danlwarren/enmtools issues and pull requests

#270 - Tidymodels progress

Pull Request - State: closed - Opened by rdinnager 16 days ago - 1 comment

#269 - Potential bug in the enmtools.ecospat.id and enmtools.ecospat.bg functions?

Issue - State: closed - Opened by yucheols about 1 month ago - 12 comments

#268 - Maybe set up this analysis for enmtools.clade objects?

Issue - State: open - Opened by danlwarren 2 months ago

#267 - Consider switching env.overlap and env.breadth to Sobol sequences using the rsobol package

Issue - State: open - Opened by danlwarren 4 months ago

#266 - Fixing plots

Pull Request - State: closed - Opened by danlwarren 6 months ago

#265 - RTS test plots all using empirical train AUC for dashed vertical line

Issue - State: closed - Opened by danlwarren 6 months ago

#264 - Error in Warren's I Calculation

Issue - State: closed - Opened by abbycperkins 8 months ago - 3 comments

#263 - Updating for 1.1.3

Pull Request - State: closed - Opened by danlwarren 10 months ago

#262 - Fixing visualize.enm

Pull Request - State: closed - Opened by danlwarren 10 months ago

#261 - Buffer fixes

Pull Request - State: closed - Opened by danlwarren 10 months ago

#260 - Fatal Issue encountered when running enmtool.aoc for any ENMs

Issue - State: closed - Opened by jomhoff 10 months ago - 3 comments

#260 - Fatal Issue encountered when running enmtool.aoc for any ENMs

Issue - State: open - Opened by jomhoff 10 months ago - 3 comments

#259 - Idea for improving significance testing via RTS-style tests for ENMTools 2

Issue - State: open - Opened by danlwarren 11 months ago - 1 comment
Labels: Enhancement, ENMTools 2.0

#258 - Add new metrics from Somodi et al.?

Issue - State: open - Opened by danlwarren 11 months ago
Labels: Enhancement, ENMTools 2.0

#257 - In enmtools.maxent: .local(object, ...)：missing layers (or wrong names)

Issue - State: closed - Opened by JuiTse 11 months ago - 3 comments

#256 - combine.species doesn't work with one species

Issue - State: closed - Opened by danlwarren about 1 year ago - 1 comment

#255 - Add links to DESCRIPTION

Pull Request - State: closed - Opened by olivroy about 1 year ago

#254 - Fixing ecospat plots and disabling ranger tests

Pull Request - State: closed - Opened by danlwarren about 1 year ago

#254 - Fixing ecospat plots and disabling ranger tests

Pull Request - State: open - Opened by danlwarren about 1 year ago

#254 - Fixing ecospat plots and disabling ranger tests

Pull Request - State: closed - Opened by danlwarren about 1 year ago

#253 - Many small bug fixes

Pull Request - State: closed - Opened by danlwarren about 1 year ago

#252 - interactive.plot.enmtools.species isn't working correctly

Issue - State: closed - Opened by danlwarren about 1 year ago - 2 comments

#252 - interactive.plot.enmtools.species isn't working correctly

Issue - State: closed - Opened by danlwarren about 1 year ago - 2 comments

#252 - interactive.plot.enmtools.species isn't working correctly

Issue - State: closed - Opened by danlwarren about 1 year ago - 2 comments

#251 - species.from.file returning "Error in if (!is.na(presence.points)) { : the condition has length > 1"

Issue - State: closed - Opened by danlwarren about 1 year ago - 1 comment

#251 - species.from.file returning "Error in if (!is.na(presence.points)) { : the condition has length > 1"

Issue - State: closed - Opened by danlwarren about 1 year ago - 1 comment

#250 - check.species is no longer reordering lat/lon columns correctly

Issue - State: closed - Opened by danlwarren about 1 year ago - 1 comment

#250 - check.species is no longer reordering lat/lon columns correctly

Issue - State: closed - Opened by danlwarren about 1 year ago - 1 comment

#249 - An unusual value for Shoener's D calculated using raster.overlap

Issue - State: closed - Opened by momeni133 about 1 year ago - 2 comments

#248 - Ecospat background tests broken

Issue - State: closed - Opened by danlwarren about 1 year ago - 1 comment

#248 - Ecospat background tests broken

Issue - State: open - Opened by danlwarren about 1 year ago

#247 - Fixing clamping issue with identity test

Pull Request - State: closed - Opened by danlwarren about 1 year ago

#246 - Issue with clamp.env while running identity.test()

Issue - State: closed - Opened by ascanioalfredoa about 1 year ago - 2 comments

#245 - Different Empirical overlap values for identity and background tests

Issue - State: closed - Opened by momeni133 about 1 year ago - 7 comments

#244 - ggplot warnings recommend including after_stat instead

Pull Request - State: closed - Opened by stiatragul over 1 year ago

#243 - Logo

Pull Request - State: closed - Opened by rdinnager almost 2 years ago

#242 - Merge pull request #241 from danlwarren/master

Pull Request - State: closed - Opened by danlwarren almost 2 years ago

#241 - Merging changes back into v2-develop

Pull Request - State: closed - Opened by danlwarren almost 2 years ago

#240 - When I build species objects, I keep getting a Warning message: [buffer] empty SpatVector

Issue - State: closed - Opened by Songxingjiang almost 2 years ago

#239 - Checking breadth and overlap from ASCII files produced by maxent

Issue - State: closed - Opened by kmechan almost 2 years ago - 3 comments

#238 - fix SpatRaster error for maxent. fixes #235

Pull Request - State: closed - Opened by rdinnager almost 2 years ago - 2 comments

#237 - Update Readme.md

Pull Request - State: closed - Opened by stiatragul almost 2 years ago - 1 comment

#236 - Species 1 does not have a species.name set!

Issue - State: closed - Opened by Elcaballerodelasflores almost 2 years ago

#235 - SpatRaster error in enmtools.maxent()

Issue - State: closed - Opened by ascanioalfredoa almost 2 years ago - 12 comments

#234 - added basic backwards compatibility with check.points() and check.ras…

Pull Request - State: closed - Opened by rdinnager almost 2 years ago - 1 comment

#233 - complete refactor of the extra packages system.

Pull Request - State: closed - Opened by rdinnager almost 2 years ago - 2 comments

#232 - CSV file problem?

Issue - State: closed - Opened by jacolmen almost 2 years ago - 1 comment

#231 - This should fix occasional failures in modelling functions due to the..

Pull Request - State: closed - Opened by rdinnager almost 2 years ago

#230 - How to plot my overlap

Issue - State: open - Opened by Oliveira-D-R almost 2 years ago - 2 comments

#229 - Consider using modEVA package for model fit

Issue - State: open - Opened by danlwarren about 2 years ago
Labels: Enhancement, ENMTools 2.0

#229 - Consider using modEVA package for model fit

Issue - State: open - Opened by danlwarren about 2 years ago
Labels: Enhancement, ENMTools 2.0

#228 - Getting rid of deprecated dependencies

Issue - State: closed - Opened by danlwarren about 2 years ago - 2 comments

#227 - ENMtools not on CRAN

Issue - State: closed - Opened by plantarum about 2 years ago - 2 comments

#227 - ENMtools not on CRAN

Issue - State: closed - Opened by plantarum about 2 years ago - 2 comments

#226 - `background.buffer()` gives uninformative error when it produces no points

Issue - State: closed - Opened by rdinnager about 2 years ago - 1 comment

#226 - `background.buffer()` gives uninformative error when it produces no points

Issue - State: closed - Opened by rdinnager about 2 years ago - 1 comment

#225 - documentation for raster.breadth

Issue - State: closed - Opened by plantarum over 2 years ago - 1 comment

#225 - documentation for raster.breadth

Issue - State: closed - Opened by plantarum over 2 years ago - 1 comment

#224 - Add `ppmlasso` methods back in

Issue - State: open - Opened by rdinnager over 2 years ago
Labels: Enhancement

#224 - Add `ppmlasso` methods back in

Issue - State: open - Opened by rdinnager over 2 years ago
Labels: Enhancement

#223 - combine.species not working when there is no range raster in species objects

Issue - State: closed - Opened by danlwarren over 2 years ago - 1 comment

#223 - combine.species not working when there is no range raster in species objects

Issue - State: closed - Opened by danlwarren over 2 years ago - 1 comment

#222 - enmtools.vip not working for poly() in GLM

Issue - State: closed - Opened by danlwarren over 2 years ago - 1 comment

#222 - enmtools.vip not working for poly() in GLM

Issue - State: closed - Opened by danlwarren over 2 years ago - 1 comment

#221 - documentation for geog.range.overlap

Issue - State: closed - Opened by plantarum almost 3 years ago - 1 comment

#221 - documentation for geog.range.overlap

Issue - State: closed - Opened by plantarum almost 3 years ago - 1 comment

#220 - Make rts-style tests work when test.prop = 0

Issue - State: closed - Opened by danlwarren almost 3 years ago

#220 - Make rts-style tests work when test.prop = 0

Issue - State: closed - Opened by danlwarren almost 3 years ago

#219 - Background.buffer can't accept raster stacks for a mask

Issue - State: closed - Opened by danlwarren almost 3 years ago - 2 comments

#219 - Background.buffer can't accept raster stacks for a mask

Issue - State: closed - Opened by danlwarren almost 3 years ago - 2 comments

#218 - background.buffer needs to be exported in NAMESPACE

Issue - State: closed - Opened by plantarum almost 3 years ago - 1 comment

#218 - background.buffer needs to be exported in NAMESPACE

Issue - State: closed - Opened by plantarum almost 3 years ago - 1 comment

#217 - 1.0.6

Pull Request - State: closed - Opened by danlwarren almost 3 years ago

#217 - 1.0.6

Pull Request - State: closed - Opened by danlwarren almost 3 years ago

#216 - Adapt to new spatstat.random package.

Pull Request - State: closed - Opened by rubak about 3 years ago

#216 - Adapt to new spatstat.random package.

Pull Request - State: closed - Opened by rubak about 3 years ago

#215 - Adapt to new spatstat.random package.

Pull Request - State: closed - Opened by rubak about 3 years ago - 2 comments

#215 - Adapt to new spatstat.random package.

Pull Request - State: closed - Opened by rubak about 3 years ago - 2 comments

#214 - Add ... for modeling functions to enmtools.aoc

Issue - State: closed - Opened by danlwarren about 3 years ago - 1 comment

#214 - Add ... for modeling functions to enmtools.aoc

Issue - State: closed - Opened by danlwarren about 3 years ago - 1 comment

#213 - Updates to deal with ecospat.boyce changes

Issue - State: closed - Opened by danlwarren about 3 years ago

#213 - Updates to deal with ecospat.boyce changes

Issue - State: closed - Opened by danlwarren about 3 years ago

#212 - Add option for maxent models to use cloglog and other score types

Issue - State: open - Opened by danlwarren about 3 years ago - 1 comment

#212 - Add option for maxent models to use cloglog and other score types

Issue - State: open - Opened by danlwarren about 3 years ago - 1 comment

#211 - Fixed typo where my name got cut off of the paper citation :P

Pull Request - State: closed - Opened by rdinnager over 3 years ago

#211 - Fixed typo where my name got cut off of the paper citation :P

Pull Request - State: closed - Opened by rdinnager over 3 years ago

#210 - Setting use of MaxEnt model in the identity.test function

Issue - State: closed - Opened by FernandoMoroC over 3 years ago - 3 comments