computational-ms/pyiohat issues and pull requests

#58 - Update regex requirement from <2023.13.0,>=2022.7.25 to >=2022.7.25,<2024.6.0

Pull Request - State: open - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#57 - Update regex requirement from <2023.13.0,>=2022.7.25 to >=2022.7.25,<2024.5.0

Pull Request - State: closed - Opened by dependabot[bot] 3 months ago - 1 comment
Labels: dependencies

#56 - Sequence mapping is not tested

Issue - State: open - Opened by fu 3 months ago

#55 - Update pyahocorasick requirement from <2.1.0,>=1.4.4 to >=1.4.4,<2.2.0

Pull Request - State: open - Opened by dependabot[bot] 4 months ago
Labels: dependencies

#54 - add setuptools to cd

Pull Request - State: closed - Opened by tristan-ranff 5 months ago

#53 - relax tqdm requirements

Pull Request - State: closed - Opened by tristan-ranff 5 months ago

#52 - Update pandas requirement from <2.2.0,>=1.4.3 to >=1.4.3,<2.3.0

Pull Request - State: closed - Opened by dependabot[bot] 6 months ago
Labels: dependencies

#51 - Update regex requirement from <2023.11.0,>=2022.7.25 to >=2022.7.25,<2023.13.0

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago
Labels: dependencies

#50 - Update regex requirement from <2023.9.0,>=2022.7.25 to >=2022.7.25,<2023.11.0

Pull Request - State: closed - Opened by dependabot[bot] 9 months ago
Labels: dependencies

#49 - Update tqdm requirement from <4.66,>=4.64 to >=4.64,<4.67

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies

#48 - Update pandas requirement from <2.1.0,>=1.4.3 to >=1.4.3,<2.2.0

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago - 1 comment
Labels: dependencies

#47 - Update regex requirement from <2023.7.0,>=2022.7.25 to >=2022.7.25,<2023.9.0

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies

#46 - Fix/mp context

Pull Request - State: closed - Opened by valentin-petzold 10 months ago

#45 - Update ident_base_parser.py

Pull Request - State: closed - Opened by fu 10 months ago

#44 - New handling of modifications

Pull Request - State: closed - Opened by StSchulze about 1 year ago

#43 - Update regex requirement from <2023.4.0,>=2022.7.25 to >=2022.7.25,<2023.7.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies

#42 - Update regex requirement from <2023.4.0,>=2022.7.25 to >=2022.7.25,<2023.6.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies

#41 - fix ident_reference bug in FlashLFQ parser

Pull Request - State: closed - Opened by MKoesters over 1 year ago

#40 - Update loguru requirement from ~=0.6.0 to >=0.6,<0.8

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#39 - Update pandas requirement from <1.6.0,>=1.4.3 to >=1.4.3,<2.1.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#38 - Update regex requirement from <2022.11.0,>=2022.7.25 to >=2022.7.25,<2023.4.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#37 - Add TMTQUant parser and fix flashLFQ

Pull Request - State: closed - Opened by MKoesters over 1 year ago

#36 - Update uparma requirement from ~=0.9.15 to >=0.9.15,<1.1.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#35 - change usage of 'file' column in metadata file for 'lineage_root'

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#34 - Feature/break tests

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#33 - Update tqdm requirement from ~=4.64.0 to >=4.64,<4.66

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#32 - update readme, keep docs

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#31 - update readme, keep docs

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#30 - Feature/add docs on release

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#29 - Fix/rename to pyiohat

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#28 - Fix/remove deprecated examples

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#27 - new black

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#26 - Bump sphinx-rtd-theme from 1.1.1 to 1.2.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#25 - Bump sphinxcontrib-htmlhelp from 2.0.0 to 2.0.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#24 - add to new columns to allow for easier open mod searches

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#23 - Bump sphinxcontrib-applehelp from 1.0.2 to 1.0.4

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#22 - Update pyahocorasick requirement from ~=1.4.4 to >=1.4.4,<2.1.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#21 - Bump sphinxcontrib-applehelp from 1.0.2 to 1.0.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies

#20 - Added missing numpy import

Pull Request - State: closed - Opened by ArtiVlasov over 1 year ago

#19 - Update tox_ci.yml

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#18 - [WIP] add badge to readme

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#17 - Feature/flash lfq unify

Pull Request - State: closed - Opened by MKoesters over 1 year ago

#16 - version 1.8.1

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#15 - Open Discussion

Pull Request - State: closed - Opened by fu over 1 year ago

#14 - Bump sphinx-rtd-theme from 0.5.2 to 1.1.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#13 - Update pandas requirement from ~=1.4.3 to >=1.4.3,<1.6.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#12 - Update regex requirement from ~=2022.7.25 to >=2022.7.25,<2022.11.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies

#11 - improve xml parsing for comet and msgfplus

Pull Request - State: closed - Opened by valentin-petzold over 1 year ago - 1 comment

#10 - Fix/supercharged

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#9 - 1.8.0

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#8 - msfragger fix

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#7 - Improvement/extract models

Pull Request - State: closed - Opened by tristan-ranff over 1 year ago

#6 - Example scripts ain't working

Issue - State: open - Opened by fu almost 2 years ago
Labels: bug

#5 - Remove old Files

Pull Request - State: closed - Opened by fu almost 2 years ago

#4 - Main

Pull Request - State: closed - Opened by fu almost 2 years ago

#3 - Update pypi_cd.yml

Pull Request - State: closed - Opened by MKoesters almost 2 years ago

#2 - Feature/renaming

Pull Request - State: closed - Opened by MKoesters almost 2 years ago

#1 - Update Readme

Pull Request - State: closed - Opened by fu almost 2 years ago

GitHub / computational-ms/pyiohat issues and pull requests