common-workflow-language/cwljava issues and pull requests

#100 - Bump jackson-databind from 2.13.4.1 to 2.13.4.2

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#100 - Bump jackson-databind from 2.13.4.1 to 2.13.4.2

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#99 - Bump jackson-databind from 2.13.4 to 2.13.4.1

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#99 - Bump jackson-databind from 2.13.4 to 2.13.4.1

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#98 - Bump snakeyaml-engine from 2.4 to 2.5

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#98 - Bump snakeyaml-engine from 2.4 to 2.5

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#97 - Bump maven-jar-plugin from 3.2.2 to 3.3.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#97 - Bump maven-jar-plugin from 3.2.2 to 3.3.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#96 - Using this SDK to generate CWL Documents

Issue - State: open - Opened by MyleneSimon over 2 years ago - 5 comments

#96 - Using this SDK to generate CWL Documents

Issue - State: open - Opened by MyleneSimon over 2 years ago - 5 comments

#95 - Bump jackson-dataformat-yaml from 2.13.3 to 2.13.4

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#95 - Bump jackson-dataformat-yaml from 2.13.3 to 2.13.4

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#94 - Bump jackson-databind from 2.13.3 to 2.13.4

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#94 - Bump jackson-databind from 2.13.3 to 2.13.4

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#93 - explore rendering the markdown in the javadocs

Issue - State: open - Opened by mr-c over 2 years ago

#93 - explore rendering the markdown in the javadocs

Issue - State: open - Opened by mr-c over 2 years ago

#92 - Bump snakeyaml-engine from 2.3 to 2.4

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 5 comments
Labels: dependencies, java

#92 - Bump snakeyaml-engine from 2.3 to 2.4

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 5 comments
Labels: dependencies, java

#91 - Bump maven-javadoc-plugin from 3.4.0 to 3.4.1

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#91 - Bump maven-javadoc-plugin from 3.4.0 to 3.4.1

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#90 - Bump maven-deploy-plugin from 2.8.2 to 3.0.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#90 - Bump maven-deploy-plugin from 2.8.2 to 3.0.0

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#89 - refresh with latest schema-salad, proposed CWL v1.2.1 changes

Pull Request - State: closed - Opened by mr-c over 2 years ago - 1 comment

#89 - refresh with latest schema-salad, proposed CWL v1.2.1 changes

Pull Request - State: closed - Opened by mr-c over 2 years ago - 1 comment

#88 - refresh with latest schema-salad, proposed CWL v1.2.1 changes

Pull Request - State: closed - Opened by mr-c over 2 years ago

#88 - refresh with latest schema-salad, proposed CWL v1.2.1 changes

Pull Request - State: closed - Opened by mr-c over 2 years ago

#87 - Bump jackson-databind from 2.13.2.2 to 2.13.3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#87 - Bump jackson-databind from 2.13.2.2 to 2.13.3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#86 - Bump jackson-dataformat-yaml from 2.13.2 to 2.13.3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#86 - Bump jackson-dataformat-yaml from 2.13.2 to 2.13.3

Pull Request - State: closed - Opened by dependabot[bot] over 2 years ago - 1 comment
Labels: dependencies, java

#85 - add shortname funtion with test

Pull Request - State: closed - Opened by mr-c almost 3 years ago

#85 - add shortname funtion with test

Pull Request - State: closed - Opened by mr-c almost 3 years ago

#84 - Bump github/codeql-action from 1 to 2

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, github_actions

#84 - Bump github/codeql-action from 1 to 2

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, github_actions

#83 - Bump maven-javadoc-plugin from 3.3.2 to 3.4.0

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, java

#83 - Bump maven-javadoc-plugin from 3.3.2 to 3.4.0

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, java

#82 - refresh codegen to pick up secfiles DSL fix

Pull Request - State: closed - Opened by mr-c almost 3 years ago - 1 comment

#82 - refresh codegen to pick up secfiles DSL fix

Pull Request - State: closed - Opened by mr-c almost 3 years ago - 1 comment

#81 - secondaryFiles with pattern cannot be parsed when given in workflow inputs

Issue - State: closed - Opened by YuxinShi0423 almost 3 years ago - 4 comments

#81 - secondaryFiles with pattern cannot be parsed when given in workflow inputs

Issue - State: closed - Opened by YuxinShi0423 almost 3 years ago - 4 comments

#80 - Bump jacoco-maven-plugin from 0.8.7 to 0.8.8

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, java

#80 - Bump jacoco-maven-plugin from 0.8.7 to 0.8.8

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, java

#79 - Bump jackson-databind from 2.13.2.1 to 2.13.2.2

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, java

#79 - Bump jackson-databind from 2.13.2.1 to 2.13.2.2

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, java

#78 - [Snyk] Security upgrade com.fasterxml.jackson.core:jackson-databind from 2.13.2 to 2.13.2.1

Pull Request - State: closed - Opened by snyk-bot almost 3 years ago

#78 - [Snyk] Security upgrade com.fasterxml.jackson.core:jackson-databind from 2.13.2 to 2.13.2.1

Pull Request - State: closed - Opened by snyk-bot almost 3 years ago

#77 - Bump maven-compiler-plugin from 3.10.0 to 3.10.1

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, java

#77 - Bump maven-compiler-plugin from 3.10.0 to 3.10.1

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, java

#76 - Bump jackson-dataformat-yaml from 2.13.1 to 2.13.2

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, java

#76 - Bump jackson-dataformat-yaml from 2.13.1 to 2.13.2

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, java

#75 - Bump jackson-databind from 2.13.1 to 2.13.2

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, java

#75 - Bump jackson-databind from 2.13.1 to 2.13.2

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, java

#74 - Bump actions/checkout from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, github_actions

#74 - Bump actions/checkout from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, github_actions

#73 - Bump maven-compiler-plugin from 3.9.0 to 3.10.0

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, java

#73 - Bump maven-compiler-plugin from 3.9.0 to 3.10.0

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago
Labels: dependencies, java

#72 - Bump maven-javadoc-plugin from 3.3.1 to 3.3.2

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago - 2 comments
Labels: dependencies, java

#72 - Bump maven-javadoc-plugin from 3.3.1 to 3.3.2

Pull Request - State: closed - Opened by dependabot[bot] almost 3 years ago - 2 comments
Labels: dependencies, java

#71 - Enum symbols are plain strings

Pull Request - State: closed - Opened by mr-c about 3 years ago - 1 comment

#71 - Enum symbols are plain strings

Pull Request - State: closed - Opened by mr-c about 3 years ago - 1 comment

#70 - Enum types are not parsed correctly

Issue - State: closed - Opened by jdidion about 3 years ago - 6 comments

#70 - Enum types are not parsed correctly

Issue - State: closed - Opened by jdidion about 3 years ago - 6 comments

#69 - Bump maven-compiler-plugin from 3.8.1 to 3.9.0

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago
Labels: dependencies, java

#69 - Bump maven-compiler-plugin from 3.8.1 to 3.9.0

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago
Labels: dependencies, java

#68 - Bump maven-jar-plugin from 3.2.1 to 3.2.2

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago
Labels: dependencies, java

#68 - Bump maven-jar-plugin from 3.2.1 to 3.2.2

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago
Labels: dependencies, java

#67 - Embedded process ID is ignored

Issue - State: closed - Opened by jdidion about 3 years ago - 2 comments

#67 - Embedded process ID is ignored

Issue - State: closed - Opened by jdidion about 3 years ago - 2 comments

#66 - Bump maven-jar-plugin from 3.2.0 to 3.2.1

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago
Labels: dependencies, java

#66 - Bump maven-jar-plugin from 3.2.0 to 3.2.1

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago
Labels: dependencies, java

#65 - Bump jackson-databind from 2.12.6 to 2.13.1

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago
Labels: dependencies, java

#65 - Bump jackson-databind from 2.12.6 to 2.13.1

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago
Labels: dependencies, java

#64 - Bump jackson-dataformat-yaml from 2.10.4 to 2.13.1

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago
Labels: dependencies, java

#64 - Bump jackson-dataformat-yaml from 2.10.4 to 2.13.1

Pull Request - State: closed - Opened by dependabot[bot] about 3 years ago
Labels: dependencies, java

#63 - [Snyk] Fix for 3 vulnerabilities

Pull Request - State: closed - Opened by snyk-bot about 3 years ago

#63 - [Snyk] Fix for 3 vulnerabilities

Pull Request - State: closed - Opened by snyk-bot about 3 years ago

#62 - scope check: chop off the correct end of the fragment

Pull Request - State: closed - Opened by mr-c about 3 years ago - 1 comment

#62 - scope check: chop off the correct end of the fragment

Pull Request - State: closed - Opened by mr-c about 3 years ago - 1 comment

#61 - WorkflowStepInput source IDs incorrect when parsing workflow packed with cwlpack

Issue - State: closed - Opened by jdidion about 3 years ago - 5 comments

#61 - WorkflowStepInput source IDs incorrect when parsing workflow packed with cwlpack

Issue - State: closed - Opened by jdidion about 3 years ago - 5 comments

#60 - Bump maven-compiler-plugin from 3.8.0 to 3.8.1

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies, java

#59 - Bump commons-lang3 from 3.7 to 3.12.0

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies, java

#59 - Bump commons-lang3 from 3.7 to 3.12.0

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies, java

#58 - Bump maven-jar-plugin from 2.4 to 3.2.0

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies, java

#58 - Bump maven-jar-plugin from 2.4 to 3.2.0

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies, java

#57 - Bump snakeyaml-engine from 2.2.1 to 2.3

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies, java

#57 - Bump snakeyaml-engine from 2.2.1 to 2.3

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies, java

#56 - Bump maven-surefire-plugin from 2.21.0 to 2.22.2

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies, java

#56 - Bump maven-surefire-plugin from 2.21.0 to 2.22.2

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies, java

#55 - Bump maven-javadoc-plugin from 3.1.1 to 3.3.1

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies, java

#55 - Bump maven-javadoc-plugin from 3.1.1 to 3.3.1

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies, java

#54 - Bump junit from 4.13.1 to 4.13.2

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies, java

#54 - Bump junit from 4.13.1 to 4.13.2

Pull Request - State: closed - Opened by dependabot[bot] over 3 years ago
Labels: dependencies, java

#53 - Create dependabot.yml

Pull Request - State: closed - Opened by mr-c over 3 years ago

#53 - Create dependabot.yml

Pull Request - State: closed - Opened by mr-c over 3 years ago

#52 - Create codeql-analysis.yml

Pull Request - State: closed - Opened by mr-c over 3 years ago

#52 - Create codeql-analysis.yml

Pull Request - State: closed - Opened by mr-c over 3 years ago

#51 - Add helper to upgrade documents to CWL v1.2

Issue - State: open - Opened by mr-c over 3 years ago
Labels: enhancement, help wanted

#51 - Add helper to upgrade documents to CWL v1.2

Issue - State: open - Opened by mr-c over 3 years ago
Labels: enhancement, help wanted

#50 - Workflow with imported schema is not parsable when packed

Issue - State: closed - Opened by jdidion over 3 years ago - 1 comment

GitHub / common-workflow-language/cwljava issues and pull requests