Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / darwin-eu-dev/PatientProfiles issues and pull requests

#557 - accept concept set expressions in functions that have a concept_set parameter

Issue - State: open - Opened by ablack3 8 months ago - 1 comment
Labels: needs dicussion

#553 - solve deprecation warnings that are internal before release

Issue - State: closed - Opened by catalamarti 9 months ago
Labels: enhancement

#534 - Warn new cols

Pull Request - State: closed - Opened by catalamarti 9 months ago

#532 - window default: -inf to inf

Issue - State: closed - Opened by edward-burn 9 months ago - 3 comments
Labels: enhancement

#530 - Flexibility around compute behaviour

Issue - State: closed - Opened by edward-burn 9 months ago - 5 comments
Labels: enhancement

#529 - edit vignette on adding patient characteristics

Pull Request - State: closed - Opened by edward-burn 9 months ago

#521 - fix typos

Pull Request - State: closed - Opened by edward-burn 9 months ago

#517 - restructure vignettes

Pull Request - State: closed - Opened by edward-burn 9 months ago

#513 - Warn overwrite columns #510

Pull Request - State: closed - Opened by catalamarti 9 months ago - 1 comment

#511 - allow multiple windows in addInObservation

Pull Request - State: closed - Opened by catalamarti 9 months ago

#509 - Update readme and make sure it works

Issue - State: closed - Opened by catalamarti 9 months ago - 1 comment
Labels: documentation

#496 - create summariseResult vignette

Issue - State: closed - Opened by catalamarti 9 months ago - 1 comment
Labels: documentation

#465 - addLargeScaleCharacteristics error in sql server

Issue - State: closed - Opened by edward-burn 9 months ago - 7 comments
Labels: needs dicussion

#429 - move CDMConnector::summarize_quantile to PatientProfiles?

Issue - State: closed - Opened by ablack3 10 months ago - 2 comments
Labels: needs dicussion

#422 - whether to check if it is death in the inObservation function?

Issue - State: closed - Opened by catalamarti 11 months ago - 3 comments
Labels: needs dicussion, later

#421 - error with lsc and mock

Issue - State: closed - Opened by catalamarti 11 months ago - 2 comments
Labels: later

#417 - Update arguments of summariseLargeScaleCharacteristics

Pull Request - State: closed - Opened by martaalcalde 12 months ago

#415 - How to get calendarYear strata from the targerCohort after intersecting

Issue - State: open - Opened by cebarboza 12 months ago - 2 comments

#413 - allow targetEndDate NULL for addConceptIntersect

Issue - State: closed - Opened by catalamarti 12 months ago

#411 - option to exclude concepts from lsc

Issue - State: open - Opened by catalamarti about 1 year ago

#410 - add index and censor parameters

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#409 - Suggestions for vignette Get cohort intersections

Issue - State: open - Opened by mderidder95 about 1 year ago

#408 - Suggestions for vignette Get patients' characteristics

Issue - State: open - Opened by mderidder95 about 1 year ago

#407 - casing for date empty columns

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#406 - New missing columns does not respect casing

Issue - State: closed - Opened by catalamarti about 1 year ago - 1 comment

#405 - remove includeSource option from addLSc

Issue - State: closed - Opened by catalamarti about 1 year ago - 1 comment

#404 - exclude conceptId in addLSC

Issue - State: open - Opened by catalamarti about 1 year ago

#403 - add targetCohortId

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#402 - issues with copy = TRUE argument in dplyr commands on Snowflake

Issue - State: open - Opened by ablack3 about 1 year ago - 12 comments

#401 - addTableIntersect function

Issue - State: open - Opened by catalamarti about 1 year ago

#400 - Update addConceptIntersect.R

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#399 - Add indexDate and censorDate in all functions time related

Issue - State: closed - Opened by catalamarti about 1 year ago - 1 comment

#398 - add otherVariables function

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#397 - add large scale characteristics option

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#396 - add Concept argument

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#395 - Issue with summariseLargeScaleCharacteristics

Issue - State: closed - Opened by pablosg713 about 1 year ago - 2 comments

#394 - sql over 100 characteristics in addCohortIntersectFlag

Issue - State: closed - Opened by edward-burn about 1 year ago

#393 - Issue 379

Pull Request - State: closed - Opened by MimiYuchenGuo about 1 year ago - 1 comment

#392 - update

Pull Request - State: closed - Opened by MimiYuchenGuo about 1 year ago

#391 - Add conceptIntersect option in summariseCharacteristics

Issue - State: closed - Opened by catalamarti about 1 year ago - 1 comment

#390 - Error with summariseCharacteristics when running in Snowflake

Issue - State: closed - Opened by cbarbozaerasmus about 1 year ago - 9 comments

#389 - Update addCategories.R

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#388 - Assert write schema is provided

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#387 - function to hide columns in gt output

Issue - State: open - Opened by catalamarti about 1 year ago

#386 - summariseCharacteristics - option not to summarise demographics

Issue - State: closed - Opened by edward-burn about 1 year ago - 1 comment

#385 - Print progress in summariseCharacteristics

Issue - State: open - Opened by edward-burn about 1 year ago
Labels: enhancement

#384 - Should we allow to provide cohortId/targetCohortId as cohortName

Issue - State: open - Opened by catalamarti about 1 year ago - 1 comment
Labels: later

#383 - prepare release

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#382 - summariseResult include min and max as default

Issue - State: closed - Opened by catalamarti about 1 year ago - 1 comment

#381 - summariseCharacteristics remove tableIntersect default

Issue - State: closed - Opened by catalamarti about 1 year ago - 1 comment

#380 - IQR and range functions

Issue - State: closed - Opened by catalamarti about 1 year ago - 2 comments

#379 - Overwriting a column using addCohortIntersectionFlag produces NAs

Issue - State: closed - Opened by mderidder95 about 1 year ago - 2 comments

#378 - New suppress count

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#377 - add categories allow infinite and dates

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#376 - Order summary

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#375 - Update summariseResult.R

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#374 - allow variables and functions to not be a list

Issue - State: closed - Opened by catalamarti about 1 year ago - 1 comment

#373 - order variables following to column order

Issue - State: closed - Opened by catalamarti about 1 year ago - 1 comment

#372 - Missing value

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#371 - more general function for suppress counts

Issue - State: closed - Opened by catalamarti about 1 year ago - 1 comment

#370 - addLSC

Issue - State: closed - Opened by catalamarti about 1 year ago - 1 comment

#369 - Do we want to include addConceptIntersect?

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#368 - plotResult()

Issue - State: open - Opened by edward-burn about 1 year ago

#367 - addFromConceptSet

Issue - State: closed - Opened by edward-burn about 1 year ago - 2 comments

#366 - Think about renaming getConceptName, getStartName, getEndName

Issue - State: open - Opened by edward-burn about 1 year ago - 4 comments

#365 - missingCategoryValue is available in addCategories but not add age

Issue - State: open - Opened by edward-burn about 1 year ago - 1 comment

#364 - Should we allow inf as an upper limit for categories?

Issue - State: closed - Opened by edward-burn about 1 year ago - 4 comments

#363 - Date support for addCategories

Issue - State: open - Opened by edward-burn about 1 year ago - 2 comments

#362 - add checks lsc

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#361 - update calculate date in database side

Pull Request - State: closed - Opened by ilovemane about 1 year ago - 2 comments

#360 - Eliminate tablePrefix parameter

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#359 - Update summariseLargeScaleCharacteristics.R

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#358 - style package

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#357 - Benchmark function

Issue - State: open - Opened by edward-burn about 1 year ago - 4 comments

#356 - This warning appears in SummariseCharacteristics

Issue - State: open - Opened by catalamarti about 1 year ago

#355 - check inputs of summariseLSC

Issue - State: closed - Opened by catalamarti about 1 year ago - 1 comment

#354 - Style package

Issue - State: closed - Opened by catalamarti about 1 year ago - 1 comment

#353 - addIntersect flag error with tablePrefix

Issue - State: closed - Opened by edward-burn about 1 year ago - 3 comments

#352 - Reducing number of computes in addIntersect

Issue - State: closed - Opened by edward-burn about 1 year ago - 5 comments

#351 - Change strata behaviour

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#350 - change strata behaviour

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#349 - Update test-addDemographics.R

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#347 - Large scale characteristics reexport

Issue - State: closed - Opened by catalamarti about 1 year ago - 2 comments

#346 - Large scale characterisation format

Issue - State: closed - Opened by catalamarti about 1 year ago - 5 comments

#345 - Large scale characteristics

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#344 - addIntersect - get all windows at the same time

Issue - State: closed - Opened by edward-burn about 1 year ago
Labels: enhancement

#343 - eliminate arguments from suppressCounts

Pull Request - State: closed - Opened by catalamarti about 1 year ago

#342 - change strata behaviour

Issue - State: closed - Opened by catalamarti about 1 year ago - 1 comment

#340 - Update

Pull Request - State: closed - Opened by MimiYuchenGuo about 1 year ago

#339 - Update summariseResult.R

Pull Request - State: closed - Opened by ilovemane about 1 year ago

#338 - summariseCharacteristics and summariseResult crashes if cohort is empty

Issue - State: closed - Opened by catalamarti about 1 year ago - 2 comments