Ecosyste.ms: Issues
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GitHub / computproteomics/proteomaker issues and pull requests
#18 - set up phospho-specific enrichment
Issue -
State: open - Opened by mlocardpaulet 29 days ago
- 1 comment
#17 - report expected (ground truth) quantities instead of `Regulation_Amplitude` and `Regulation_Pattern`
Issue -
State: open - Opened by mlocardpaulet about 1 month ago
#16 - Simple shiny app for creating data
Issue -
State: open - Opened by veitveit 4 months ago
#15 - Add option to run_sims to rerun simulation entirely overwriting previous runs
Issue -
State: closed - Opened by veitveit 4 months ago
- 1 comment
#14 - Negative values in `AfterMSRun$Enriched`
Issue -
State: closed - Opened by mlocardpaulet 5 months ago
- 18 comments
#13 - Add new parameter to remove proteins
Issue -
State: closed - Opened by veitveit 5 months ago
- 5 comments
#12 - peptides removed even if value is set to "0" or "1" (all in or all out)
Issue -
State: closed - Opened by mlocardpaulet 6 months ago
- 1 comment
#11 - two names for the digestion output: "outputDigest_" and "outputDigestion_"
Issue -
State: closed - Opened by mlocardpaulet 6 months ago
- 1 comment
#10 - parameter description
Issue -
State: closed - Opened by mlocardpaulet 6 months ago
- 8 comments
#9 - package error
Issue -
State: closed - Opened by mlocardpaulet 6 months ago
- 3 comments
#8 - Request: get previous parameters
Issue -
State: closed - Opened by mlocardpaulet 6 months ago
- 2 comments
#7 - Switch to discard statistical testing
Issue -
State: closed - Opened by veitveit 6 months ago
- 1 comment
#6 - print all parameters when running def_param()
Issue -
State: closed - Opened by mlocardpaulet 6 months ago
- 1 comment
#5 - modifyable residues parameter
Issue -
State: closed - Opened by mlocardpaulet 6 months ago
- 3 comments
#4 - parameter `FracModPerProt`
Issue -
State: closed - Opened by mlocardpaulet 6 months ago
- 1 comment
#3 - notes regarding installation (not a real issue)
Issue -
State: closed - Opened by mlocardpaulet 6 months ago
- 2 comments
#2 - Update README.md - fix typo
Pull Request -
State: closed - Opened by mlocardpaulet 6 months ago
#1 - Move detectability calculation to digestion to avoid overhead
Issue -
State: closed - Opened by veitveit 6 months ago
- 11 comments