Ecosyste.ms: Issues

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GitHub / daler/trackhub issues and pull requests

#60 - V1.0rc

Pull Request - State: closed - Opened by daler 7 months ago

#59 - Update params 2024

Pull Request - State: closed - Opened by daler 8 months ago

#58 - Support URL for 2bit files

Issue - State: open - Opened by evajason about 2 years ago

#57 - example hubs don't go to a good location

Issue - State: open - Opened by daler about 2 years ago

#56 - Broken link in Quickstart docs

Issue - State: open - Opened by evajason about 2 years ago

#56 - Broken link in Quickstart docs

Issue - State: open - Opened by evajason about 2 years ago

#55 - Fix tests

Pull Request - State: closed - Opened by daler about 2 years ago

#55 - Fix tests

Pull Request - State: closed - Opened by daler about 2 years ago

#54 - Command-line interface for package

Pull Request - State: closed - Opened by evajason about 2 years ago

#53 - Universal Track Hub Script

Pull Request - State: closed - Opened by evajason over 2 years ago

#53 - Universal Track Hub Script

Pull Request - State: closed - Opened by evajason over 2 years ago

#52 - example

Pull Request - State: closed - Opened by daler about 3 years ago

#51 - update changelog

Pull Request - State: closed - Opened by daler over 3 years ago

#51 - update changelog

Pull Request - State: closed - Opened by daler over 3 years ago

#50 - supplement to add tracks work

Pull Request - State: closed - Opened by daler over 3 years ago

#50 - supplement to add tracks work

Pull Request - State: closed - Opened by daler over 3 years ago

#49 - Uniform method for adding tracks to containers

Pull Request - State: closed - Opened by evajason over 3 years ago

#48 - fix #20

Pull Request - State: closed - Opened by daler almost 4 years ago

#48 - fix #20

Pull Request - State: closed - Opened by daler almost 4 years ago

#47 - Inconsistent method names for adding tracks

Issue - State: closed - Opened by evajason almost 4 years ago - 3 comments

#47 - Inconsistent method names for adding tracks

Issue - State: closed - Opened by evajason almost 4 years ago - 3 comments

#46 - Edit docs

Pull Request - State: closed - Opened by evajason almost 4 years ago

#46 - Edit docs

Pull Request - State: closed - Opened by evajason almost 4 years ago

#45 - documentation and test touch-ups

Pull Request - State: closed - Opened by daler almost 4 years ago

#45 - documentation and test touch-ups

Pull Request - State: closed - Opened by daler almost 4 years ago

#44 - Fix indentation, rm track_type_override

Pull Request - State: closed - Opened by daler almost 4 years ago

#44 - Fix indentation, rm track_type_override

Pull Request - State: closed - Opened by daler almost 4 years ago

#43 - Indendation fix

Pull Request - State: closed - Opened by daler almost 4 years ago

#43 - Indendation fix

Pull Request - State: closed - Opened by daler almost 4 years ago

#42 - Add example hubs

Pull Request - State: closed - Opened by evajason almost 4 years ago

#42 - Add example hubs

Pull Request - State: closed - Opened by evajason almost 4 years ago

#41 - reconfigure testing

Pull Request - State: closed - Opened by daler about 4 years ago

#41 - reconfigure testing

Pull Request - State: closed - Opened by daler about 4 years ago

#40 - run parse.py and merge diffs to parsed_params.py

Pull Request - State: closed - Opened by daler about 4 years ago

#40 - run parse.py and merge diffs to parsed_params.py

Pull Request - State: closed - Opened by daler about 4 years ago

#39 - allow autoScale group

Pull Request - State: closed - Opened by daler about 4 years ago - 2 comments

#39 - allow autoScale group

Pull Request - State: closed - Opened by daler about 4 years ago - 2 comments

#38 - support arbitrary kwargs for Genome objects (including defaultPos)

Pull Request - State: closed - Opened by daler about 4 years ago

#38 - support arbitrary kwargs for Genome objects (including defaultPos)

Pull Request - State: closed - Opened by daler about 4 years ago

#37 - allow autoScale group

Pull Request - State: closed - Opened by siebrenf about 4 years ago

#37 - allow autoScale group

Pull Request - State: closed - Opened by siebrenf about 4 years ago

#35 - ssh_askpass error

Issue - State: closed - Opened by msubirana about 5 years ago - 1 comment

#35 - ssh_askpass error

Issue - State: closed - Opened by msubirana about 5 years ago - 1 comment

#34 - bigWig file names

Issue - State: closed - Opened by DoaneAS over 6 years ago - 3 comments

#34 - bigWig file names

Issue - State: closed - Opened by DoaneAS over 6 years ago - 3 comments

#33 - Params overhaul

Pull Request - State: closed - Opened by daler almost 7 years ago - 4 comments

#33 - Params overhaul

Pull Request - State: closed - Opened by daler almost 7 years ago - 4 comments

#32 - py2 support

Pull Request - State: closed - Opened by daler almost 7 years ago

#31 - ImportError: cannot import name Hub

Issue - State: closed - Opened by endrebak almost 7 years ago - 7 comments

#30 - refactor filenames and rendering

Pull Request - State: closed - Opened by daler about 7 years ago

#29 - ci overhaul

Pull Request - State: closed - Opened by daler about 7 years ago

#28 - Adding functionality for parent on/off

Pull Request - State: closed - Opened by kapka2 over 7 years ago - 5 comments

#27 - Track parent on/off

Issue - State: closed - Opened by kapka2 over 7 years ago - 2 comments

#26 - improved python3 support

Pull Request - State: closed - Opened by daler over 7 years ago

#25 - Python3

Pull Request - State: closed - Opened by detrout almost 8 years ago - 2 comments

#24 - Avoid accessing g._html if it doesn't exist

Pull Request - State: closed - Opened by detrout almost 8 years ago

#23 - Unittest

Pull Request - State: closed - Opened by detrout almost 8 years ago

#22 - Add exonNumbers parameter

Pull Request - State: closed - Opened by detrout almost 8 years ago

#21 - ViewTrack url not mapped to bigDataUrl

Issue - State: closed - Opened by mmendez12 almost 8 years ago - 2 comments

#20 - priority must be float not integer

Issue - State: closed - Opened by liz-is about 8 years ago - 2 comments

#19 - Added AssemblyHub example

Pull Request - State: closed - Opened by mgperry over 8 years ago - 1 comment

#18 - Added support for AssemblyHubs

Pull Request - State: closed - Opened by mgperry over 8 years ago - 1 comment

#17 - `pip install` error

Issue - State: closed - Opened by mlovci almost 9 years ago - 4 comments

#16 - symlink to staging area before uploading

Issue - State: closed - Opened by daler almost 10 years ago - 1 comment

#15 - assembly hub support

Issue - State: closed - Opened by daler almost 10 years ago - 1 comment

#14 - fixed issue with relative path to trackdb file

Pull Request - State: closed - Opened by jgoldmann almost 10 years ago - 4 comments

#13 - Trackhub S3 Integration

Pull Request - State: open - Opened by gpratt over 10 years ago - 1 comment

#12 - Add MANIFEST.in so ez_setup.py is included and package can be installed from PyPI

Pull Request - State: closed - Opened by lrowe over 10 years ago - 1 comment

#11 - how to setup and run

Issue - State: closed - Opened by ghost over 11 years ago - 1 comment

#10 - Type bigWig limit support

Pull Request - State: closed - Opened by vsmalladi about 12 years ago

#9 - parse UCSC's settings

Issue - State: closed - Opened by daler about 12 years ago - 6 comments

#8 - mutiWig Tracks

Pull Request - State: closed - Opened by vsmalladi about 12 years ago

#7 - Settings (constants.py)

Pull Request - State: closed - Opened by vsmalladi about 12 years ago - 5 comments

#6 - example data

Issue - State: closed - Opened by daler about 12 years ago - 8 comments

#5 - support for multiWig tracks

Issue - State: closed - Opened by daler about 12 years ago

#4 - test scripts

Issue - State: closed - Opened by daler about 12 years ago - 1 comment

#3 - vcfTabix

Pull Request - State: closed - Opened by vsmalladi about 12 years ago - 1 comment

#2 - SuperTracks

Pull Request - State: closed - Opened by vsmalladi about 12 years ago - 3 comments

#1 - Add support for superTracks

Issue - State: closed - Opened by vsmalladi about 12 years ago - 1 comment