Ecosyste.ms: Issues

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GitHub / crazyhottommy/scclusteval issues and pull requests

#18 - no optimum combination of parameter

Issue - State: closed - Opened by pariaaliour over 2 years ago - 3 comments

#17 - Should I do ScaleData on my integrated data as an input for scclusteval

Issue - State: closed - Opened by pariaaliour over 2 years ago - 3 comments

#15 - UMAP parameter to get reasonable clusters layout

Issue - State: closed - Opened by MarcusLCC about 3 years ago - 5 comments

#15 - UMAP parameter to get reasonable clusters layout

Issue - State: closed - Opened by MarcusLCC about 3 years ago - 5 comments

#12 - Subsetting data on combined Seurat with Harmony embeddings

Issue - State: closed - Opened by Jay-Leung over 3 years ago - 2 comments

#11 - Seurat v4 Updates

Pull Request - State: closed - Opened by skvanburen almost 4 years ago - 1 comment

#10 - Error No SeuratObject

Issue - State: closed - Opened by mthimma almost 4 years ago - 1 comment

#9 - invalid filename argument???

Issue - State: closed - Opened by levinhein about 4 years ago - 1 comment

#8 - Run scClusterBoot on Seurat object processed through SCTransform workflow

Issue - State: closed - Opened by lucygarner over 4 years ago - 2 comments

#7 - memory error with silhouette_score

Issue - State: closed - Opened by chelun86 over 4 years ago - 3 comments

#6 - Error while using the CalculateSilhouette() function

Issue - State: closed - Opened by aditisk over 4 years ago - 6 comments

#5 - How to find stable subclusters?

Issue - State: closed - Opened by hummuscience over 4 years ago - 3 comments

#4 - Installation error on Mac OS catalina (10.15.2)

Issue - State: closed - Opened by Eomesodermin over 4 years ago - 2 comments

#3 - Preallocate results matrix for pairwise jaccard distances.

Pull Request - State: closed - Opened by jdblischak almost 5 years ago - 1 comment

#2 - add Silouette width visualization for each cluster

Issue - State: closed - Opened by crazyhottommy about 6 years ago
Labels: enhancement

#1 - visualization by specifying clusters

Issue - State: closed - Opened by crazyhottommy about 6 years ago
Labels: enhancement