen about 4 years ago - 1 comment
Labels: enhancement

#9 - Campus modelling feature list (iteration 1)

Issue - State: closed - Opened by djgroen about 4 years ago - 5 comments
Labels: enhancement

#8 - Modify nearest location algorithm

Issue - State: closed - Opened by djgroen over 4 years ago - 2 comments

#7 - COVID-19 and Blood Type

Issue - State: closed - Opened by imahmood786 over 4 years ago - 1 comment

#6 - August revision feature list

Issue - State: closed - Opened by djgroen over 4 years ago - 3 comments
Labels: enhancement

#5 - Output individual deaths and recoveries

Issue - State: closed - Opened by imahmood786 over 4 years ago - 1 comment

#4 - Revise household propagation for hospitalised people

Issue - State: closed - Opened by djgroen over 4 years ago - 1 comment
Labels: bug

#3 - Redesign hospital/clinic selection

Issue - State: closed - Opened by djgroen over 4 years ago - 3 comments

#2 - Mortality chance set to 0.0138 / 0.061 statically when hospitalised. Update to reflect latest findings?

Issue - State: closed - Opened by djgroen over 4 years ago
Labels: enhancement, descoped

#1 - Error loading larger file (Torbay_buildings.csv)

Issue - State: closed - Opened by drdjb over 4 years ago - 1 comment

GitHub / djgroen/facs issues and pull requests