Ecosyste.ms: Issues

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GitHub / clEsperanto/pyclesperanto_prototype issues and pull requests

#340 - multiple way of computing some label measurement

Issue - State: closed - Opened by StRigaud 5 months ago - 5 comments

#338 - mute warnings when showing images using repr_html

Pull Request - State: closed - Opened by haesleinhuepf 9 months ago

#337 - Stitching

Pull Request - State: closed - Opened by haesleinhuepf 9 months ago

#336 - Reduce bia bob suggestions

Pull Request - State: closed - Opened by haesleinhuepf 9 months ago

#335 - deprecated imshow and imread

Pull Request - State: closed - Opened by haesleinhuepf 10 months ago - 1 comment

#334 - removed print statement

Pull Request - State: closed - Opened by thawn 11 months ago - 1 comment

#333 - bounding_box() prints a debug message

Issue - State: closed - Opened by thawn 11 months ago

#332 - POCL BUILD_PROGRAM_FAILURE

Issue - State: closed - Opened by MariusCausemann 11 months ago - 6 comments

#330 - erode_labels also relabels all labels

Issue - State: open - Opened by MariusCausemann about 1 year ago - 2 comments

#329 - Build program failure

Issue - State: open - Opened by somas193 about 1 year ago - 4 comments

#328 - Testtt

Pull Request - State: closed - Opened by haesleinhuepf about 1 year ago - 1 comment

#327 - Extend bia-bob by adding suggestions

Pull Request - State: closed - Opened by haesleinhuepf about 1 year ago - 1 comment

#326 - Meet `MEM_OBJECT_ALLOCATION_FAILURE` with a large medical image

Issue - State: closed - Opened by xiachenrui about 1 year ago - 3 comments

#325 - clij-opencl-kernels

Issue - State: open - Opened by haesleinhuepf about 1 year ago

#324 - naming of functions

Issue - State: open - Opened by haesleinhuepf about 1 year ago

#323 - Get the Contours array from `voronoi_labeling()` function

Issue - State: closed - Opened by xiachenrui about 1 year ago - 2 comments

#322 - Ambiguous call to the convert_uint_sat function

Issue - State: open - Opened by Robin1em about 1 year ago - 4 comments

#321 - AttributeError: module 'numpy' has no attribute 'float'.

Issue - State: open - Opened by lcferme over 1 year ago

#320 - implement the sato filter in pyclesperanto (equivalent of fiji tubeness)

Issue - State: open - Opened by thawn over 1 year ago
Labels: enhancement

#319 - Citing pyclesperanto?

Issue - State: closed - Opened by ajsc4 over 1 year ago - 1 comment

#318 - Convert numpy array to OCLArray?

Issue - State: closed - Opened by ajsc4 over 1 year ago - 1 comment

#316 - median_sphere filter fails on large images

Issue - State: open - Opened by sebherbert over 1 year ago - 6 comments

#314 - implement scaling with anti-aliasing

Issue - State: open - Opened by haesleinhuepf over 1 year ago

#313 - add `cle.average_pooling` function

Issue - State: open - Opened by thawn over 1 year ago

#312 - Skeletonization

Issue - State: open - Opened by haesleinhuepf over 1 year ago

#311 - Updating affine for test.

Pull Request - State: open - Opened by iionichi over 1 year ago

#310 - affine transform debug

Issue - State: open - Opened by iionichi over 1 year ago - 9 comments

#309 - 3D labeling

Issue - State: open - Opened by indrajeettambe over 1 year ago - 5 comments

#308 - More opencl kernels in ARM-software/ComputeLibrary

Issue - State: open - Opened by haesleinhuepf almost 2 years ago

#307 - Canny Edge detection

Issue - State: open - Opened by haesleinhuepf almost 2 years ago - 2 comments

#306 - CLAHE

Issue - State: open - Opened by haesleinhuepf almost 2 years ago - 7 comments

#305 - find_boundaries alias for detect_label_edges

Issue - State: open - Opened by haesleinhuepf almost 2 years ago

#304 - morphological_chan_vese

Pull Request - State: open - Opened by haesleinhuepf almost 2 years ago - 2 comments

#303 - Test inf-sup with morphological snakes

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago

#302 - Read 0 outside image (instead of clamp-to-edge)

Issue - State: open - Opened by haesleinhuepf almost 2 years ago - 1 comment

#301 - Custom read zero outside image

Pull Request - State: open - Opened by haesleinhuepf almost 2 years ago - 1 comment

#300 - opencl support on google colab broken

Issue - State: open - Opened by haesleinhuepf almost 2 years ago - 3 comments

#299 - fix typo in parameter names; backwards compatible

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#298 - package is not on conda-forge

Issue - State: closed - Opened by thawn almost 2 years ago - 3 comments

#297 - Dask demo with GPU cluster

Pull Request - State: closed - Opened by jackyko1991 almost 2 years ago - 1 comment

#296 - Morph snake smoothing

Pull Request - State: open - Opened by grahamross123 almost 2 years ago - 1 comment

#295 - Bugfix range

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago

#293 - bugfix: force kernel size to be integer

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#292 - Mode filters

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#291 - fix issue with enumerate and zip

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#289 - distance between two groups of centroids

Issue - State: open - Opened by jackyko1991 almost 2 years ago

#288 - set to set comparison memory minimisation

Issue - State: open - Opened by allysonryan almost 2 years ago

#287 - non-binary representation in neighbourhood meshes

Issue - State: open - Opened by allysonryan almost 2 years ago - 2 comments

#286 - draw_mean_intensity_between_centroids_mesh

Issue - State: open - Opened by haesleinhuepf almost 2 years ago

#284 - bugfix orthogonal interpolation

Pull Request - State: open - Opened by pr4deepr almost 2 years ago - 4 comments

#283 - initial contributors guide

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#282 - add fill_diagonal alias for set_where_x_equals_y

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#281 - Question regarding contributing and folder structure (not an issue)

Issue - State: closed - Opened by paxcalpt almost 2 years ago - 7 comments

#280 - Some pytests fail

Issue - State: open - Opened by paxcalpt almost 2 years ago - 2 comments

#279 - Create alias `fill_diagonale` for `set_where_x_equals_y`

Issue - State: closed - Opened by haesleinhuepf almost 2 years ago

#278 - Shift in z planes of the deskewed stack

Issue - State: open - Opened by oleksiievetsno almost 2 years ago - 19 comments

#277 - Minimum x, y, and tier3 position

Pull Request - State: closed - Opened by ClementCaporal almost 2 years ago - 1 comment

#276 - Issue with linear interpolation during deskewing

Issue - State: open - Opened by oleksiievetsno almost 2 years ago

#275 - could not find documentation for contributors

Issue - State: closed - Opened by thawn almost 2 years ago - 2 comments

#274 - Tests fail since release of scikit-image 0.20.0

Issue - State: open - Opened by haesleinhuepf almost 2 years ago - 1 comment

#273 - prevent installing skimage 0.20.0

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#272 - x and y **minimum position** projections

Issue - State: closed - Opened by ClementCaporal almost 2 years ago - 2 comments

#271 - I think this link might be broken

Issue - State: closed - Opened by paxcalpt almost 2 years ago - 1 comment

#270 - Default GPU selection

Issue - State: open - Opened by jo-mueller almost 2 years ago - 6 comments

#269 - Generated mesh doesn't correspond to adjacency matrix?

Issue - State: closed - Opened by jo-mueller almost 2 years ago - 5 comments

#268 - Docs update

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#267 - added standard error of the mean to statistics_of_labelled_pixels

Pull Request - State: open - Opened by thawn almost 2 years ago - 4 comments

#266 - x,y,z ?mix? in 3D Image Segmentation demo

Issue - State: closed - Opened by ClementCaporal almost 2 years ago - 2 comments

#265 - standard deviation vs. standard error of the mean

Issue - State: open - Opened by thawn almost 2 years ago - 3 comments

#264 - Min max along points

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#263 - fix imsave

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#262 - bugfix: make .T work + add test

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#261 - bugfix: correct image size, added test

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#260 - enable color bars in subplots

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#259 - Remove local threshold

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#258 - Device selection

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#257 - add generate_average_intensity_between_points_matrix + test

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#256 - bugfix EDF result dimensionality, add test

Pull Request - State: closed - Opened by haesleinhuepf almost 2 years ago - 1 comment

#254 - Warn when different GPU is used than requested

Issue - State: closed - Opened by haesleinhuepf almost 2 years ago

#253 - GPU selection using device index

Issue - State: closed - Opened by haesleinhuepf almost 2 years ago

#252 - Issue with median filter on Ryzen GPU

Issue - State: open - Opened by haesleinhuepf almost 2 years ago

#251 - Remove alias "local_threshold"

Issue - State: closed - Opened by haesleinhuepf almost 2 years ago

#249 - Updated Affine interpolation

Pull Request - State: closed - Opened by iionichi about 2 years ago - 1 comment

#248 - make excluding edges on specific edges optional

Pull Request - State: closed - Opened by haesleinhuepf about 2 years ago

#247 - imshow() method doesn't display colorbar for images in subplots

Issue - State: closed - Opened by somas193 about 2 years ago - 4 comments

#246 - exclude_labels_on_edges should have options for doing it in X, Y and Z

Issue - State: closed - Opened by haesleinhuepf about 2 years ago - 1 comment

#245 - added test np.int64 indexing

Pull Request - State: closed - Opened by haesleinhuepf about 2 years ago - 1 comment

#244 - bugfix for linux

Pull Request - State: closed - Opened by ENicolay about 2 years ago - 1 comment

#243 - Potential issue with astype(int) on Mac M1

Issue - State: open - Opened by haesleinhuepf about 2 years ago - 2 comments

#242 - relax numpy dependency version pin

Pull Request - State: closed - Opened by haesleinhuepf about 2 years ago - 1 comment

#241 - incompatibility with numpy 1.24

Issue - State: closed - Opened by haesleinhuepf about 2 years ago - 1 comment