dbvis-ukon/movekit issues and pull requests

#216 - updated dependencies and example notebooks, updated group_movement

Pull Request - State: closed - Opened by TimKleinlein over 1 year ago

#215 - improved performance of gets_ord and added some unit tests

Pull Request - State: closed - Opened by TimKleinlein over 1 year ago

#214 - update explore_features and some functions due to warnings

Pull Request - State: closed - Opened by TimKleinlein over 1 year ago

#213 - module 'movekit' has no attribute 'getis_ord'

Issue - State: closed - Opened by MZeinab over 1 year ago - 3 comments

#212 - added examples in notebooks for getis_ord(), read_with_geometry() and plot_heatmap()

Pull Request - State: closed - Opened by TimKleinlein over 1 year ago

#211 - added read_with_geometry() and getis_ord() and plot_heatmap()

Pull Request - State: closed - Opened by TimKleinlein over 1 year ago

#210 - added read_with_geometry() and getis_ord()

Pull Request - State: closed - Opened by TimKleinlein over 1 year ago

#209 - Heatmaps for movebank

Issue - State: closed - Opened by eren-ck over 1 year ago

#208 - Calculate the density of time

Issue - State: closed - Opened by eren-ck over 1 year ago

#207 - Find hot spots in the movement dataset

Issue - State: closed - Opened by eren-ck over 1 year ago

#206 - Support GeoPandas

Issue - State: closed - Opened by eren-ck over 1 year ago

#205 - Update all dependencies

Issue - State: closed - Opened by eren-ck over 1 year ago

#204 - Remove multiprocessing_test

Issue - State: closed - Opened by eren-ck over 1 year ago

#203 - added functions segment_data and outlier_by_threshold, updated outlier_detection and movement_stopping_durations, added respective unit tests, added respective documentation, formatted documentation

Pull Request - State: closed - Opened by TimKleinlein almost 2 years ago

#202 - added segment_data and outlier_by_threshold, updated outlier_detection to more available detection algorithms, added unit tests

Pull Request - State: closed - Opened by TimKleinlein almost 2 years ago

#201 - Outlier detection

Issue - State: closed - Opened by eren-ck almost 2 years ago

#200 - Segment the data in subsets by feature values

Issue - State: closed - Opened by eren-ck almost 2 years ago

#199 - Identify & remove outliers

Issue - State: closed - Opened by eren-ck almost 2 years ago

#198 - Tests

Issue - State: closed - Opened by eren-ck almost 2 years ago

#197 - updated documentation, readme, example notebooks, package requirements, and function split_movement_trajectory

Pull Request - State: closed - Opened by TimKleinlein almost 2 years ago

#196 - updated documentation, readme, example notebooks, package requirements, and function split_movement_trajectory

Pull Request - State: closed - Opened by TimKleinlein almost 2 years ago

#195 - updated documentation, readme, example notebooks, package requirements, and function split_movement_trajectory

Pull Request - State: closed - Opened by TimKleinlein almost 2 years ago

#194 - Update to numpy 1.22

Issue - State: closed - Opened by eren-ck almost 2 years ago

#193 - Update readme

Issue - State: closed - Opened by eren-ck almost 2 years ago

#192 - Warning

Issue - State: closed - Opened by eren-ck almost 2 years ago

#191 - movement_stopping_durations

Issue - State: closed - Opened by eren-ck almost 2 years ago

#190 - updated package to work with all date time formats & extract features for different time granularities, updated unit tests and cleaned code base

Pull Request - State: closed - Opened by TimKleinlein almost 2 years ago

#189 - Clean code base

Issue - State: closed - Opened by eren-ck about 2 years ago

#188 - Update documentation

Issue - State: closed - Opened by eren-ck about 2 years ago

#187 - example on how to compute features, i.e. average speed, for different time granularities

Pull Request - State: closed - Opened by TimKleinlein about 2 years ago

#186 - Update unit tests

Issue - State: closed - Opened by eren-ck about 2 years ago

#185 - Update all methods for new datetime

Issue - State: closed - Opened by eren-ck about 2 years ago

#184 - Feature extraction - time granularity

Issue - State: closed - Opened by eren-ck about 2 years ago

#183 - Read any datetime format

Issue - State: closed - Opened by eren-ck about 2 years ago

#182 - updated example notebooks and docs for new functions

Pull Request - State: closed - Opened by TimKleinlein about 2 years ago

#181 - updated clustering function for non-integer time and added multiprocessing

Pull Request - State: closed - Opened by TimKleinlein about 2 years ago

#180 - updated functions to also work with non-integer time formats (date time / timestamps)

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#179 - io function for geojson, function for Hausdorff-distance, update of plot methods to seaborn, ordering of df columns in extract_features

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#178 - Don't merge! (just for demonstration purpose)

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#177 - extended movebank example notebook, added functions split_movement_trajectory and movement_stopping_durations, updated plot_animal_timesteps and added to init

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#176 - check handling of times in timestamp/date format for all functions

Issue - State: closed - Opened by TimKleinlein over 2 years ago

#175 - Movebank io method drop all columns except animal_id,time,x,y ?

Issue - State: closed - Opened by TimKleinlein over 2 years ago

#174 - Update all plot methods to seaborn

Issue - State: closed - Opened by eren-ck over 2 years ago

#173 - Multiprocessing

Issue - State: closed - Opened by eren-ck over 2 years ago

#172 - Trajectory similarity

Issue - State: closed - Opened by eren-ck over 2 years ago

#171 - Input GeoJSON

Issue - State: closed - Opened by eren-ck over 2 years ago

#170 - Trajectory stops duration

Issue - State: closed - Opened by eren-ck over 2 years ago

#169 - Trajectory stops

Issue - State: closed - Opened by eren-ck over 2 years ago

#168 - Extend the movebank notebook example

Issue - State: closed - Opened by eren-ck over 2 years ago

#167 - added example notebook for Movebank data, added seaborn to requirements file

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#166 - Movebank Example

Issue - State: closed - Opened by eren-ck over 2 years ago - 1 comment

#165 - Seaborn

Issue - State: closed - Opened by eren-ck over 2 years ago - 1 comment

#164 - specified python version to be <3.10

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#163 - updated changelog

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#162 - added io function for Movebank data, added function plot_geodata, changed plot_movement such that each animal is plotted with individual color, implemented warning for duplicate timestamps

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#161 - added io function for Movebank data, added function plot_geodata, changed plot_movement such that each animal is plotted with individual color

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#160 - Update change log

Issue - State: closed - Opened by eren-ck over 2 years ago - 1 comment

#159 - Case: duplicated timesteps

Issue - State: closed - Opened by eren-ck over 2 years ago - 1 comment

#158 - Geo Map

Issue - State: closed - Opened by eren-ck over 2 years ago - 1 comment

#157 - Export Animation

Issue - State: closed - Opened by eren-ck over 2 years ago - 1 comment

#156 - Visualize movers

Issue - State: closed - Opened by eren-ck over 2 years ago - 1 comment

#155 - Movebank

Issue - State: closed - Opened by eren-ck over 2 years ago - 1 comment

#154 - Pip installation

Issue - State: closed - Opened by eren-ck over 2 years ago - 2 comments

#153 - Pandas warning

Issue - State: closed - Opened by eren-ck over 2 years ago - 2 comments

#152 - fixed output of get_spatial_objects if group_output = true

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#151 - fixed errors in get_heading_difference() compute_angle_direction() outlier_detection(), updated docstrings of all public functions, changed compute_polarization, fixed unit test outlier_detection due to change in function, fixed some unit tests due to change in compute_polarization function

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#150 - fixed errors in get_heading_difference() compute_angle_direction() outlier_detection(), updated docstrings of all public functions, added two proposals how to calculate polarization, fixed unit test outlier_detection due to change in function

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#149 - added dependencies, reduced size of example notebooks, fixed euclidean_distance function, added explore_features to init, changed some preprocessing methods to be called with df instead of dict, changed compute_direction and compute_turning functions by i.a. adding function cosine_similarity, changed some functions (f.e. get_heading_difference or outlier_detection) due to changes in how direction is calculated, added functions calculate_direction_angle and calculate_turning_angle for 2D data, changed the sorting order in regrouping data, fixed how average_acceleration is calculated, replaced unit test for old clustering function with unit test for new clustering function, added labels to axes in returned dataframes in both ts_feature functions, changed multiple unit tests which failed due to new functions or other reasons

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#148 - added dependencies, reduced size of example notebooks, fixed euclidean_distance function, added explore_features to init, changed some preprocessing methods to be called with df instead of dict, changed compute_direction and compute_turning functions by i.a. adding function cosine_similarity, changed some functions (f.e. get_heading_difference or outlier_detection) due to changes in how direction is calculated, added functions calculate_direction_angle and calculate_turning_angle for 2D data, changed the sorting order in regrouping data, fixed how average_acceleration is calculated, replaced unit test for old clustering function with unit test for new clustering function, added labels to axes in returned dataframes in both ts_feature functions, changed multiple unit tests which failed due to new functions or other reasons

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago - 1 comment

#147 - added dependency, reduced size of example notebooks, fixed some unit tests and functions, fixed euclidean_distance function, warning that compute_direction is wrong, added explore_features to init, fixed preprocessing methods to be called with df , updated direction/angle function for 2d, changed order of returned DataFrame from all the functions

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#146 - added dependency, started reducing size of example notebooks, fixed some unit tests and functions, fixed euclidean_distance function, warning that compute_direction is wrong, added explore_features to init, fixed preprocessing methods to be called with df

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago - 1 comment

#145 - added Cython as dependency

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#144 - Added functions / texts to example notebooks, added some functionality / fixed some errors in src code, updated dependencies, added doc for every function of the package , fixed grouping_data() , fixed some problems found due to unit tests

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#143 - Added functions / texts to example notebooks, added some functionality / fixed some errors in src code, updated dependencies, added doc for every function of the package / fixed grouping_data()

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#142 - Methods in preprocessing take as input grouped dictionary instead of classic data frame

Issue - State: closed - Opened by TimKleinlein over 2 years ago

#141 - Added functions / texts to example notebooks, added some functionality / fixed some errors in src code, updated dependencies, added doc for every function of the package

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#140 - Added functions/texts to example notebooks, added some functionality / fixed some errors in src code, updated dependencies

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#139 - compute_direction warning message

Issue - State: closed - Opened by TimKleinlein over 2 years ago - 1 comment

#138 - Added actual dependencies and percentage loading bar for computational extensive tasks

Pull Request - State: closed - Opened by TimKleinlein over 2 years ago

#137 - Add packages

Issue - State: closed - Opened by eren-ck over 2 years ago - 1 comment

#136 - Dependencies

Issue - State: closed - Opened by eren-ck over 2 years ago - 1 comment

#135 - Performance

Issue - State: closed - Opened by eren-ck over 2 years ago

#134 - Unit tests

Issue - State: closed - Opened by eren-ck over 2 years ago

#133 - Documentation

Issue - State: closed - Opened by eren-ck over 2 years ago - 1 comment

#132 - Notebooks

Issue - State: closed - Opened by eren-ck over 2 years ago - 1 comment

#131 - Bugs

Issue - State: closed - Opened by eren-ck over 2 years ago - 1 comment

#130 - Progress bars

Issue - State: closed - Opened by eren-ck over 2 years ago - 1 comment

#129 - Input tests

Issue - State: closed - Opened by eren-ck over 2 years ago - 2 comments

#128 - fix compute_direction

Pull Request - State: closed - Opened by Manuel030 over 2 years ago

#127 - 3d support for movekit

Pull Request - State: closed - Opened by Manuel030 almost 3 years ago

#126 - more 3d functionality

Pull Request - State: closed - Opened by Manuel030 almost 3 years ago

#125 - Optional 3D Datasets -

Issue - State: closed - Opened by eren-ck almost 3 years ago

#124 - issue 119, issue 120, issue 121

Pull Request - State: closed - Opened by Manuel030 almost 3 years ago

#123 - Change hard-coded feature calls

Issue - State: closed - Opened by eren-ck almost 3 years ago

#122 - Geo-Coordinates

Issue - State: closed - Opened by eren-ck almost 3 years ago - 2 comments

#121 - Feature: distance between time

Issue - State: closed - Opened by eren-ck almost 3 years ago

#120 - Turning angle

Issue - State: closed - Opened by eren-ck almost 3 years ago - 3 comments

#119 - Delete movers - in preprocessing

Issue - State: closed - Opened by eren-ck almost 3 years ago

#118 - Documentation of movekit

Issue - State: closed - Opened by eren-ck almost 3 years ago - 1 comment

#112 - Learning Shapelets

Issue - State: closed - Opened by eren-ck almost 3 years ago

GitHub / dbvis-ukon/movekit issues and pull requests