Ecosyste.ms: Issues

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GitHub / danbider/lightning-pose issues and pull requests

#193 - Discrepancy in images names across CSV files

Issue - State: open - Opened by TiernonRR 3 months ago - 2 comments

#191 - Converting Sleap data to Lightning Pose format

Issue - State: open - Opened by Freddie-Faulich 4 months ago - 1 comment
Labels: question

#190 - Running on Mac OS

Issue - State: open - Opened by ytsimon2004 4 months ago - 1 comment
Labels: question

#189 - Issue with checkpoint

Issue - State: closed - Opened by AarushShintre 4 months ago - 4 comments

#188 - Error about varying image sizes in fully supervised model training

Issue - State: closed - Opened by hummuscience 4 months ago - 2 comments

#187 - support for multiple data streams

Pull Request - State: closed - Opened by themattinthehatt 4 months ago

#186 - Streamlit for multiple-camera view

Issue - State: open - Opened by YitingChang 5 months ago - 2 comments
Labels: enhancement

#185 - axios error: network error?

Issue - State: closed - Opened by Chrysovalantis000 5 months ago - 2 comments

#184 - implement pca object that handles NaNs

Pull Request - State: closed - Opened by themattinthehatt 5 months ago

#183 - over confident pseudo tracking when animal exits field of view

Issue - State: open - Opened by DavidGill159 5 months ago - 3 comments

#182 - Out of memory error with Multi-camera context network.

Issue - State: closed - Opened by DavidGill159 5 months ago - 5 comments

#181 - remove augmentations for val/test data

Pull Request - State: closed - Opened by themattinthehatt 5 months ago

#180 - Passing vfr_check to fn.readers.video

Pull Request - State: closed - Opened by hummuscience 5 months ago

#179 - Fix for variable frame rate (vfr) videos

Pull Request - State: closed - Opened by hummuscience 5 months ago - 4 comments

#178 - Fail to make videos after running inference

Issue - State: closed - Opened by YitingChang 5 months ago - 4 comments

#176 - snapshot during training

Issue - State: closed - Opened by Wulin-Tan 5 months ago - 11 comments
Labels: enhancement

#175 - plot losses against epochs

Issue - State: closed - Opened by Wulin-Tan 5 months ago - 4 comments
Labels: documentation, question

#174 - how to speed up prediction

Issue - State: closed - Opened by Wulin-Tan 5 months ago - 5 comments
Labels: question

#173 - ModuleNotFound: hydra

Issue - State: closed - Opened by themattinthehatt 6 months ago - 2 comments

#172 - GPU memory on training and prediction

Issue - State: closed - Opened by Wulin-Tan 6 months ago - 9 comments
Labels: question

#171 - how to understand and set epsilon?

Issue - State: closed - Opened by Wulin-Tan 6 months ago - 1 comment

#170 - How to select resize_dim?

Issue - State: closed - Opened by Wulin-Tan 6 months ago - 2 comments
Labels: question

#169 - cannot fit PCA with 0 samples < 40 observation dimensions

Issue - State: closed - Opened by marybethcassity 6 months ago - 3 comments
Labels: question

#168 - add sleap2lp file

Pull Request - State: closed - Opened by Shmuel-columbia 6 months ago

#167 - [fix] streamlit video page bugfix

Pull Request - State: closed - Opened by themattinthehatt 6 months ago

#166 - Poor Training Results on Hand Tracking Dataset Despite Using Various Backbones and Loss Functions

Issue - State: closed - Opened by JamilHanouneh 6 months ago - 11 comments
Labels: enhancement

#165 - Mask and indexed tensor shapes do not match.

Issue - State: closed - Opened by marybethcassity 6 months ago - 4 comments

#164 - match num_workers with batch size

Issue - State: closed - Opened by Wulin-Tan 6 months ago - 3 comments
Labels: question

#163 - add new unit test fixture

Pull Request - State: closed - Opened by themattinthehatt 6 months ago

#162 - misc updates to docs and tests

Pull Request - State: closed - Opened by themattinthehatt 6 months ago

#161 - training batch size and dali loading batch size mismatch

Issue - State: closed - Opened by Wulin-Tan 6 months ago - 6 comments

#160 - No converter sleap from LP

Issue - State: closed - Opened by Shmuel-columbia 6 months ago
Labels: enhancement

#159 - Issue with installing

Issue - State: closed - Opened by sonjablumenstock 6 months ago - 5 comments

#158 - Would it be possible to use a pretrained model (such as Topview Mouse from DLC animal zoo)?

Issue - State: open - Opened by hummuscience 6 months ago - 39 comments
Labels: enhancement, app

#157 - ignore hidden "_labeled" folders in dlc to lp conversion

Pull Request - State: closed - Opened by hummuscience 6 months ago - 1 comment

#156 - can lightning pose predict images?

Issue - State: closed - Opened by Wulin-Tan 6 months ago - 8 comments
Labels: enhancement

#155 - Pose-app crushed at the last moment of training.

Issue - State: closed - Opened by penguinflux 7 months ago - 4 comments
Labels: bug

#154 - generalize keypoint access from dataframes in metrics

Pull Request - State: closed - Opened by themattinthehatt 7 months ago

#153 - Update installation.rst

Pull Request - State: closed - Opened by DavidGill159 7 months ago - 1 comment

#152 - issue with lightning pose installation

Issue - State: closed - Opened by Chrysovalantis000 7 months ago - 3 comments
Labels: app

#151 - [docs] avi vs mp4 faq

Pull Request - State: closed - Opened by themattinthehatt 7 months ago

#150 - support for avi formats

Issue - State: closed - Opened by Wei21st 7 months ago - 2 comments
Labels: documentation, question

#149 - v1.3.0 updates

Pull Request - State: closed - Opened by themattinthehatt 7 months ago

#148 - Set different temporal loss parameters for each body parts

Issue - State: closed - Opened by Wei21st 7 months ago - 2 comments

#147 - [docs] update config file info

Pull Request - State: closed - Opened by themattinthehatt 8 months ago

#146 - Compatible with Windows?

Issue - State: closed - Opened by DavidGill159 8 months ago - 22 comments
Labels: documentation, question

#144 - any manual refining and re-training function in lightning pose?

Issue - State: closed - Opened by Wulin-Tan 8 months ago - 1 comment

#143 - Starts training from specific checkpoint

Issue - State: closed - Opened by NgD-Huy 8 months ago - 3 comments

#142 - How many labeled frames should we have?

Issue - State: closed - Opened by Wulin-Tan 8 months ago - 3 comments

#141 - how to understand unlabeled frames vs temporal context frames?

Issue - State: closed - Opened by Wulin-Tan 8 months ago - 3 comments

#140 - how to set up min_epochs and max_epochs

Issue - State: closed - Opened by Wulin-Tan 8 months ago - 5 comments

#139 - error in prediction

Issue - State: closed - Opened by Wulin-Tan 8 months ago - 2 comments

#138 - how to carry out multi-GPU with lightning-pose?

Issue - State: open - Opened by Wulin-Tan 8 months ago - 2 comments
Labels: enhancement

#137 - FAQ dropdown menus

Pull Request - State: closed - Opened by themattinthehatt 8 months ago

#136 - multiple csv files

Issue - State: closed - Opened by Wulin-Tan 8 months ago - 2 comments

#135 - [bug] fix vit checkpoint loading (closes #134)

Pull Request - State: closed - Opened by themattinthehatt 8 months ago

#134 - Error loading checkpoint for vit_b_sam backbone

Issue - State: closed - Opened by themattinthehatt 8 months ago
Labels: bug

#133 - Query regarding use of Filtered_predictions in LightningPose model

Issue - State: closed - Opened by ReetKaur15 8 months ago - 1 comment

#132 - TypeError: entry_points() got an unexpected keyword argument 'group'

Issue - State: closed - Opened by arielah 8 months ago - 9 comments

#131 - scripts/predict_new_vids.py should save loss metrics as csv

Issue - State: closed - Opened by EugenioBertolini 9 months ago - 6 comments
Labels: enhancement, good first issue

#130 - running lighting-pose on CalMS21 dataset

Issue - State: closed - Opened by egg-benedict 9 months ago - 4 comments
Labels: question

#129 - pytest errors for semi-supervised models

Issue - State: closed - Opened by themattinthehatt 9 months ago - 1 comment

#128 - docs + config cleanup

Pull Request - State: closed - Opened by themattinthehatt 10 months ago - 1 comment

#126 - Multiview

Pull Request - State: closed - Opened by farzad-ziaie 10 months ago

#124 - Stuck on Model Building Cell

Issue - State: closed - Opened by wddwxq 11 months ago - 5 comments
Labels: bug

#123 - Trying to add custom-trained YOLOv8n-pose model

Issue - State: closed - Opened by Tarislada 12 months ago - 5 comments
Labels: bug, enhancement

#122 - readthedocs

Pull Request - State: closed - Opened by themattinthehatt 12 months ago

#121 - bug fix for multi-view metric computation

Pull Request - State: closed - Opened by themattinthehatt about 1 year ago

#120 - Feature: add support for multiple (non-fused) camera views

Issue - State: closed - Opened by themattinthehatt about 1 year ago - 36 comments
Labels: enhancement

#118 - update documentation

Pull Request - State: closed - Opened by themattinthehatt about 1 year ago

#117 - update code to use original image and video pixel coordinates for all predictions

Pull Request - State: closed - Opened by Selmaan about 1 year ago - 1 comment

#116 - While running the lightning pose , it ends up with "Killed"

Issue - State: closed - Opened by ReetKaur15 about 1 year ago

#115 - Multi view

Pull Request - State: closed - Opened by farzad-ziaie about 1 year ago

#114 - Multiview

Pull Request - State: closed - Opened by farzad-ziaie about 1 year ago

#113 - MultiviewHeatmapDataset class

Pull Request - State: closed - Opened by farzad-ziaie about 1 year ago - 1 comment

#112 - remove unused linear context model functionality

Pull Request - State: closed - Opened by themattinthehatt about 1 year ago

#111 - unit tests for utils/scripts

Pull Request - State: closed - Opened by themattinthehatt over 1 year ago

#110 - video prediction updates that closes #108, closes #109

Pull Request - State: closed - Opened by themattinthehatt over 1 year ago

#109 - shift of xy coordinates on the labeled_videos

Issue - State: closed - Opened by Di-Wang-AIND over 1 year ago - 7 comments

#108 - fail to generate heatmaps for the video

Issue - State: closed - Opened by Di-Wang-AIND over 1 year ago - 1 comment

#107 - lit-pose crashes while using .avis

Issue - State: closed - Opened by jackransomlovell over 1 year ago - 3 comments

#106 - Feature/vit

Pull Request - State: closed - Opened by ankitvishnu23 over 1 year ago

#105 - remove frozen requirements

Pull Request - State: closed - Opened by themattinthehatt over 1 year ago

#104 - Colab demo No module named 'segment_anything' / Toy config missing

Issue - State: closed - Opened by Antorithms over 1 year ago - 2 comments

#103 - Question on multi-agent pose

Issue - State: closed - Opened by jpoberhauser over 1 year ago - 2 comments
Labels: question

#102 - linting + docs

Pull Request - State: closed - Opened by themattinthehatt over 1 year ago

#101 - Issue: Runtime error database disk image is malformed

Issue - State: closed - Opened by MichaelGMoore over 1 year ago - 3 comments

#100 - [WIP] add folder for active loop experiment

Pull Request - State: open - Opened by ekellbuch over 1 year ago

#98 - updated documentation

Pull Request - State: closed - Opened by themattinthehatt over 1 year ago

#97 - remove unused parts of code

Pull Request - State: closed - Opened by themattinthehatt over 1 year ago

#96 - Uniform heatmaps

Pull Request - State: closed - Opened by ankitvishnu23 over 1 year ago - 2 comments

#95 - closes #93

Pull Request - State: closed - Opened by themattinthehatt over 1 year ago - 1 comment

#94 - GPU memory requirements

Issue - State: closed - Opened by MichaelGMoore over 1 year ago - 14 comments

#93 - Move backbone model initialization to backbones.py

Issue - State: closed - Opened by luca-medeiros over 1 year ago