dejunlin/hicrep issues and pull requests

#20 - AssertionError: Contact matrix 2 of chromosome Y is empty

Issue - State: closed - Opened by redjay8 about 1 year ago - 2 comments
Labels: corrupted input data

#19 - Compare similarity using ICE-normalized cool files

Issue - State: closed - Opened by zzhoujialu about 1 year ago - 1 comment
Labels: question

#18 - `AssertionError` when running hicrep

Issue - State: closed - Opened by PanZiwei about 2 years ago - 1 comment

#17 - AssertionError: Input cool files have different number of bins

Issue - State: closed - Opened by hiroyukikato911 almost 3 years ago - 2 comments
Labels: corrupted input data

#16 - Enhancement: add option to exclude chromosomes from SCC computation

Pull Request - State: closed - Opened by kevbrick almost 3 years ago - 4 comments

#15 - "chrM" not being excluded

Issue - State: closed - Opened by kevbrick almost 3 years ago - 3 comments
Labels: data standard

#14 - The chromosome order in output.SCC.txt

Issue - State: closed - Opened by KunFang93 over 3 years ago - 3 comments

#13 - Should the input matrix be normalized for hicrep?

Issue - State: closed - Opened by YiweiNiu over 3 years ago - 3 comments

#12 - KeyError: "Unable to open object (object 'chroms' doesn't exist)"

Issue - State: closed - Opened by YiweiNiu over 3 years ago - 2 comments

#11 - Slight README changes

Pull Request - State: closed - Opened by justin-a-sanders over 3 years ago

#10 - [Request] Functionality use hicrep with .hic files

Issue - State: closed - Opened by srcoulombe over 3 years ago - 1 comment

#9 - KeyError: 'sum'

Issue - State: closed - Opened by mdozmorov over 3 years ago - 7 comments
Labels: corrupted input data

#8 - Enhancement: Bugfix

Pull Request - State: closed - Opened by justin-a-sanders almost 4 years ago

#7 - Enhancement: Add testing for multiple dependency versions

Pull Request - State: closed - Opened by justin-a-sanders almost 4 years ago

#6 - Enhancement: bugfix and adding Travis version tests

Pull Request - State: closed - Opened by justin-a-sanders almost 4 years ago - 1 comment

#5 - About Interpretation of results

Issue - State: closed - Opened by qianXX almost 4 years ago - 2 comments

#4 - Existing python implementation

Issue - State: closed - Opened by cmdoret almost 4 years ago - 2 comments

#3 - Testing

Pull Request - State: closed - Opened by justin-a-sanders about 4 years ago - 1 comment

#2 - Testing

Pull Request - State: closed - Opened by justin-a-sanders about 4 years ago

#1 - Create index.rst