Ecosyste.ms: Issues

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GitHub / datajoint/workflow-miniscope issues and pull requests

#34 - Add quality metrics notebook and pytests

Pull Request - State: closed - Opened by kabilar over 1 year ago

#33 - Add GitHub Actions workflows

Pull Request - State: closed - Opened by kabilar over 1 year ago - 1 comment

#32 - Revise pytesting, update docker, add QC notebook

Pull Request - State: closed - Opened by CBroz1 almost 2 years ago

#31 - Linting and various cleanup items

Pull Request - State: closed - Opened by CBroz1 almost 2 years ago

#30 - Update README.md

Pull Request - State: closed - Opened by tdincer almost 2 years ago

#29 - Updated README

Pull Request - State: closed - Opened by kushalbakshi about 2 years ago - 1 comment

#28 - Add docstrings

Pull Request - State: closed - Opened by CBroz1 about 2 years ago

#27 - Relocate `recursive_search` and blackify

Pull Request - State: closed - Opened by CBroz1 over 2 years ago
Labels: enhancement

#26 - Docker compose revise volume mapping

Issue - State: closed - Opened by CBroz1 over 2 years ago
Labels: CI/CD

#24 - Add integration tests for `analysis.py`

Issue - State: closed - Opened by CBroz1 over 2 years ago - 1 comment
Labels: enhancement

#23 - Standard integration tests, PEP8, docker adjustments

Pull Request - State: closed - Opened by CBroz1 over 2 years ago - 8 comments
Labels: CI/CD

#22 - Add trialized data, tables, and notebook

Pull Request - State: closed - Opened by kabilar over 2 years ago

#21 - Update pipeline generation tests

Pull Request - State: closed - Opened by kabilar over 2 years ago

#20 - Update `05-explore` Jupyter notebook

Issue - State: closed - Opened by kabilar over 2 years ago
Labels: documentation

#19 - Add `04-automate` Jupyter notebook

Issue - State: closed - Opened by kabilar over 2 years ago
Labels: documentation, good first issue

#18 - Update pipeline declaration, ingestion script, and notebooks

Pull Request - State: closed - Opened by kabilar over 2 years ago - 1 comment

#17 - Update README

Pull Request - State: closed - Opened by kabilar over 2 years ago

#16 - Add issue templates

Pull Request - State: closed - Opened by kabilar over 2 years ago - 1 comment

#15 - Tutorial in video format

Issue - State: closed - Opened by kabilar almost 3 years ago - 1 comment

#14 - Add example dataset for Miniscope-DAQ V4 acquisition system

Issue - State: closed - Opened by kabilar over 3 years ago - 2 comments
Labels: Data

#13 - Add example dataset for MiniscopeAnalysis package

Issue - State: closed - Opened by kabilar over 3 years ago - 1 comment

#12 - Update standard workflow scripts

Pull Request - State: closed - Opened by kabilar about 3 years ago

#11 - Create docker-compose file for integration tests

Issue - State: closed - Opened by kabilar about 3 years ago

#10 - Create `GitHub Actions` for integration tests

Issue - State: closed - Opened by kabilar about 3 years ago - 1 comment
Labels: CI/CD

#9 - update __init__.py

Pull Request - State: closed - Opened by davidgodinez about 3 years ago - 4 comments

#8 - Create integration tests with pytest

Issue - State: closed - Opened by kabilar about 3 years ago
Labels: CI/CD

#7 - Test in DataJoint cloud environment

Issue - State: closed - Opened by kabilar over 3 years ago - 1 comment
Labels: Epic

#6 - Miniscope Beta Release

Issue - State: closed - Opened by kabilar over 3 years ago
Labels: Epic

#5 - Release Example Datasets

Issue - State: closed - Opened by kabilar over 3 years ago - 2 comments
Labels: Epic, Data

#4 - Miniscope Alpha Release

Issue - State: closed - Opened by kabilar over 3 years ago
Labels: Epic

#3 - Add instructions to `README` for setting up a local database

Issue - State: closed - Opened by kabilar over 3 years ago - 1 comment
Labels: documentation

#2 - Add support for `Miniscope-DAQ-V3` and `MiniscopeAnalysis`. Updated Jupyter Notebooks with detailed explanations.

Pull Request - State: closed - Opened by kabilar over 3 years ago - 3 comments
Labels: enhancement

#1 - Update README - `calcium-imaging` -> `miniscope`

Pull Request - State: closed - Opened by ttngu207 over 3 years ago