databio/episb-hub issues and pull requests

#59 - using fastapi

Issue - State: open - Opened by nsheff over 5 years ago - 2 comments

#59 - using fastapi

Issue - State: open - Opened by nsheff over 5 years ago - 2 comments

#58 - simplify dev dockerfile instructions

Issue - State: closed - Opened by nsheff over 5 years ago - 3 comments

#58 - simplify dev dockerfile instructions

Issue - State: closed - Opened by nsheff over 5 years ago - 3 comments

#57 - swagger and openAPI

Issue - State: open - Opened by nsheff over 5 years ago - 4 comments

#57 - swagger and openAPI

Issue - State: open - Opened by nsheff over 5 years ago - 4 comments

#56 - dev container isn't building

Issue - State: closed - Opened by nsheff over 5 years ago - 3 comments
Labels: bug

#56 - dev container isn't building

Issue - State: closed - Opened by nsheff over 5 years ago - 3 comments
Labels: bug

#55 - making human-readable IDs

Issue - State: closed - Opened by nsheff over 5 years ago - 13 comments

#55 - making human-readable IDs

Issue - State: closed - Opened by nsheff over 5 years ago - 13 comments

#54 - hub API docs

Issue - State: open - Opened by nsheff over 5 years ago

#54 - hub API docs

Issue - State: open - Opened by nsheff over 5 years ago

#53 - episb.org down

Issue - State: closed - Opened by nsheff over 5 years ago - 5 comments

#53 - episb.org down

Issue - State: closed - Opened by nsheff over 5 years ago - 5 comments

#52 - Release version 0.3

Pull Request - State: open - Opened by nsheff over 5 years ago

#52 - Release version 0.3

Pull Request - State: open - Opened by nsheff over 5 years ago

#51 - Implements #50

Pull Request - State: closed - Opened by oddodaoddo over 5 years ago - 2 comments

#51 - Implements #50

Pull Request - State: closed - Opened by oddodaoddo over 5 years ago - 2 comments

#50 - display version

Issue - State: closed - Opened by nsheff over 5 years ago - 1 comment

#50 - display version

Issue - State: closed - Opened by nsheff over 5 years ago - 1 comment

#49 - Individual web pages for each entity

Issue - State: open - Opened by nsheff over 5 years ago

#49 - Individual web pages for each entity

Issue - State: open - Opened by nsheff over 5 years ago

#48 - visual display of annotation values for individual segments

Issue - State: open - Opened by nsheff over 5 years ago
Labels: brainstorming

#48 - visual display of annotation values for individual segments

Issue - State: open - Opened by nsheff over 5 years ago
Labels: brainstorming

#47 - update retrieve segments interface

Issue - State: open - Opened by nsheff over 5 years ago

#47 - update retrieve segments interface

Issue - State: open - Opened by nsheff over 5 years ago

#46 - Implement Segmentation subsets

Issue - State: open - Opened by nsheff over 5 years ago - 1 comment

#46 - Implement Segmentation subsets

Issue - State: open - Opened by nsheff over 5 years ago - 1 comment

#45 - Issue 36

Pull Request - State: closed - Opened by oddodaoddo over 5 years ago - 2 comments

#45 - Issue 36

Pull Request - State: closed - Opened by oddodaoddo over 5 years ago - 2 comments

#44 - Remove subscription interface

Issue - State: open - Opened by oddodaoddo over 5 years ago

#44 - Remove subscription interface

Issue - State: open - Opened by oddodaoddo over 5 years ago

#43 - Issue 32

Pull Request - State: closed - Opened by oddodaoddo over 5 years ago

#43 - Issue 32

Pull Request - State: closed - Opened by oddodaoddo over 5 years ago

#42 - Issue 32

Pull Request - State: closed - Opened by oddodaoddo over 5 years ago

#42 - Issue 32

Pull Request - State: closed - Opened by oddodaoddo over 5 years ago

#41 - Include json link to segmentation filter results

Issue - State: open - Opened by oddodaoddo almost 6 years ago

#41 - Include json link to segmentation filter results

Issue - State: open - Opened by oddodaoddo almost 6 years ago

#40 - Segmentation filter fails if an experiment in a series is left unselected

Issue - State: closed - Opened by oddodaoddo almost 6 years ago

#40 - Segmentation filter fails if an experiment in a series is left unselected

Issue - State: closed - Opened by oddodaoddo almost 6 years ago

#39 - Issue 37

Pull Request - State: closed - Opened by oddodaoddo almost 6 years ago - 2 comments

#39 - Issue 37

Pull Request - State: closed - Opened by oddodaoddo almost 6 years ago - 2 comments

#38 - #20 - categorize EPISB documents

Pull Request - State: closed - Opened by oddodaoddo almost 6 years ago - 1 comment

#38 - #20 - categorize EPISB documents

Pull Request - State: closed - Opened by oddodaoddo almost 6 years ago - 1 comment

#37 - hub should have configurable default providers

Issue - State: closed - Opened by nsheff almost 6 years ago - 3 comments
Labels: priority-low

#37 - hub should have configurable default providers

Issue - State: closed - Opened by nsheff almost 6 years ago - 3 comments
Labels: priority-low

#36 - Refining subscription interface

Issue - State: closed - Opened by nsheff almost 6 years ago - 1 comment

#36 - Refining subscription interface

Issue - State: closed - Opened by nsheff almost 6 years ago - 1 comment

#35 - Segmentation filter extra rules

Issue - State: closed - Opened by nsheff almost 6 years ago - 41 comments

#35 - Segmentation filter extra rules

Issue - State: closed - Opened by nsheff almost 6 years ago - 41 comments

#34 - BED file returns

Issue - State: closed - Opened by nsheff almost 6 years ago - 14 comments

#34 - BED file returns

Issue - State: closed - Opened by nsheff almost 6 years ago - 14 comments

#33 - API point: Experiment matrix

Issue - State: open - Opened by nsheff almost 6 years ago - 24 comments
Labels: priority-high, query-type

#33 - API point: Experiment matrix

Issue - State: open - Opened by nsheff almost 6 years ago - 24 comments
Labels: priority-high, query-type

#32 - Example API queries

Issue - State: closed - Opened by nsheff almost 6 years ago - 10 comments
Labels: docs

#32 - Example API queries

Issue - State: closed - Opened by nsheff almost 6 years ago - 10 comments
Labels: docs

#31 - set up down server notifications

Issue - State: closed - Opened by nsheff almost 6 years ago - 2 comments
Labels: bug

#31 - set up down server notifications

Issue - State: closed - Opened by nsheff almost 6 years ago - 2 comments
Labels: bug

#30 - "Live" slider value updating

Issue - State: closed - Opened by stolarczyk almost 6 years ago - 4 comments
Labels: enhancement, priority-low

#30 - "Live" slider value updating

Issue - State: closed - Opened by stolarczyk almost 6 years ago - 4 comments
Labels: enhancement, priority-low

#29 - default subscription

Issue - State: closed - Opened by nsheff almost 6 years ago - 4 comments
Labels: bug

#29 - default subscription

Issue - State: closed - Opened by nsheff almost 6 years ago - 4 comments
Labels: bug

#28 - region query broken again

Issue - State: closed - Opened by nsheff almost 6 years ago - 4 comments
Labels: bug

#28 - region query broken again

Issue - State: closed - Opened by nsheff almost 6 years ago - 4 comments
Labels: bug

#27 - Segmentation filter - next step we want after drilling down to experiment

Issue - State: closed - Opened by oddodaoddo almost 6 years ago - 2 comments

#27 - Segmentation filter - next step we want after drilling down to experiment

Issue - State: closed - Opened by oddodaoddo almost 6 years ago - 2 comments

#26 - theme

Issue - State: closed - Opened by nsheff almost 6 years ago - 2 comments
Labels: docs

#26 - theme

Issue - State: closed - Opened by nsheff almost 6 years ago - 2 comments
Labels: docs

#25 - query modes are not populating

Issue - State: closed - Opened by nsheff almost 6 years ago - 3 comments
Labels: bug

#25 - query modes are not populating

Issue - State: closed - Opened by nsheff almost 6 years ago - 3 comments
Labels: bug

#24 - Segmentation filter dropdown

Issue - State: closed - Opened by nsheff almost 6 years ago - 4 comments

#24 - Segmentation filter dropdown

Issue - State: closed - Opened by nsheff almost 6 years ago - 4 comments

#23 - docker image push denied - which image is getting deployed?

Issue - State: closed - Opened by oddodaoddo almost 6 years ago - 10 comments

#23 - docker image push denied - which image is getting deployed?

Issue - State: closed - Opened by oddodaoddo almost 6 years ago - 10 comments

#22 - Add code to read provider-interface from episb-provider

Issue - State: closed - Opened by oddodaoddo almost 6 years ago - 2 comments

#22 - Add code to read provider-interface from episb-provider

Issue - State: closed - Opened by oddodaoddo almost 6 years ago - 2 comments

#21 - Document provider-interface API point

Issue - State: closed - Opened by oddodaoddo almost 6 years ago
Labels: docs

#21 - Document provider-interface API point

Issue - State: closed - Opened by oddodaoddo almost 6 years ago
Labels: docs

#20 - Docs category organization

Issue - State: closed - Opened by nsheff almost 6 years ago - 2 comments
Labels: docs

#19 - links to query explanations

Issue - State: closed - Opened by nsheff almost 6 years ago - 1 comment
Labels: docs

#19 - links to query explanations

Issue - State: closed - Opened by nsheff almost 6 years ago - 1 comment
Labels: docs

#18 - Query: API Result Count / Paging

Issue - State: closed - Opened by nmagee almost 6 years ago - 4 comments

#18 - Query: API Result Count / Paging

Issue - State: closed - Opened by nmagee almost 6 years ago - 4 comments

#17 - API docs structure suggestion

Issue - State: closed - Opened by nsheff almost 6 years ago - 7 comments
Labels: docs

#17 - API docs structure suggestion

Issue - State: closed - Opened by nsheff almost 6 years ago - 7 comments
Labels: docs

#16 - recapture previous changes

Issue - State: closed - Opened by nsheff almost 6 years ago - 1 comment

#16 - recapture previous changes

Issue - State: closed - Opened by nsheff almost 6 years ago - 1 comment

#15 - #14 - fix flask app to use chromosomes while searching regions

Pull Request - State: closed - Opened by oddodaoddo almost 6 years ago - 2 comments

#15 - #14 - fix flask app to use chromosomes while searching regions

Pull Request - State: closed - Opened by oddodaoddo almost 6 years ago - 2 comments

#14 - Region query needs to include chromosome

Issue - State: closed - Opened by nsheff almost 6 years ago - 12 comments
Labels: bug

#14 - Region query needs to include chromosome

Issue - State: closed - Opened by nsheff almost 6 years ago - 12 comments
Labels: bug

#13 - How to build docs locally and deploy on website

Issue - State: closed - Opened by oddodaoddo almost 6 years ago - 11 comments

#12 - fix docs to point at dev branch

Issue - State: closed - Opened by nsheff almost 6 years ago - 2 comments
Labels: docs

#11 - region query is no longer working

Issue - State: closed - Opened by nsheff almost 6 years ago - 14 comments
Labels: bug

#10 - sync dev to master

Pull Request - State: closed - Opened by nsheff almost 6 years ago

#9 - Make page titles variable

Issue - State: open - Opened by nsheff almost 6 years ago

#8 - Query: branching out to interacting regions

Issue - State: open - Opened by nsheff almost 6 years ago
Labels: query-type, priority-low

#7 - Query ("Match"): Retrieve best segmentation for a given set of regions

Issue - State: open - Opened by nsheff almost 6 years ago - 3 comments
Labels: query-type

#6 - Query: retreiving annotation values for given regions

Issue - State: closed - Opened by nsheff almost 6 years ago - 9 comments
Labels: query-type

#5 - Implement a "provider subscriptions" web GUI in the hub

Issue - State: closed - Opened by nsheff almost 6 years ago - 23 comments
Labels: priority-high

GitHub / databio/episb-hub issues and pull requests