Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / dattalab/keypoint-moseq issues and pull requests

#78 - BLAS Support Error in kpms.fit_pca

Issue - State: closed - Opened by lukeafBU over 1 year ago - 2 comments

#77 - Added parallel_message_passing flag

Pull Request - State: closed - Opened by kaijfox over 1 year ago

#76 - Kappa scan

Pull Request - State: closed - Opened by kaijfox over 1 year ago

#75 - Applying trained model to new data from SLEAP

Issue - State: closed - Opened by lencriv over 1 year ago - 4 comments

#74 - Transition graph tools from MoSeq2 for use with Keypoint MoSeq

Issue - State: closed - Opened by gregvoidman over 1 year ago - 2 comments

#73 - Issue with DLC video data

Issue - State: closed - Opened by kjmartin44 over 1 year ago - 2 comments

#72 - Reindex syllables by frequency

Issue - State: closed - Opened by calebweinreb over 1 year ago

#71 - analysis pipeline upates

Pull Request - State: closed - Opened by versey-sherry over 1 year ago

#70 - Load Data error: "keypoint_moseq' has no attribute 'load_keypoints"

Issue - State: closed - Opened by ryanschwark over 1 year ago - 5 comments

#69 - cuSolver internal error

Issue - State: closed - Opened by micahbaldonado over 1 year ago - 11 comments

#68 - Kappa scan

Issue - State: closed - Opened by calebweinreb over 1 year ago

#67 - Keep track of model logprob during fitting

Issue - State: open - Opened by calebweinreb over 1 year ago

#66 - Trajectory plots for 3D data

Issue - State: closed - Opened by calebweinreb over 1 year ago - 1 comment

#65 - Set `parallel_message_passing` flag in jax_moseq

Issue - State: closed - Opened by calebweinreb over 1 year ago - 1 comment

#64 - Grid movies for 3D data

Issue - State: closed - Opened by calebweinreb over 1 year ago - 1 comment

#63 - AttributeError: module 'keypoint_moseq' has no attribute 'load_keypoints'

Issue - State: closed - Opened by ryanschwark over 1 year ago - 1 comment

#62 - ValueError: cannot convert float NaN to integer

Issue - State: closed - Opened by ryanschwark over 1 year ago - 3 comments

#61 - AttributeError: module 'keypoint_moseq' has no attribute 'track_progress'

Issue - State: closed - Opened by ryanschwark over 1 year ago - 2 comments

#60 - plot_pcs not working wiht 3d data from SLEAP-Anipose.

Issue - State: closed - Opened by ab-madabhushi over 1 year ago - 3 comments

#59 - ModuleNotFoundError: No module named 'jupyter_bokeh'

Issue - State: closed - Opened by ryanschwark over 1 year ago - 4 comments

#58 - Loader refactor

Pull Request - State: closed - Opened by calebweinreb over 1 year ago

#57 - Unable to install using conda on Windows -- UnsatisfiableError

Issue - State: closed - Opened by ryanschwark over 1 year ago - 1 comment

#55 - Bigram viewer is dependent on grid movies

Issue - State: closed - Opened by calebweinreb over 1 year ago - 1 comment

#54 - Syllable Statistics Graphing fails with only one group

Issue - State: closed - Opened by calebweinreb over 1 year ago - 1 comment

#53 - Syllable labeler errors depending on number/existence of grid/crowd movies

Issue - State: closed - Opened by calebweinreb over 1 year ago - 1 comment

#52 - No table generated by `interactive_group_setting`

Issue - State: closed - Opened by calebweinreb over 1 year ago - 4 comments

#51 - ModuleNotFoundError: No module named 'jupyter_bokeh'

Issue - State: closed - Opened by calebweinreb over 1 year ago - 5 comments

#50 - compute data log likelihood over iterations of fitting

Issue - State: closed - Opened by r-shruthi11 over 1 year ago - 2 comments

#49 - ValueError: too many values to unpack (expected 2) When loading data

Issue - State: closed - Opened by juliagorman over 1 year ago - 1 comment

#48 - Value Error generating grid movies

Issue - State: closed - Opened by lencriv over 1 year ago - 2 comments

#47 - changing frame rate

Issue - State: closed - Opened by lencriv over 1 year ago - 1 comment

#46 - How to choose state number ？

Issue - State: closed - Opened by KelvinTao over 1 year ago - 1 comment

#45 - resume fitting from an existing checkpoint but with new data

Issue - State: closed - Opened by r-shruthi11 over 1 year ago - 3 comments

#44 - Import error

Issue - State: closed - Opened by jonathan-columbiau over 1 year ago - 1 comment

#43 - Bug fixes and feature requests since 0.1.0

Pull Request - State: closed - Opened by calebweinreb over 1 year ago

#42 - Module jax has no attribute typing

Issue - State: closed - Opened by bramn22 over 1 year ago - 1 comment

#41 - kernel dies while running PCA

Issue - State: closed - Opened by vickerse1 over 1 year ago - 2 comments

#40 - jaxlib not installed

Issue - State: closed - Opened by vickerse1 over 1 year ago - 10 comments

#39 - Could not load dynamic library 'libcudart.so.11.0'

Issue - State: closed - Opened by vickerse1 over 1 year ago - 11 comments

#38 - javascript error loading frames in GUI in jupyter notebook

Issue - State: closed - Opened by vickerse1 over 1 year ago

#37 - Issue with grid movies

Issue - State: closed - Opened by banchan86 over 1 year ago - 5 comments

#35 - feats: adding analysis components

Pull Request - State: closed - Opened by versey-sherry over 1 year ago - 1 comment

#34 - Bugfixes, new docs

Pull Request - State: closed - Opened by calebweinreb over 1 year ago

#32 - Round of bugfixes/minor improvements based on user issues

Pull Request - State: closed - Opened by calebweinreb over 1 year ago

#30 - Clarification about training requirements/optimisation

Issue - State: closed - Opened by stowerslab over 1 year ago - 2 comments

#28 - ValueError: cannot convert float NaN to integer when generating crowd movies

Issue - State: closed - Opened by juliagorman over 1 year ago - 3 comments

#26 - Fitting an AR-HMM only runs 1 iteration instead of 50 as specified

Issue - State: closed - Opened by juliagorman over 1 year ago - 10 comments

#25 - DLC data import issue

Issue - State: closed - Opened by jelrod14 over 1 year ago - 14 comments

#23 - bugfix in wrapped model fitting

Pull Request - State: closed - Opened by calebweinreb over 1 year ago

#22 - Better handling of nans and expanded docs

Pull Request - State: closed - Opened by calebweinreb over 1 year ago

#21 - Model specifications for benchmarking dataset

Issue - State: closed - Opened by NeuTTH over 1 year ago - 1 comment

#20 - Model is not defined when after opeing .h5 file

Issue - State: closed - Opened by juliagorman over 1 year ago - 1 comment

#18 - installation error missing future

Issue - State: closed - Opened by laurelrr over 1 year ago - 1 comment

#17 - bugfx in sleap loading

Pull Request - State: closed - Opened by calebweinreb over 1 year ago

#16 - Dev

Pull Request - State: closed - Opened by calebweinreb over 1 year ago

#15 - Kernel dies while fitting the full model

Issue - State: closed - Opened by Aexolowski over 1 year ago - 5 comments

#14 - Dev

Pull Request - State: closed - Opened by calebweinreb over 1 year ago

#13 - change scores issues

Issue - State: closed - Opened by czq0223 over 1 year ago - 2 comments

#12 - environment file needs to be updated

Issue - State: closed - Opened by stowerslab over 1 year ago - 1 comment

#11 - 0.0.1

Pull Request - State: closed - Opened by calebweinreb over 1 year ago

#10 - stage dev changes in 0.0.1 for release

Pull Request - State: closed - Opened by calebweinreb over 1 year ago

#9 - Software Installation Issues

Issue - State: closed - Opened by ZhaomingPsych over 1 year ago - 3 comments

#8 - Docs links

Issue - State: closed - Opened by talmo over 1 year ago - 1 comment

#7 - Add Mac (CPU) conda environment

Pull Request - State: closed - Opened by talmo over 1 year ago - 3 comments

#6 - make editable refer to root dir with setup.py

Pull Request - State: closed - Opened by a-sumo over 1 year ago - 2 comments

#5 - Jaxlib CPU issues

Issue - State: closed - Opened by juliagorman over 1 year ago - 5 comments

#4 - `find_matching_videos` is too permissive

Issue - State: closed - Opened by timsainb over 1 year ago - 1 comment

#3 - adding notice.md file for potential third-party models

Pull Request - State: closed - Opened by MMathisLab over 1 year ago

#2 - Add conda environment files

Pull Request - State: closed - Opened by talmo over 1 year ago

#1 - Fix small typo in SLEAP data loader

Pull Request - State: closed - Opened by talmo over 1 year ago - 1 comment