Ecosyste.ms: Issues
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GitHub / crazyhottommy/scclusteval issues and pull requests
#20 - Subsamples some times have more clusters than Full dataset.
Issue -
State: open - Opened by Xuyuch 9 months ago
#19 - What if I want to get more cluster for a specific cluster resulted in using scclusteval
Issue -
State: closed - Opened by pariaaliour about 2 years ago
- 3 comments
#18 - no optimum combination of parameter
Issue -
State: closed - Opened by pariaaliour over 2 years ago
- 3 comments
#17 - Should I do ScaleData on my integrated data as an input for scclusteval
Issue -
State: closed - Opened by pariaaliour over 2 years ago
- 3 comments
#16 - How do I use SCTransform+harmony integrated dataset for scclusteval cluster evaluation
Issue -
State: closed - Opened by pariaaliour over 2 years ago
- 1 comment
#15 - UMAP parameter to get reasonable clusters layout
Issue -
State: closed - Opened by MarcusLCC about 3 years ago
- 5 comments
#15 - UMAP parameter to get reasonable clusters layout
Issue -
State: closed - Opened by MarcusLCC about 3 years ago
- 5 comments
#14 - Cluster number differences between Seurat and scclusteval with selected parameter combination
Issue -
State: closed - Opened by Jay-Leung about 3 years ago
- 1 comment
#13 - Why the number of clusters is different in JaccardRainCloudPlot vs Umap plot with the selected combination of parameters
Issue -
State: closed - Opened by pariaaliour over 3 years ago
- 4 comments
#12 - Subsetting data on combined Seurat with Harmony embeddings
Issue -
State: closed - Opened by Jay-Leung over 3 years ago
- 2 comments
#11 - Seurat v4 Updates
Pull Request -
State: closed - Opened by skvanburen almost 4 years ago
- 1 comment
#10 - Error No SeuratObject
Issue -
State: closed - Opened by mthimma almost 4 years ago
- 1 comment
#9 - invalid filename argument???
Issue -
State: closed - Opened by levinhein about 4 years ago
- 1 comment
#8 - Run scClusterBoot on Seurat object processed through SCTransform workflow
Issue -
State: closed - Opened by lucygarner over 4 years ago
- 2 comments
#7 - memory error with silhouette_score
Issue -
State: closed - Opened by chelun86 over 4 years ago
- 3 comments
#6 - Error while using the CalculateSilhouette() function
Issue -
State: closed - Opened by aditisk over 4 years ago
- 6 comments
#5 - How to find stable subclusters?
Issue -
State: closed - Opened by hummuscience over 4 years ago
- 3 comments
#4 - Installation error on Mac OS catalina (10.15.2)
Issue -
State: closed - Opened by Eomesodermin over 4 years ago
- 2 comments
#3 - Preallocate results matrix for pairwise jaccard distances.
Pull Request -
State: closed - Opened by jdblischak almost 5 years ago
- 1 comment
#2 - add Silouette width visualization for each cluster
Issue -
State: closed - Opened by crazyhottommy about 6 years ago
Labels: enhancement
#1 - visualization by specifying clusters
Issue -
State: closed - Opened by crazyhottommy about 6 years ago
Labels: enhancement