Ecosyste.ms: Issues

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GitHub / clbarnes/nblast-rs issues and pull requests

#32 - all-nearest neighbours algorithm

Issue - State: open - Opened by schlegelp 10 months ago - 9 comments

#31 - Zero-copy deserialisation

Issue - State: open - Opened by clbarnes 10 months ago - 1 comment

#30 - Spatial bench

Pull Request - State: closed - Opened by clbarnes 10 months ago - 10 comments

#29 - Improve cache-friendliness of cartesian products

Issue - State: open - Opened by clbarnes over 1 year ago - 1 comment

#28 - Support for multiple non-matching sets

Pull Request - State: closed - Opened by clbarnes over 1 year ago

#27 - Refactor use_alpha to the struct rather than methods

Issue - State: closed - Opened by clbarnes over 1 year ago
Labels: python, javascript, rust

#26 - ResamplingArbor for frontend

Issue - State: open - Opened by clbarnes over 1 year ago
Labels: javascript

#25 - Make friendly JS app

Issue - State: open - Opened by clbarnes over 1 year ago
Labels: javascript

#24 - Pre-filter queries to skip pairs nowhere near each other

Issue - State: closed - Opened by clbarnes about 2 years ago - 1 comment

#23 - Parallelise frontend implementation

Issue - State: open - Opened by clbarnes about 2 years ago
Labels: javascript

#22 - Development branch

Pull Request - State: closed - Opened by clbarnes about 2 years ago

#21 - Use single nearest neighbor method instead of iterator

Pull Request - State: closed - Opened by aschampion over 4 years ago

#20 - Optimisation for large scale NBLAST

Issue - State: open - Opened by jefferis over 4 years ago - 19 comments

#19 - alphas

Issue - State: closed - Opened by clbarnes over 4 years ago - 1 comment

#18 - Function for calculating smat

Issue - State: closed - Opened by clbarnes over 4 years ago

#17 - Method for condensed distance all_v_all

Issue - State: open - Opened by clbarnes over 4 years ago - 1 comment

#16 - Panic in prune_branches_containing via pynblast

Issue - State: closed - Opened by clbarnes over 4 years ago - 1 comment

#15 - py.allow_threads everwhere

Issue - State: closed - Opened by clbarnes over 4 years ago - 1 comment

#14 - Code review

Pull Request - State: closed - Opened by aschampion over 4 years ago - 1 comment

#13 - Use numpy for transferring data in and out of rust types

Issue - State: open - Opened by clbarnes over 4 years ago - 1 comment
Labels: python

#12 - Pruning methods on ResamplingArbor should return self

Issue - State: open - Opened by clbarnes over 4 years ago

#11 - Use stable rust

Issue - State: closed - Opened by clbarnes over 4 years ago

#10 - Parameterise number of neighbours of tangent calculation

Issue - State: closed - Opened by clbarnes over 4 years ago

#9 - Set up CI

Issue - State: closed - Opened by clbarnes over 4 years ago - 1 comment

#8 - Consider query_targets and queries_target

Issue - State: open - Opened by clbarnes over 4 years ago

#7 - Improve symmetric query optimisation

Issue - State: open - Opened by clbarnes over 4 years ago - 1 comment

#6 - Publish on PyPI, readthedocs

Issue - State: open - Opened by clbarnes over 4 years ago - 1 comment
Labels: python

#5 - Add resampling utility

Issue - State: closed - Opened by clbarnes almost 5 years ago - 2 comments

#4 - Convenience function for all-to-all

Issue - State: closed - Opened by clbarnes almost 5 years ago - 1 comment

#3 - Parallelise

Issue - State: closed - Opened by clbarnes almost 5 years ago - 1 comment

#2 - Add switch to do symmetric scoring

Issue - State: closed - Opened by clbarnes almost 5 years ago

#1 - Normalise scores by self-hit of query or target

Issue - State: closed - Opened by clbarnes almost 5 years ago - 1 comment