Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / constantinpape/torch-em issues and pull requests
#485 - Add time stamp for saved model checkpoints
Issue -
State: open - Opened by anwai98 7 days ago
- 1 comment
#484 - Update docs
Pull Request -
State: closed - Opened by anwai98 11 days ago
#483 - Minor updates to LM datasets
Pull Request -
State: closed - Opened by anwai98 11 days ago
#482 - Add XPRESS dataset
Issue -
State: open - Opened by anwai98 14 days ago
- 1 comment
#481 - Bump version to 0.7.6
Pull Request -
State: closed - Opened by constantinpape 15 days ago
#480 - Spot for open-source microscopy images
Issue -
State: open - Opened by anwai98 16 days ago
#479 - Minor update to expose padding mode and make resize flexible
Pull Request -
State: closed - Opened by anwai98 23 days ago
- 1 comment
#478 - Minor fix to argument positions in MitoEM dataset
Pull Request -
State: closed - Opened by anwai98 27 days ago
#477 - Fix return type for BUSI data paths
Pull Request -
State: closed - Opened by anwai98 about 1 month ago
#476 - Minor update medical imaging datasets for consistency
Pull Request -
State: closed - Opened by anwai98 about 1 month ago
- 1 comment
#475 - Minor fix to NuClick dataset arguments
Pull Request -
State: closed - Opened by titusgriebel about 1 month ago
- 1 comment
#474 - Add GlaS dataset
Pull Request -
State: closed - Opened by anwai98 about 1 month ago
- 1 comment
#473 - GlaS dataset added
Pull Request -
State: closed - Opened by titusgriebel about 1 month ago
#472 - Add custom splits for CryoNuSeg dataset
Pull Request -
State: closed - Opened by anwai98 about 1 month ago
- 1 comment
#471 - on-the-fly split creation for cryonuseg
Pull Request -
State: closed - Opened by titusgriebel about 1 month ago
#470 - Minor update to OSIC PulmoFib preprocessing scripts
Pull Request -
State: closed - Opened by anwai98 about 1 month ago
#469 - Add KiTS dataset
Pull Request -
State: closed - Opened by anwai98 about 1 month ago
- 1 comment
#468 - Minor update to inform about creating custom data splits
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
#467 - Update environment files and github workflows
Pull Request -
State: closed - Opened by constantinpape about 2 months ago
- 1 comment
#466 - Finalize the documentation and some refactoring
Issue -
State: open - Opened by constantinpape about 2 months ago
#465 - Add download functionality support for `synapse` hosted datasets
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
#464 - Add docstring to other functionalities
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
#464 - Add docstring to other functionalities
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
#463 - Complete doc strings
Pull Request -
State: closed - Opened by constantinpape about 2 months ago
- 1 comment
#462 - Add BetaSeg dataset
Issue -
State: open - Opened by anwai98 about 2 months ago
#461 - Fix typo in LIVECell dataset
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
#461 - Fix typo in LIVECell dataset
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
#460 - Minor update to three-channel logic in tissuenet
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
- 1 comment
#460 - Minor update to three-channel logic in tissuenet
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
- 1 comment
#459 - Minor refactor to LM datasets
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
- 1 comment
#458 - Cosmetic changes
Pull Request -
State: closed - Opened by constantinpape about 2 months ago
#457 - Add resize inputs for JSRT data
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
#456 - Add splits for PENGWIN dataset
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
- 1 comment
#455 - Add data splits for PSFHS dataset
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
- 1 comment
#455 - Add data splits for PSFHS dataset
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
- 1 comment
#454 - Add data splits for motum dataset
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
- 1 comment
#454 - Add data splits for motum dataset
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
- 1 comment
#453 - Add data splits to papila dataset
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
- 1 comment
#453 - Add data splits to papila dataset
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
- 1 comment
#452 - Add Mice TumSeg data
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
- 1 comment
#451 - Add AMD-SD dataset
Pull Request -
State: closed - Opened by anwai98 about 2 months ago
- 1 comment
#450 - Misc improvements
Pull Request -
State: closed - Opened by constantinpape 2 months ago
#449 - Remove minor debugging artifact in CPM dataset
Pull Request -
State: closed - Opened by anwai98 2 months ago
#448 - Document distributed data training / add example
Issue -
State: closed - Opened by constantinpape 2 months ago
- 1 comment
#447 - Automate downloads from Synapse database
Issue -
State: closed - Opened by anwai98 2 months ago
#446 - Add CVZ Fluo dataset
Pull Request -
State: closed - Opened by anwai98 2 months ago
#445 - Add support for resizing inputs to patch shape
Pull Request -
State: closed - Opened by anwai98 2 months ago
#444 - Ad explicit splits for histopathology datasets
Pull Request -
State: closed - Opened by anwai98 2 months ago
- 1 comment
#443 - puma csv split done (tested), cpm and jano in progress
Pull Request -
State: closed - Opened by titusgriebel 2 months ago
#442 - Add DeepSeas dataset
Pull Request -
State: closed - Opened by anwai98 2 months ago
#441 - Add YeaZ dataset
Pull Request -
State: closed - Opened by anwai98 2 months ago
#440 - Add BriFiSeg dataset
Pull Request -
State: closed - Opened by anwai98 2 months ago
- 1 comment
#439 - Minor fix to removing alpha channel in TNBC data
Pull Request -
State: closed - Opened by anwai98 2 months ago
#438 - Update documentation
Pull Request -
State: closed - Opened by anwai98 2 months ago
- 2 comments
#437 - Minor fix to check for zipfile in CPM dataset
Pull Request -
State: closed - Opened by anwai98 2 months ago
#436 - Add full set of DSB dataset
Pull Request -
State: closed - Opened by anwai98 2 months ago
#435 - Add CellBinDB dataset
Pull Request -
State: closed - Opened by anwai98 2 months ago
#434 - Make splits for lizard dataset
Pull Request -
State: closed - Opened by anwai98 2 months ago
#433 - Lizard
Pull Request -
State: closed - Opened by titusgriebel 2 months ago
#432 - Add CryoVesNet dataset
Issue -
State: open - Opened by constantinpape 2 months ago
#431 - Minor fix to filtering mismatching image-label pairs
Pull Request -
State: closed - Opened by anwai98 2 months ago
#430 - Minor fix to PUMA dataset
Pull Request -
State: closed - Opened by anwai98 2 months ago
#429 - Minor fix to preprocessing MoNuSaC
Pull Request -
State: closed - Opened by anwai98 2 months ago
#428 - Add NuClick dataset
Pull Request -
State: closed - Opened by anwai98 2 months ago
#427 - Add argument to get expected image-label pairs for CBIS DDSM data
Pull Request -
State: closed - Opened by anwai98 3 months ago
#426 - Ignore inputs with empty labels for SIIM ACR dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
#425 - Remove other irrelevant labels for LEG 3D US dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
#424 - Minor fix to OIMHS dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
#423 - Bump to 0.7.5
Pull Request -
State: closed - Opened by constantinpape 3 months ago
#422 - Add Vision Transformer from ScaleMAE
Pull Request -
State: open - Opened by anwai98 3 months ago
#422 - Add Vision Transformer from ScaleMAE
Pull Request -
State: open - Opened by anwai98 3 months ago
#421 - Wrap SAMed2D dataset to h5 format per sub-dataset
Issue -
State: open - Opened by anwai98 3 months ago
#421 - Wrap SAMed2D dataset to h5 format per sub-dataset
Issue -
State: open - Opened by anwai98 3 months ago
#420 - Add brain organoids dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
#419 - Minor update to cryonuseg dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
- 1 comment
#418 - exchanged napari progress with tqdm
Pull Request -
State: closed - Opened by lufre1 3 months ago
#417 - Add CoNSeP dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
- 9 comments
#416 - Add CPM dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
#415 - Add Janowczyk dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
#414 - Add NuInsSeg dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
#413 - Add PUMA dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
- 1 comment
#412 - Add SegPC dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
#411 - Add support to avoid overwriting trained models
Pull Request -
State: closed - Opened by anwai98 3 months ago
- 2 comments
#410 - Add BlastoSPIM dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
#410 - Add BlastoSPIM dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
#409 - Add notebook for tiling window-based prediction
Pull Request -
State: closed - Opened by anwai98 3 months ago
- 1 comment
#408 - Add TOIAM dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
#408 - Add TOIAM dataset
Pull Request -
State: closed - Opened by anwai98 3 months ago
#407 - Add notebook for segmentation workflows
Issue -
State: closed - Opened by anwai98 3 months ago
- 1 comment
#406 - Refactor medical imaging datasets for experiments
Pull Request -
State: closed - Opened by anwai98 4 months ago
- 1 comment
#406 - Refactor medical imaging datasets for experiments
Pull Request -
State: closed - Opened by anwai98 4 months ago
- 1 comment
#405 - Add CadAIver dataset
Pull Request -
State: closed - Opened by anwai98 4 months ago
#405 - Add CadAIver dataset
Pull Request -
State: closed - Opened by anwai98 4 months ago
#404 - Add MOTUM dataset
Pull Request -
State: closed - Opened by anwai98 4 months ago
#404 - Add MOTUM dataset
Pull Request -
State: closed - Opened by anwai98 4 months ago
#403 - Add PSFHS dataset
Pull Request -
State: closed - Opened by anwai98 4 months ago
#403 - Add PSFHS dataset
Pull Request -
State: closed - Opened by anwai98 4 months ago
#402 - Add PALM dataset
Pull Request -
State: closed - Opened by anwai98 4 months ago
#402 - Add PALM dataset
Pull Request -
State: closed - Opened by anwai98 4 months ago
#401 - Update vision mamba backbone to latest updates
Pull Request -
State: closed - Opened by anwai98 4 months ago
- 1 comment