Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / cubed-dev/cubed issues and pull requests

#587 - Fix for flaky straggler test

Pull Request - State: closed - Opened by tomwhite 4 months ago
Labels: bug

#586 - Use `general_blockwise` in case of chunk-aligned selections in `index`

Pull Request - State: closed - Opened by tomwhite 4 months ago
Labels: array api, optimization

#585 - Zarr v3 now requires at least Python 3.11

Pull Request - State: closed - Opened by tomwhite 4 months ago

#583 - Add new 2023.12 elemwise functions

Pull Request - State: closed - Opened by tomwhite 4 months ago
Labels: array api

#582 - Fix outer result dtype

Pull Request - State: closed - Opened by tomwhite 4 months ago
Labels: bug, array api

#581 - Expose the `linalg` namespace and include in status page

Pull Request - State: closed - Opened by tomwhite 4 months ago
Labels: documentation, array api

#580 - Debug failing straggler test

Pull Request - State: closed - Opened by tomwhite 4 months ago
Labels: bug

#579 - Are there docs for how to set up array-api-tests?

Issue - State: open - Opened by alxmrs 4 months ago - 2 comments

#578 - Handle more memray allocation types

Pull Request - State: closed - Opened by tomwhite 5 months ago

#577 - QR decomposition

Pull Request - State: closed - Opened by tomwhite 5 months ago
Labels: array api

#576 - Drop Python 3.9

Pull Request - State: closed - Opened by tomwhite 5 months ago

#575 - Implement `unstack` using multiple outputs

Pull Request - State: closed - Opened by tomwhite 5 months ago
Labels: array api

#574 - Tensorstore compression fix

Pull Request - State: closed - Opened by tomwhite 5 months ago
Labels: bug

#573 - Set object codec for object arrays

Pull Request - State: closed - Opened by tomwhite 5 months ago

#572 - Allow Zarr compression to be set for intermediate files

Pull Request - State: closed - Opened by tomwhite 5 months ago

#571 - Fix Rich progress bar flickering by limiting refreshes

Pull Request - State: closed - Opened by tomwhite 5 months ago

#570 - Cubed vs dask.array: Convergent evolution?

Issue - State: open - Opened by TomNicholas 5 months ago - 1 comment

#569 - Fail during planning if map_blocks drop_axis is for a chunked dimension

Pull Request - State: closed - Opened by tomwhite 5 months ago
Labels: core

#568 - Check projected memory does not exceed allowed when finalizing plan

Issue - State: open - Opened by tomwhite 5 months ago - 2 comments
Labels: memory, optimization, planning

#567 - Align tqdm progress bars

Pull Request - State: closed - Opened by tomwhite 5 months ago - 1 comment

#566 - Coerce args to `map_blocks` to arrays

Pull Request - State: closed - Opened by tomwhite 5 months ago

#565 - Rewrite "why cubed?" for users

Issue - State: closed - Opened by TomNicholas 5 months ago - 2 comments
Labels: documentation

#564 - Materialize arrays optimizer bugfix

Pull Request - State: closed - Opened by tomwhite 5 months ago
Labels: bug, optimization

#563 - Introduce FinalizedPlan

Pull Request - State: closed - Opened by tomwhite 5 months ago
Labels: optimization

#562 - Fix Array API Tests

Pull Request - State: closed - Opened by tomwhite 5 months ago

#561 - Memray callback

Pull Request - State: closed - Opened by tomwhite 5 months ago
Labels: memory

#560 - Add chunkmem to VirtualFullArray, which was missed in #447

Pull Request - State: closed - Opened by tomwhite 5 months ago

#559 - Fix bug where `newaxis` with full slices doesn't add new axes

Pull Request - State: closed - Opened by tomwhite 5 months ago
Labels: bug

#558 - Memray integration

Pull Request - State: closed - Opened by tomwhite 5 months ago - 1 comment
Labels: documentation, memory

#557 - Relieve users of cluster management on HPC?

Issue - State: open - Opened by TomNicholas 6 months ago
Labels: runtime

#556 - Bug where array that is being computed is optimized away

Pull Request - State: closed - Opened by tomwhite 6 months ago
Labels: bug, optimization

#555 - Example using "dragon" start method

Pull Request - State: open - Opened by applio 6 months ago - 2 comments
Labels: runtime

#554 - Support use of multiprocessing start methods other than "spawn" (e.g. "dragon")

Pull Request - State: closed - Opened by applio 6 months ago - 4 comments

#553 - Support Xarray Datasets and DataArrays in `cubed.visualize`

Issue - State: closed - Opened by tomwhite 6 months ago - 3 comments
Labels: xarray-integration

#552 - Groupby Shuffle primitive

Issue - State: open - Opened by TomNicholas 6 months ago
Labels: xarray-integration

#551 - Cast inputs to Cubed arrays in `apply_ufunc`

Pull Request - State: closed - Opened by tomwhite 6 months ago

#550 - More lenient dtype support

Pull Request - State: closed - Opened by tomwhite 6 months ago
Labels: array api, xarray-integration

#549 - Flaky test: test_stragglers

Issue - State: closed - Opened by tomwhite 6 months ago

#548 - Adds logging [INFO] to `TimelineVisualizationCallback` and `HistoryCallback`

Pull Request - State: closed - Opened by norlandrhagen 6 months ago - 9 comments

#547 - Skip fewer array API tests

Pull Request - State: closed - Opened by tomwhite 6 months ago
Labels: array api

#546 - Rechunk where dict has missing axes

Pull Request - State: closed - Opened by tomwhite 6 months ago

#545 - Add `raise_if_computes` for testing

Pull Request - State: closed - Opened by tomwhite 6 months ago - 3 comments
Labels: xarray-integration

#544 - `TimelineVisualizationCallback()` usage [cubed - cubed/xarray]

Issue - State: closed - Opened by norlandrhagen 6 months ago - 2 comments

#543 - `HistoryCallback()` in .compute [cubed / cubed-xarray]

Issue - State: closed - Opened by norlandrhagen 6 months ago - 5 comments

#542 - Release 0.16.0

Issue - State: closed - Opened by tomwhite 6 months ago - 1 comment

#541 - Add a progress bar context manager

Issue - State: open - Opened by tomwhite 6 months ago
Labels: enhancement

#540 - Diagnostics documentation

Pull Request - State: closed - Opened by tomwhite 6 months ago
Labels: documentation

#539 - Basic rechunking example

Issue - State: closed - Opened by norlandrhagen 6 months ago - 9 comments
Labels: bug, xarray-integration

#538 - [Docs] Usage instructions for progressbars

Issue - State: closed - Opened by norlandrhagen 6 months ago - 2 comments
Labels: documentation

#537 - Turning on JAX tests for all PRs.

Pull Request - State: closed - Opened by alxmrs 6 months ago

#536 - Adding `compile_function` as execute option.

Pull Request - State: closed - Opened by alxmrs 6 months ago - 2 comments

#535 - Configuration documentation

Pull Request - State: closed - Opened by tomwhite 6 months ago
Labels: documentation

#534 - Improve set-up instructions for examples

Pull Request - State: closed - Opened by tomwhite 6 months ago

#533 - Deprecate `cubed.extensions` and move to `cubed.diagnostics`

Pull Request - State: closed - Opened by tomwhite 6 months ago

#532 - Add better test for local paths in `delete_on_exit`

Pull Request - State: closed - Opened by tomwhite 6 months ago

#531 - Add scan.

Pull Request - State: open - Opened by dcherian 6 months ago

#530 - Update CUBED_CONFIG path in example README.md

Pull Request - State: closed - Opened by thodson-usgs 6 months ago

#529 - Switch `concatenate2` to `concatenate3`

Issue - State: closed - Opened by dcherian 6 months ago - 2 comments

#528 - Implement `flip`

Pull Request - State: closed - Opened by tomwhite 6 months ago

#527 - Tree merge chunks

Pull Request - State: closed - Opened by tomwhite 6 months ago - 2 comments
Labels: core

#526 - Rename `cubed.extensions` to `cubed.diagnostics`

Issue - State: closed - Opened by tomwhite 6 months ago

#525 - Update demo notebooks

Pull Request - State: closed - Opened by tomwhite 6 months ago

#524 - Delete local context directories on exit

Pull Request - State: closed - Opened by tomwhite 6 months ago

#523 - Zarr Python v3 updates

Pull Request - State: closed - Opened by tomwhite 6 months ago

#522 - Modal progress fix

Pull Request - State: closed - Opened by tomwhite 6 months ago

#521 - InvalidEntrypoint Error in M1 Silicon

Issue - State: closed - Opened by GitHubDiom 6 months ago - 4 comments

#520 - WIP: Add virtual-rechunk example

Pull Request - State: open - Opened by thodson-usgs 6 months ago - 20 comments
Labels: bug, xarray-integration, upstream

#519 - Example of map_blocks/apply_gufunc

Issue - State: open - Opened by tomwhite 6 months ago - 1 comment
Labels: examples

#518 - Optional autodiff support?

Issue - State: open - Opened by alxmrs 6 months ago - 4 comments

#517 - Check `allowed_mem` does not exceed total on machine for `processes` executor

Pull Request - State: closed - Opened by tomwhite 6 months ago - 1 comment

#516 - Warn if peak mem exceeds `allowed_mem`

Pull Request - State: closed - Opened by tomwhite 6 months ago

#515 - Remove `max_tasks_per_child=1` limitation from processes executor

Pull Request - State: closed - Opened by tomwhite 6 months ago
Labels: runtime, single-machine

#514 - Single machine tracking issue

Issue - State: open - Opened by tomwhite 6 months ago
Labels: runtime, single-machine

#513 - Zarr compression settings for local intermediate files

Issue - State: open - Opened by tomwhite 6 months ago - 1 comment
Labels: zarr, storage, single-machine

#512 - Automatically delete intermediate files on local filesystems

Issue - State: closed - Opened by tomwhite 6 months ago
Labels: storage, single-machine

#511 - Test Cubed using free-threaded Python

Issue - State: open - Opened by tomwhite 6 months ago
Labels: runtime, single-machine

#510 - Check `allowed_mem` does not exceed total on machine for local executors

Issue - State: closed - Opened by tomwhite 6 months ago
Labels: runtime, single-machine

#509 - Consider adopting a stateless PRNG API

Issue - State: open - Opened by alxmrs 6 months ago - 3 comments

#508 - Adding Jax tests for the M1 mac.

Pull Request - State: open - Opened by alxmrs 7 months ago - 15 comments

#507 - Document how to run examples on local machine using `processes`

Pull Request - State: closed - Opened by tomwhite 7 months ago
Labels: documentation

#506 - Remove print for local executors

Pull Request - State: closed - Opened by tomwhite 7 months ago

#505 - Document how to run examples on local machine

Issue - State: closed - Opened by tomwhite 7 months ago
Labels: documentation

#504 - Document how to configure Cubed using a configuration file

Issue - State: closed - Opened by tomwhite 7 months ago
Labels: documentation

#503 - Run tests on Python 3.13

Pull Request - State: closed - Opened by tomwhite 7 months ago - 1 comment

#502 - In-memory rechunk

Issue - State: open - Opened by TomNicholas 7 months ago - 6 comments
Labels: enhancement, memory, optimization, storage

#501 - document what needs to be installed to run climatology anomaly example

Pull Request - State: closed - Opened by rbavery 7 months ago
Labels: documentation, examples

#500 - Not obvious what packages need to be installed to run Cubed examples

Issue - State: closed - Opened by rbavery 7 months ago - 4 comments

#499 - Executor for Apache Spark

Issue - State: open - Opened by rbavery 7 months ago - 3 comments
Labels: runtime

#498 - Docs on how to write a new executor

Issue - State: open - Opened by TomNicholas 7 months ago - 1 comment
Labels: documentation, runtime

#497 - Manually manage the GIL with Cython

Issue - State: open - Opened by alxmrs 7 months ago - 3 comments

#496 - Wietze/test examples broken

Pull Request - State: closed - Opened by wietzesuijker 7 months ago - 1 comment

#495 - Fix: set allowed_mem above insufficient default

Pull Request - State: closed - Opened by wietzesuijker 7 months ago - 3 comments

#492 - Cubed for larger-than-memory workloads on a single machine

Issue - State: open - Opened by TomNicholas 7 months ago - 12 comments
Labels: enhancement, runtime, single-machine

#491 - Fail with NotImplementedError if backend Zarr is missing nchunks_initialized

Pull Request - State: closed - Opened by tomwhite 7 months ago
Labels: zarr

#490 - Is there a parallel between tile GPU/TPU kernes and Cubed chunks?

Issue - State: open - Opened by alxmrs 7 months ago - 7 comments

#489 - Update slides - June 2024

Pull Request - State: closed - Opened by tomwhite 7 months ago - 1 comment
Labels: documentation

#488 - Ray Executor

Issue - State: open - Opened by alxmrs 7 months ago - 5 comments
Labels: runtime