Ecosyste.ms: Issues

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GitHub / clamsproject/app-swt-detection issues and pull requests

#100 - fix hardcoded 94 min limit on positional encoding

Issue - State: open - Opened by keighrim 5 months ago
Labels: :sparkles:N

#99 - Merging CLI code

Pull Request - State: closed - Opened by marcverhagen 5 months ago

#98 - Merging in CLI code

Pull Request - State: closed - Opened by marcverhagen 5 months ago

#97 - Add CLI capabilities

Issue - State: open - Opened by marcverhagen 5 months ago - 1 comment

#96 - One view or two views?

Issue - State: closed - Opened by marcverhagen 5 months ago - 8 comments

#95 - increase default value for `stopAt` parameter

Issue - State: closed - Opened by owencking 6 months ago - 2 comments

#94 - adding new models after positional encoding fix

Pull Request - State: closed - Opened by keighrim 6 months ago

#93 - release candidate for v4.3

Pull Request - State: closed - Opened by keighrim 6 months ago

#92 - fixed sinusoidal encoding bug

Pull Request - State: closed - Opened by keighrim 6 months ago

#91 - fixes possible disparity in sampling rate and actual sampling

Pull Request - State: closed - Opened by keighrim 6 months ago

#90 - sampled timepoint gaps are vastly off from set frame sample rate

Issue - State: closed - Opened by keighrim 6 months ago
Labels: :bug:B

#89 - decoupling "postbin" and evaluation from training code

Pull Request - State: closed - Opened by keighrim 7 months ago

#88 - TimePoint outputs now include softmax for `NEG` label

Pull Request - State: closed - Opened by keighrim 7 months ago

#87 - app reports no score for "negative" label

Issue - State: closed - Opened by keighrim 7 months ago
Labels: :bug:B

#86 - Optimizing video seek time for still image extraction

Pull Request - State: closed - Opened by keighrim 7 months ago - 2 comments

#85 - startAt and stopAt parameters not honored

Issue - State: closed - Opened by owencking 7 months ago - 1 comment
Labels: :bug:B

#84 - Record all parameter values (including defaults) in output MMIF

Issue - State: closed - Opened by owencking 7 months ago - 2 comments
Labels: :sparkles:N, :v:2

#83 - option to turn OFF stitcher

Pull Request - State: closed - Opened by keighrim 7 months ago

#82 - added logging of computation times

Pull Request - State: closed - Opened by keighrim 7 months ago

#81 - Releasing 4.1

Pull Request - State: closed - Opened by marcverhagen 7 months ago

#80 - App outputs non-exiting MMIF version

Issue - State: closed - Opened by keighrim 7 months ago - 1 comment
Labels: :bug:B

#79 - allowing multiple models via a runtime param

Pull Request - State: closed - Opened by keighrim 7 months ago

#78 - App versions and model versions

Issue - State: open - Opened by marcverhagen 7 months ago - 1 comment

#77 - Hard-coded basic categories

Issue - State: closed - Opened by marcverhagen 7 months ago - 2 comments

#76 - Add a parameter to turn off the stitcher

Issue - State: closed - Opened by marcverhagen 7 months ago

#75 - Releasing 4.0

Pull Request - State: closed - Opened by marcverhagen 7 months ago

#74 - Releasing 4.0

Pull Request - State: closed - Opened by marcverhagen 7 months ago

#72 - Use post binning labels in classification

Issue - State: closed - Opened by marcverhagen 8 months ago - 2 comments

#71 - Add parameter for saving all TimePoints

Issue - State: closed - Opened by marcverhagen 8 months ago - 1 comment
Labels: :sparkles:N

#70 - Sort timeframes and timepoints in output

Issue - State: closed - Opened by marcverhagen 8 months ago

#69 - classifier is very slow

Issue - State: open - Opened by keighrim 8 months ago - 6 comments
Labels: :bug:B

#68 - misspelled property name

Issue - State: closed - Opened by marcverhagen 8 months ago
Labels: :bug:B

#67 - Warnings written to console when running SWT

Issue - State: open - Opened by marcverhagen 8 months ago
Labels: :bug:B

#66 - Releasing v3.0

Pull Request - State: closed - Opened by marcverhagen 8 months ago

#65 - Post-binning stitcher error

Issue - State: closed - Opened by marcverhagen 8 months ago
Labels: :bug:B

#64 - Deal with configurations without pre-binning

Issue - State: closed - Opened by marcverhagen 8 months ago - 1 comment

#63 - Model update for v3

Pull Request - State: closed - Opened by keighrim 8 months ago

#62 - Change the MMIF output using TimePoints and TimeFrames

Issue - State: closed - Opened by marcverhagen 8 months ago - 2 comments
Labels: :v:2

#61 - evaluation of stitcher

Issue - State: closed - Opened by keighrim 8 months ago - 2 comments

#60 - Allow multiple models

Issue - State: open - Opened by marcverhagen 8 months ago - 9 comments
Labels: :arrow_forward:F, :sparkles:N

#59 - Post binning from the app

Issue - State: closed - Opened by marcverhagen 8 months ago - 1 comment
Labels: :arrow_forward:F

#58 - Separate training and evaluation

Issue - State: closed - Opened by marcverhagen 8 months ago
Labels: :arrow_forward:F

#57 - Fixing post binning for the classifier

Pull Request - State: closed - Opened by marcverhagen 8 months ago

#56 - Removing a fatal error in 2.0

Pull Request - State: closed - Opened by marcverhagen 9 months ago - 2 comments

#55 - ConnectionResetError when building the image

Issue - State: closed - Opened by marcverhagen 9 months ago - 3 comments
Labels: :-1:-

#54 - Version 2.0 is broken

Issue - State: closed - Opened by marcverhagen 9 months ago - 1 comment

#53 - New SWT model

Issue - State: closed - Opened by marcverhagen 9 months ago - 1 comment

#52 - Add representative frames

Issue - State: closed - Opened by marcverhagen 9 months ago - 1 comment
Labels: :sparkles:N

#51 - Add parameters to specify a partial segment (start time and end time) of the video

Issue - State: closed - Opened by owencking 9 months ago - 5 comments
Labels: :sparkles:N

#50 - fixed cv2 error when failed to open video file

Pull Request - State: closed - Opened by keighrim 9 months ago

#49 - Zero division error in classify.py

Issue - State: closed - Opened by marcverhagen 9 months ago - 5 comments
Labels: :bug:B

#48 - backbone downloader for container build-time

Pull Request - State: closed - Opened by keighrim 10 months ago

#47 - Issues replicating creation of the model shipped with the code

Issue - State: closed - Opened by marcverhagen 10 months ago - 6 comments

#46 - Classifier app does not know about post binning

Issue - State: closed - Opened by marcverhagen 10 months ago - 6 comments

#45 - Releasing 2.0

Pull Request - State: closed - Opened by marcverhagen 10 months ago - 7 comments

#44 - 14 clamsapp

Pull Request - State: closed - Opened by marcverhagen 10 months ago

#43 - Labels are wrongly associated with scores

Issue - State: closed - Opened by marcverhagen 10 months ago - 4 comments

#42 - the get_configuration() method throws an error

Issue - State: closed - Opened by marcverhagen 10 months ago - 7 comments

#41 - Adding image classifications

Issue - State: closed - Opened by marcverhagen 10 months ago - 9 comments
Labels: :sparkles:N

#40 - Non-determinism in image classification

Issue - State: open - Opened by marcverhagen 10 months ago - 3 comments

#39 - Configurations issues

Issue - State: closed - Opened by marcverhagen 10 months ago - 2 comments

#38 - continued refactoring of feature extractor and classifier

Pull Request - State: closed - Opened by keighrim 10 months ago - 7 comments

#37 - Refactor feat extractor

Pull Request - State: closed - Opened by keighrim 10 months ago

#35 - Adding more config changes

Pull Request - State: closed - Opened by marcverhagen 10 months ago

#34 - adding configuration changes

Pull Request - State: closed - Opened by marcverhagen 10 months ago

#33 - implement smoothing when image label >> timeframe conversion

Issue - State: closed - Opened by keighrim 11 months ago - 4 comments
Labels: :sparkles:N

#32 - refactoring app.py to deduplicate scripts

Pull Request - State: closed - Opened by keighrim 11 months ago - 1 comment

#31 - massive refactoring required

Issue - State: closed - Opened by keighrim 11 months ago - 4 comments

#30 - Detached classifier config

Pull Request - State: closed - Opened by keighrim 11 months ago - 2 comments

#29 - cleaning up readme

Pull Request - State: closed - Opened by keighrim 11 months ago

#28 - update `classify.py` with positional encoding implementation

Issue - State: closed - Opened by keighrim 11 months ago - 3 comments
Labels: :sparkles:N

#27 - decoupling model configs from `classify.py`

Issue - State: closed - Opened by keighrim 11 months ago - 1 comment
Labels: :sparkles:N

#26 - adding positional encoding

Pull Request - State: closed - Opened by keighrim 11 months ago

#25 - Making this a true Clams App

Pull Request - State: closed - Opened by marcverhagen 11 months ago

#24 - Container fragility

Issue - State: closed - Opened by marcverhagen 11 months ago - 5 comments

#23 - Merge main into 14-clams-app

Pull Request - State: closed - Opened by marcverhagen 11 months ago

#22 - fixing error

Pull Request - State: closed - Opened by keighrim 11 months ago

#21 - Failure to get HOSTNAME environment variable

Issue - State: closed - Opened by marcverhagen 12 months ago - 1 comment

#20 - adding gridsearch over all configurable params

Pull Request - State: closed - Opened by keighrim 12 months ago

#19 - Modularized binning

Pull Request - State: closed - Opened by keighrim 12 months ago

#18 - k-fold validation implementation

Pull Request - State: closed - Opened by keighrim 12 months ago

#17 - positional encoding feature

Issue - State: closed - Opened by keighrim 12 months ago

#16 - data ingestion with many backbones

Pull Request - State: closed - Opened by keighrim 12 months ago

#15 - grid search among models and hyperparam values

Issue - State: closed - Opened by keighrim 12 months ago - 1 comment

#14 - implement as a CLAMS app

Issue - State: closed - Opened by keighrim 12 months ago - 8 comments

#13 - modularize category binning

Issue - State: closed - Opened by keighrim 12 months ago

#12 - adding "macro" image-level evaluation and P/R/F by category report

Pull Request - State: closed - Opened by keighrim 12 months ago

#11 - code to train models

Pull Request - State: closed - Opened by keighrim 12 months ago

#10 - refactored resnet extractor

Pull Request - State: closed - Opened by keighrim 12 months ago

#9 - additional vectorization

Issue - State: closed - Opened by keighrim 12 months ago

#8 - initial implementation of feature extraction

Pull Request - State: closed - Opened by keighrim 12 months ago

#7 - evaluation pipeline

Issue - State: closed - Opened by keighrim about 1 year ago - 1 comment

#6 - training pipeline

Issue - State: closed - Opened by keighrim about 1 year ago - 2 comments

#4 - training data generation

Issue - State: open - Opened by keighrim about 1 year ago

#3 - training data ingestion

Issue - State: closed - Opened by keighrim about 1 year ago - 4 comments

#2 - image preprocessing for training

Issue - State: open - Opened by keighrim about 1 year ago - 2 comments

#1 - define SWT

Issue - State: open - Opened by keighrim about 1 year ago - 1 comment