constantinpape/pybdv issues and pull requests

#51 - add file path to error message

Pull Request - State: closed - Opened by martinschorb over 1 year ago - 1 comment

#51 - add file path to error message

Pull Request - State: closed - Opened by martinschorb over 1 year ago - 1 comment

#50 - rename function with typo

Pull Request - State: closed - Opened by martinschorb over 1 year ago - 1 comment

#50 - rename function with typo

Pull Request - State: closed - Opened by martinschorb over 1 year ago - 1 comment

#49 - Add support for new hdf5 dtype handling

Pull Request - State: open - Opened by constantinpape almost 2 years ago

#49 - Add support for new hdf5 dtype handling

Pull Request - State: open - Opened by constantinpape almost 2 years ago

#48 - Interpolation mode failed in the newest version?

Issue - State: open - Opened by maximka48 over 2 years ago

#48 - Interpolation mode failed in the newest version?

Issue - State: open - Opened by maximka48 over 2 years ago

#47 - file not found error in abspath

Issue - State: closed - Opened by martinschorb over 2 years ago - 2 comments

#47 - file not found error in abspath

Issue - State: closed - Opened by martinschorb over 2 years ago - 2 comments

#46 - Add more options to dask array

Pull Request - State: closed - Opened by boazmohar almost 3 years ago - 5 comments

#46 - Add more options to dask array

Pull Request - State: closed - Opened by boazmohar almost 3 years ago - 5 comments

#45 - metadata - auto-fill scales from N5 attributes

Pull Request - State: open - Opened by martinschorb almost 3 years ago - 1 comment

#45 - metadata - auto-fill scales from N5 attributes

Pull Request - State: open - Opened by martinschorb almost 3 years ago - 1 comment

#44 - Cleanup dask

Pull Request - State: closed - Opened by constantinpape about 3 years ago - 1 comment

#44 - Cleanup dask

Pull Request - State: closed - Opened by constantinpape about 3 years ago - 1 comment

#43 - [WIP] Adding Dask array compatability

Pull Request - State: closed - Opened by boazmohar about 3 years ago - 6 comments

#43 - [WIP] Adding Dask array compatability

Pull Request - State: closed - Opened by boazmohar about 3 years ago - 6 comments

#42 - Feature request: working with dask arrays

Issue - State: closed - Opened by boazmohar about 3 years ago - 5 comments

#42 - Feature request: working with dask arrays

Issue - State: closed - Opened by boazmohar about 3 years ago - 5 comments

#41 - Updating version on conda

Issue - State: closed - Opened by K-Meech about 3 years ago - 3 comments

#41 - Updating version on conda

Issue - State: closed - Opened by K-Meech about 3 years ago - 3 comments

#40 - on the fly example 3D, multi channels, multi timepoints

Issue - State: open - Opened by romainGuiet about 3 years ago - 1 comment

#40 - on the fly example 3D, multi channels, multi timepoints

Issue - State: open - Opened by romainGuiet about 3 years ago - 1 comment

#39 - On the fly editing much slower for n5 than hdf5

Issue - State: closed - Opened by K-Meech over 3 years ago - 2 comments

#39 - On the fly editing much slower for n5 than hdf5

Issue - State: closed - Opened by K-Meech over 3 years ago - 2 comments

#38 - chunk boundaries visible as black cubes

Issue - State: closed - Opened by martinschorb over 3 years ago - 7 comments

#38 - chunk boundaries visible as black cubes

Issue - State: closed - Opened by martinschorb over 3 years ago - 7 comments

#37 - generate N5 fails

Issue - State: closed - Opened by martinschorb over 3 years ago - 2 comments

#37 - generate N5 fails

Issue - State: closed - Opened by martinschorb over 3 years ago - 2 comments

#36 - Zarr support

Pull Request - State: closed - Opened by constantinpape almost 4 years ago

#36 - Zarr support

Pull Request - State: closed - Opened by constantinpape almost 4 years ago

#35 - TIF conversion fails due to missing extension in directory path

Issue - State: closed - Opened by martinschorb almost 4 years ago - 13 comments

#35 - TIF conversion fails due to missing extension in directory path

Issue - State: closed - Opened by martinschorb almost 4 years ago - 13 comments

#34 - make_bdv fails upon certain dataset size

Issue - State: closed - Opened by jhennies about 4 years ago - 2 comments

#34 - make_bdv fails upon certain dataset size

Issue - State: closed - Opened by jhennies about 4 years ago - 2 comments

#33 - Halo computation in downsample function does not work correctly

Issue - State: open - Opened by constantinpape about 4 years ago - 3 comments

#33 - Halo computation in downsample function does not work correctly

Issue - State: open - Opened by constantinpape about 4 years ago - 3 comments

#32 - Scales by make_bdv seem to 'move' the data

Issue - State: closed - Opened by jhennies about 4 years ago - 5 comments

#32 - Scales by make_bdv seem to 'move' the data

Issue - State: closed - Opened by jhennies about 4 years ago - 5 comments

#31 - Implement downsample in memory

Pull Request - State: closed - Opened by constantinpape about 4 years ago - 2 comments

#31 - Implement downsample in memory

Pull Request - State: closed - Opened by constantinpape about 4 years ago - 2 comments

#30 - Bdv dataset

Pull Request - State: closed - Opened by jhennies about 4 years ago - 20 comments

#30 - Bdv dataset

Pull Request - State: closed - Opened by jhennies about 4 years ago - 20 comments

#29 - pybdv crashes when I import

Issue - State: closed - Opened by Sh4zKh4n about 4 years ago - 1 comment

#29 - pybdv crashes when I import

Issue - State: closed - Opened by Sh4zKh4n about 4 years ago - 1 comment

#28 - edit mode and group mode kill each other

Issue - State: closed - Opened by martinschorb over 4 years ago - 3 comments

#28 - edit mode and group mode kill each other

Issue - State: closed - Opened by martinschorb over 4 years ago - 3 comments

#27 - memmaps while modifying metadata only

Issue - State: closed - Opened by martinschorb over 4 years ago - 2 comments

#26 - #viewsetups >100

Issue - State: closed - Opened by martinschorb over 4 years ago - 10 comments

#25 - Downsampling if already present

Issue - State: closed - Opened by martinschorb over 4 years ago - 2 comments

#24 - attributes no longer supported

Issue - State: closed - Opened by martinschorb over 4 years ago - 4 comments

#23 - dealing with absolute paths

Issue - State: open - Opened by martinschorb over 4 years ago - 4 comments

#22 - anisotropic voxel sizes

Issue - State: closed - Opened by martinschorb over 4 years ago - 4 comments

#21 - big volumes chunking

Issue - State: open - Opened by martinschorb over 4 years ago - 4 comments

#20 - adding 2D data to hdf5 container

Issue - State: open - Opened by martinschorb over 4 years ago - 13 comments

#19 - Extra check for displaysettings attribute

Issue - State: open - Opened by constantinpape over 4 years ago - 1 comment

#18 - minor: h5 conversion progress bar wrong maximum

Issue - State: closed - Opened by martinschorb over 4 years ago - 3 comments

#17 - hdf5 conversion fails

Issue - State: closed - Opened by martinschorb over 4 years ago - 6 comments

#16 - 2D input data

Issue - State: open - Opened by martinschorb over 4 years ago - 10 comments

#15 - Add support for dict attributes

Pull Request - State: closed - Opened by constantinpape over 4 years ago

#14 - Add update_metadata convenience function

Issue - State: open - Opened by constantinpape over 4 years ago - 10 comments

#13 - Implement attributes

Pull Request - State: closed - Opened by constantinpape over 4 years ago

#12 - Update tests

Pull Request - State: closed - Opened by constantinpape over 4 years ago

#11 - Support view attributes

Issue - State: closed - Opened by constantinpape over 4 years ago - 32 comments

#10 - Add support for time-point

Pull Request - State: closed - Opened by constantinpape over 4 years ago

#9 - data padding

Issue - State: closed - Opened by martinschorb almost 5 years ago - 2 comments

#8 - Warn when signed data with negative values is given (hdf5 only)

Issue - State: open - Opened by constantinpape almost 5 years ago

#7 - Dtypes

Pull Request - State: closed - Opened by constantinpape about 5 years ago

#6 - Proper support and check for unsigned types

Issue - State: closed - Opened by constantinpape about 5 years ago

#5 - Document downscaling parameters

Issue - State: closed - Opened by constantinpape about 5 years ago - 1 comment

#4 - Support 2d

Issue - State: closed - Opened by constantinpape about 5 years ago - 2 comments

#3 - WIP: Fix set-up id

Pull Request - State: closed - Opened by constantinpape over 5 years ago

#2 - Support multiple time-points

Issue - State: closed - Opened by constantinpape over 5 years ago - 2 comments

#1 - Automatically increase set-up id

Issue - State: closed - Opened by constantinpape over 5 years ago

GitHub / constantinpape/pybdv issues and pull requests