Ecosyste.ms: Issues

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GitHub / cokelaer/damona issues and pull requests

#39 - mummer should have gnuplot

Issue - State: open - Opened by cokelaer about 2 months ago

#38 - liftoff container

Issue - State: closed - Opened by cokelaer 2 months ago

#37 - Rethink way files are dowloaded/created

Issue - State: open - Opened by cokelaer 4 months ago

#36 - design change

Issue - State: closed - Opened by cokelaer 4 months ago - 1 comment
Labels: enhancement

#34 - add circos in quast image

Issue - State: open - Opened by cokelaer 11 months ago

#32 - Regression in sequana_tools 0.15.1 (deeptools not working)

Issue - State: closed - Opened by cokelaer about 1 year ago - 1 comment
Labels: bug

#31 - Zsh support

Issue - State: closed - Opened by khourhin over 1 year ago - 1 comment

#29 - Fix damona install with specified binaries and minor docs fixes

Pull Request - State: closed - Opened by khourhin over 1 year ago

#29 - Fix damona install with specified binaries and minor docs fixes

Pull Request - State: closed - Opened by khourhin over 1 year ago

#28 - Minor docs fixes

Issue - State: closed - Opened by khourhin over 1 year ago

#28 - Minor docs fixes

Issue - State: closed - Opened by khourhin over 1 year ago

#27 - update graphviz

Pull Request - State: closed - Opened by ddesvillechabrol over 1 year ago

#27 - update graphviz

Pull Request - State: closed - Opened by ddesvillechabrol over 1 year ago

#26 - add medaka and blast registry

Pull Request - State: closed - Opened by ddesvillechabrol over 1 year ago

#26 - add medaka and blast registry

Pull Request - State: closed - Opened by ddesvillechabrol over 1 year ago

#25 - add blast & medaka & prokka & quast

Pull Request - State: closed - Opened by ddesvillechabrol over 1 year ago - 1 comment

#25 - add blast & medaka & prokka & quast

Pull Request - State: closed - Opened by ddesvillechabrol over 1 year ago - 1 comment

#24 - would be nice to have multiple users support in zenodo

Issue - State: open - Opened by cokelaer over 1 year ago - 2 comments

#23 - add minimap2 v2.24.0

Pull Request - State: closed - Opened by ddesvillechabrol over 1 year ago - 1 comment

#23 - add minimap2 v2.24.0

Pull Request - State: closed - Opened by ddesvillechabrol over 1 year ago - 1 comment

#22 - add busco img

Pull Request - State: closed - Opened by ddesvillechabrol over 1 year ago

#22 - add busco img

Pull Request - State: closed - Opened by ddesvillechabrol over 1 year ago

#21 - Fix CI integration

Issue - State: closed - Opened by cokelaer almost 3 years ago
Labels: bug

#21 - Fix CI integration

Issue - State: closed - Opened by cokelaer almost 3 years ago
Labels: bug

#20 - when installing bowtie without version, looks for bowtie2

Issue - State: closed - Opened by cokelaer almost 3 years ago - 1 comment
Labels: bug

#19 - Finalise documentation

Issue - State: closed - Opened by cokelaer almost 3 years ago

#19 - Finalise documentation

Issue - State: closed - Opened by cokelaer almost 3 years ago

#17 - add doi in the registry.

Issue - State: closed - Opened by cokelaer almost 3 years ago

#17 - add doi in the registry.

Issue - State: closed - Opened by cokelaer almost 3 years ago

#16 - implement bash for fish shells

Issue - State: closed - Opened by cokelaer almost 3 years ago

#16 - implement bash for fish shells

Issue - State: closed - Opened by cokelaer almost 3 years ago

#15 - implement the remove command

Issue - State: closed - Opened by cokelaer almost 3 years ago

#15 - implement the remove command

Issue - State: closed - Opened by cokelaer almost 3 years ago

#14 - revisit registry

Issue - State: closed - Opened by cokelaer almost 3 years ago - 1 comment

#14 - revisit registry

Issue - State: closed - Opened by cokelaer almost 3 years ago - 1 comment

#13 - improve the bash script to avoid DAMONA_EXE variable

Issue - State: closed - Opened by cokelaer almost 3 years ago

#13 - improve the bash script to avoid DAMONA_EXE variable

Issue - State: closed - Opened by cokelaer almost 3 years ago

#12 - Validate all current recipe wit new framework

Issue - State: closed - Opened by cokelaer almost 3 years ago

#12 - Validate all current recipe wit new framework

Issue - State: closed - Opened by cokelaer almost 3 years ago

#11 - Check the registry from URL

Issue - State: closed - Opened by cokelaer almost 3 years ago - 1 comment

#11 - Check the registry from URL

Issue - State: closed - Opened by cokelaer almost 3 years ago - 1 comment

#10 - Implement history

Issue - State: closed - Opened by cokelaer almost 3 years ago

#9 - Testing

Pull Request - State: closed - Opened by cokelaer about 3 years ago

#9 - Testing

Pull Request - State: closed - Opened by cokelaer about 3 years ago

#8 - Fixing CI

Pull Request - State: closed - Opened by cokelaer about 3 years ago

#8 - Fixing CI

Pull Request - State: closed - Opened by cokelaer about 3 years ago

#7 - new registry proposal

Issue - State: closed - Opened by cokelaer over 4 years ago - 1 comment

#7 - new registry proposal

Issue - State: closed - Opened by cokelaer over 4 years ago - 1 comment

#6 - new rnaseqc recipe

Issue - State: closed - Opened by cokelaer over 4 years ago
Labels: New recipes

#6 - new rnaseqc recipe

Issue - State: closed - Opened by cokelaer over 4 years ago
Labels: New recipes

#5 - check for existence of singularity executable in the path

Issue - State: closed - Opened by cokelaer over 4 years ago
Labels: enhancement

#5 - check for existence of singularity executable in the path

Issue - State: closed - Opened by cokelaer over 4 years ago
Labels: enhancement

#4 - Implement the activate command

Issue - State: closed - Opened by cokelaer over 4 years ago - 1 comment

#4 - Implement the activate command

Issue - State: closed - Opened by cokelaer over 4 years ago - 1 comment

#3 - Create LICENSE

Pull Request - State: closed - Opened by cokelaer over 4 years ago

#3 - Create LICENSE

Pull Request - State: closed - Opened by cokelaer over 4 years ago

#2 - add command build

Issue - State: closed - Opened by cokelaer over 4 years ago

#2 - add command build

Issue - State: closed - Opened by cokelaer over 4 years ago

#1 - include 'latest' as an option to pull an image

Issue - State: closed - Opened by cokelaer over 4 years ago

#1 - include 'latest' as an option to pull an image

Issue - State: closed - Opened by cokelaer over 4 years ago