databio/pararead issues and pull requests

#46 - Release 0.8.0

Pull Request - State: closed - Opened by khoroshevskyi 5 months ago

#45 - error installing pararead

Issue - State: closed - Opened by mbassalbioinformatics 5 months ago - 2 comments

#44 - ImportError: No module named pararead - Python 3.8.9

Issue - State: open - Opened by gmicevic over 2 years ago - 1 comment

#43 - 0.7.0

Pull Request - State: closed - Opened by nsheff over 5 years ago

#42 - Sync dev with master

Pull Request - State: closed - Opened by vreuter over 5 years ago

#41 - limit argument is broken

Issue - State: closed - Opened by nsheff over 5 years ago - 1 comment
Labels: bug

#39 - Switch to logmuse

Issue - State: closed - Opened by vreuter almost 6 years ago - 1 comment

#38 - Cannot remove tutorial key from docs conf

Issue - State: closed - Opened by vreuter almost 6 years ago - 3 comments
Labels: docs

#37 - Mismatched type comparison in log setup

Issue - State: closed - Opened by nsheff almost 6 years ago - 1 comment

#36 - python3: no module named _version

Issue - State: closed - Opened by nsheff almost 6 years ago - 1 comment
Labels: bug

#35 - Release 0.6

Pull Request - State: closed - Opened by nsheff almost 6 years ago - 3 comments

#34 - update docstrings

Issue - State: closed - Opened by nsheff almost 6 years ago - 5 comments

#33 - Syntax compatibility; close #32

Pull Request - State: closed - Opened by vreuter almost 6 years ago

#32 - python3 comaptibility issue

Issue - State: closed - Opened by nsheff almost 6 years ago - 1 comment

#31 - Loglevel bounding logic yields always-silent behavior

Issue - State: closed - Opened by vreuter over 6 years ago - 1 comment
Labels: bug

#30 - Revert "Log level and default stream"

Pull Request - State: closed - Opened by nsheff over 6 years ago

#29 - add is_command_callable functionality

Pull Request - State: closed - Opened by nsheff over 6 years ago - 1 comment

#28 - Log level and default stream

Pull Request - State: closed - Opened by vreuter over 6 years ago

#27 - Integer verbosity levels are not handled

Issue - State: closed - Opened by nsheff over 6 years ago - 1 comment
Labels: bug

#26 - Comply with new logging setup signature

Pull Request - State: closed - Opened by vreuter over 6 years ago

#25 - Broken tests on master/dev

Issue - State: closed - Opened by vreuter over 6 years ago

#24 - First-pass logging refinements

Pull Request - State: closed - Opened by vreuter over 6 years ago - 1 comment

#23 - Logging refinements

Issue - State: closed - Opened by vreuter over 6 years ago - 1 comment

#22 - Logging refinements

Issue - State: closed - Opened by vreuter over 6 years ago - 3 comments
Labels: API, MasterTicket

#21 - Logging example

Pull Request - State: closed - Opened by vreuter over 6 years ago

#20 - Release 0.5

Pull Request - State: closed - Opened by nsheff over 6 years ago

#19 - how to attach a logger

Issue - State: closed - Opened by nsheff over 6 years ago - 13 comments

#18 - Min working example into master

Pull Request - State: closed - Opened by vreuter over 6 years ago

#17 - Sync dev with master

Pull Request - State: closed - Opened by vreuter over 6 years ago

#16 - microtest example bam file fails with multiple cores

Issue - State: closed - Opened by nsheff almost 7 years ago
Labels: bug

#15 - Basic example

Pull Request - State: closed - Opened by vreuter almost 7 years ago - 7 comments

#14 - MWE?

Issue - State: closed - Opened by caleblareau almost 7 years ago - 3 comments

#13 - Release 0.4 pypi

Pull Request - State: closed - Opened by nsheff almost 7 years ago

#12 - release 0.3

Pull Request - State: closed - Opened by nsheff about 7 years ago

#11 - Handle empty chromosomes

Pull Request - State: closed - Opened by vreuter about 7 years ago

#10 - Skip junky chromosomes

Issue - State: open - Opened by vreuter over 7 years ago - 3 comments
Labels: enhancement

#9 - quiet mode

Issue - State: closed - Opened by nsheff over 7 years ago - 9 comments

#8 - Change log, alternate install, version

Pull Request - State: closed - Opened by vreuter over 7 years ago

#7 - Version release

Pull Request - State: closed - Opened by nsheff over 7 years ago - 3 comments

#6 - Enable devmode

Pull Request - State: closed - Opened by vreuter over 7 years ago

#5 - Don't reorderer chromosomes

Pull Request - State: closed - Opened by vreuter almost 8 years ago

#4 - Dev

Pull Request - State: closed - Opened by vreuter almost 8 years ago

#3 - pip kwargs

Pull Request - State: closed - Opened by vreuter almost 8 years ago

#2 - New access for chromosome size

Pull Request - State: closed - Opened by vreuter almost 8 years ago

#1 - Packaging and updates

Pull Request - State: closed - Opened by vreuter almost 8 years ago - 9 comments

GitHub / databio/pararead issues and pull requests