darwin-eu-dev/PatientProfiles issues and pull requests

#700 - add density estimate

Pull Request - State: closed - Opened by catalamarti 26 days ago

#699 - Issue 697

Pull Request - State: closed - Opened by catalamarti 26 days ago

#698 - add density as option in estimates (summariseResult)

Issue - State: closed - Opened by catalamarti about 1 month ago - 1 comment
Labels: enhancement

#697 - ObservationPeriodId

Issue - State: closed - Opened by catalamarti about 1 month ago - 1 comment
Labels: enhancement

#696 - addObservationPeriodIdQuery() ?

Issue - State: closed - Opened by catalamarti about 1 month ago
Labels: enhancement

#695 - use og dev

Pull Request - State: closed - Opened by edward-burn about 2 months ago

#694 - addObservationPeriodId function

Pull Request - State: closed - Opened by edward-burn about 2 months ago

#693 - addObservationPeriodId

Issue - State: closed - Opened by edward-burn about 2 months ago

#692 - NOT TO MERGE: check against og dev

Pull Request - State: closed - Opened by edward-burn about 2 months ago

#691 - Possible to remove addInObservation from .addIntersect?

Issue - State: open - Opened by edward-burn about 2 months ago
Labels: enhancement

#690 - additional computes in addIntersect

Pull Request - State: closed - Opened by edward-burn about 2 months ago

#689 - start tutorial

Pull Request - State: closed - Opened by catalamarti 2 months ago

#688 - reorganise website

Pull Request - State: closed - Opened by catalamarti 2 months ago

#687 - Release 1.1.1

Pull Request - State: closed - Opened by catalamarti 2 months ago

#686 - internal summariseResult

Pull Request - State: closed - Opened by nmercadeb 2 months ago

#685 - change internal summariseResult function

Issue - State: closed - Opened by catalamarti 2 months ago
Labels: enhancement

#684 - add cdm and cohort name - overwrite behaviour and tests

Pull Request - State: closed - Opened by nmercadeb 2 months ago

#683 - nan and inf produced to NA

Pull Request - State: closed - Opened by nmercadeb 2 months ago

#682 - check that add functions overwrite

Issue - State: closed - Opened by catalamarti 2 months ago

#681 - Update pkgdown.yaml

Pull Request - State: closed - Opened by catalamarti 2 months ago

#680 - different behavior addCdmName and addCohortName

Issue - State: closed - Opened by catalamarti 2 months ago - 2 comments
Labels: enhancement

#679 - improve error message table name argument #675

Pull Request - State: closed - Opened by nmercadeb 2 months ago - 1 comment

#678 - add episode table

Pull Request - State: closed - Opened by nmercadeb 2 months ago

#677 - missingAgeGroupValue() and missingSexValue() arguments not working

Issue - State: closed - Opened by martaalcalde 2 months ago - 1 comment

#676 - support regimen domain in addConceptIntersectFlag and similar functions

Issue - State: closed - Opened by ablack3 3 months ago - 2 comments

#675 - Uninformative error if targetCohortTable is reference to table rather than name

Issue - State: closed - Opened by edward-burn 3 months ago

#674 - estimate value `NA` when variable is empty for all estimates

Issue - State: closed - Opened by nmercadeb 3 months ago

#673 - Should warnings for empty and NA groups be suppressed when using summariseData?

Issue - State: closed - Opened by ablack3 7 months ago - 1 comment

#672 - fixes addCategories and addIntersect Flag

Pull Request - State: closed - Opened by ilovemane 3 months ago

#671 - Possibly a double-counting bug in addTableIntersectCount

Issue - State: closed - Opened by OskarGauffin 4 months ago - 1 comment

#670 - addCategories for dates not working as expected

Issue - State: closed - Opened by daniellenewby 4 months ago - 1 comment

#669 - patient profiles 1.1.0 release

Pull Request - State: closed - Opened by catalamarti 4 months ago

#668 - Add query functions

Pull Request - State: closed - Opened by catalamarti 4 months ago - 1 comment

#667 - issue 530

Pull Request - State: closed - Opened by catalamarti 4 months ago

#666 - addDemographicsQuery

Issue - State: closed - Opened by catalamarti 4 months ago

#665 - include records with missing end date

Pull Request - State: closed - Opened by edward-burn 4 months ago

#664 - addConceptIntersectFlag will not consider records where end date is missing

Issue - State: closed - Opened by ablack3 5 months ago - 2 comments

#663 - preapre tests to work with different db

Issue - State: closed - Opened by nmercadeb 5 months ago - 1 comment

#660 - correct strata when it is NA

Issue - State: closed - Opened by catalamarti 5 months ago

#659 - achieve 100% test coverage

Issue - State: closed - Opened by catalamarti 5 months ago

#658 - remove checkmate as a dependency

Issue - State: closed - Opened by catalamarti 5 months ago - 2 comments
Labels: enhancement, good first issue

#657 - add sum function for numeric and integer data types.

Pull Request - State: closed - Opened by ablack3 5 months ago - 1 comment

#656 - add sum as estimates

Pull Request - State: closed - Opened by catalamarti 5 months ago

#655 - sum result

Issue - State: closed - Opened by edward-burn 5 months ago

#654 - Overwriting column when "addAge" twice

Issue - State: closed - Opened by ajoedicke 5 months ago - 2 comments

#653 - allow missingValue (age and sex) to be NA_character

Issue - State: closed - Opened by catalamarti 5 months ago

#652 - `ageDefaultMonth/Day` -> `ageMissingMonth/Day` ?

Issue - State: closed - Opened by catalamarti 5 months ago - 2 comments

#651 - version 1.0 release

Pull Request - State: closed - Opened by catalamarti 5 months ago

#650 - Warning when using addCohortIntersectCount()

Issue - State: closed - Opened by martaalcalde 5 months ago - 1 comment

#649 - user feedback: variables without matching functions are silently ignored in summarizeResult

Issue - State: closed - Opened by ablack3 5 months ago - 2 comments

#648 - custom strata names

Issue - State: closed - Opened by edward-burn 5 months ago - 1 comment

#647 - SR settings

Pull Request - State: closed - Opened by nmercadeb 5 months ago

#646 - allow indexDate to be a date (not a column)

Issue - State: open - Opened by catalamarti 5 months ago - 2 comments
Labels: enhancement

#645 - package details and result type to settings in summarisedResult

Issue - State: closed - Opened by nmercadeb 5 months ago

#644 - show citation in readme

Issue - State: closed - Opened by edward-burn 6 months ago

#643 - summariseResult when no analyses being performed

Issue - State: closed - Opened by edward-burn 6 months ago

#642 - considering changing a couple lines of codes that uses endDateColumn

Issue - State: closed - Opened by xihang-chen 6 months ago - 2 comments

#641 - updating addCategories tests

Pull Request - State: closed - Opened by xihang-chen 6 months ago

#638 - include weight column in summariseResult

Issue - State: open - Opened by catalamarti 6 months ago
Labels: enhancement

#637 - bug in addTableIntersectFlag

Issue - State: closed - Opened by nmercadeb 6 months ago - 1 comment

#636 - Issue 634

Pull Request - State: closed - Opened by catalamarti 6 months ago

#635 - vignettes

Pull Request - State: closed - Opened by catalamarti 6 months ago

#634 - Print message in SummariseResult if data is being collected to R

Issue - State: closed - Opened by edward-burn 6 months ago - 1 comment

#633 - Smd

Pull Request - State: open - Opened by MimiYuchenGuo 6 months ago

#632 - update

Pull Request - State: closed - Opened by MimiYuchenGuo 6 months ago

#631 - delete tests that will go to cohortcharacteristics

Pull Request - State: closed - Opened by catalamarti 6 months ago

#630 - Add lsc exp

Pull Request - State: closed - Opened by catalamarti 6 months ago

#629 - Summarise vignette

Pull Request - State: closed - Opened by catalamarti 6 months ago

#628 - updating addTableIntersect tests

Pull Request - State: closed - Opened by xihang-chen 6 months ago - 3 comments

#627 - update addDeath behavior

Pull Request - State: closed - Opened by catalamarti 6 months ago

#626 - tag addLSC as experimental

Issue - State: closed - Opened by catalamarti 6 months ago

#625 - add death functions

Pull Request - State: closed - Opened by edward-burn 6 months ago

#624 - new vignettes structure

Pull Request - State: closed - Opened by catalamarti 6 months ago

#623 - deprecate CohortCharacteristics

Pull Request - State: closed - Opened by catalamarti 6 months ago

#622 - Check test coverage and identify not tested functionalities

Issue - State: closed - Opened by catalamarti 6 months ago - 1 comment

#619 - Include all zeros in summarizeResult output

Issue - State: closed - Opened by ablack3 6 months ago - 2 comments

#616 - Feature request addDateofDeath function

Issue - State: closed - Opened by ablack3 6 months ago - 5 comments

#596 - should we convert prior observation, future observation and age to integers?

Issue - State: closed - Opened by catalamarti 6 months ago - 2 comments

#574 - plotCharacteristics

Issue - State: closed - Opened by catalamarti 6 months ago - 4 comments

#573 - use internal function to also plotCohortTimming and plotCohortOverlap

Issue - State: closed - Opened by catalamarti 6 months ago - 7 comments

#567 - mirror this repo in darwin-eu (public repo) and create github releases that match cran releases.

Issue - State: closed - Opened by ablack3 7 months ago - 10 comments

#557 - accept concept set expressions in functions that have a concept_set parameter

Issue - State: open - Opened by ablack3 7 months ago - 1 comment
Labels: needs dicussion

#553 - solve deprecation warnings that are internal before release

Issue - State: closed - Opened by catalamarti 7 months ago
Labels: enhancement

#548 - should summarize result download the full cohort table before summarizing or should it summarize the data in the database?

Issue - State: closed - Opened by ablack3 7 months ago - 3 comments
Labels: later

#534 - Warn new cols

Pull Request - State: closed - Opened by catalamarti 7 months ago

#532 - window default: -inf to inf

Issue - State: closed - Opened by edward-burn 7 months ago - 3 comments
Labels: enhancement

#530 - Flexibility around compute behaviour

Issue - State: closed - Opened by edward-burn 7 months ago - 5 comments
Labels: enhancement

#529 - edit vignette on adding patient characteristics

Pull Request - State: closed - Opened by edward-burn 7 months ago

#521 - fix typos

Pull Request - State: closed - Opened by edward-burn 7 months ago

#517 - restructure vignettes

Pull Request - State: closed - Opened by edward-burn 7 months ago

#513 - Warn overwrite columns #510

Pull Request - State: closed - Opened by catalamarti 7 months ago - 1 comment

#511 - allow multiple windows in addInObservation

Pull Request - State: closed - Opened by catalamarti 7 months ago

#509 - Update readme and make sure it works

Issue - State: closed - Opened by catalamarti 7 months ago - 1 comment
Labels: documentation

#508 - Final read of all documentation and make sure that it is consistent across different vignettes

Issue - State: closed - Opened by catalamarti 7 months ago
Labels: documentation

#496 - create summariseResult vignette

Issue - State: closed - Opened by catalamarti 7 months ago - 1 comment
Labels: documentation

#465 - addLargeScaleCharacteristics error in sql server

Issue - State: closed - Opened by edward-burn 7 months ago - 7 comments
Labels: needs dicussion

#429 - move CDMConnector::summarize_quantile to PatientProfiles?

Issue - State: closed - Opened by ablack3 8 months ago - 2 comments
Labels: needs dicussion

#422 - whether to check if it is death in the inObservation function?

Issue - State: closed - Opened by catalamarti 9 months ago - 3 comments
Labels: needs dicussion, later

#421 - error with lsc and mock

Issue - State: closed - Opened by catalamarti 9 months ago - 2 comments
Labels: later

#419 - Do we want to put NA in the flag if the person is not in observation?

Issue - State: open - Opened by catalamarti 10 months ago - 1 comment

GitHub / darwin-eu-dev/PatientProfiles issues and pull requests