cjfuller/imageanalysistools issues and pull requests

#59 - Problem getting multiple channels from 8bit r/g/b/ tiff

Issue - State: open - Opened by cjfuller about 11 years ago
Labels: bug, wontfix

#59 - Problem getting multiple channels from 8bit r/g/b/ tiff

Issue - State: open - Opened by cjfuller about 11 years ago
Labels: bug, wontfix

#58 - Write tests

Issue - State: open - Opened by cjfuller almost 12 years ago
Labels: enhancement

#58 - Write tests

Issue - State: open - Opened by cjfuller almost 12 years ago
Labels: enhancement

#57 - Deschmutzerizer no longer runs

Issue - State: closed - Opened by cjfuller almost 12 years ago
Labels: bug

#57 - Deschmutzerizer no longer runs

Issue - State: closed - Opened by cjfuller almost 12 years ago
Labels: bug

#56 - Background subtraction for 3D centromere finding.

Issue - State: open - Opened by cjfuller almost 12 years ago
Labels: enhancement

#56 - Background subtraction for 3D centromere finding.

Issue - State: open - Opened by cjfuller almost 12 years ago
Labels: enhancement

#55 - Background subtraction without requiring clustering

Issue - State: closed - Opened by cjfuller almost 12 years ago
Labels: enhancement

#55 - Background subtraction without requiring clustering

Issue - State: closed - Opened by cjfuller almost 12 years ago
Labels: enhancement

#54 - Quality of 3d centromere finding highly dependent on size of (empty) image surrounding nucleus.

Issue - State: closed - Opened by cjfuller about 12 years ago
Labels: bug

#54 - Quality of 3d centromere finding highly dependent on size of (empty) image surrounding nucleus.

Issue - State: closed - Opened by cjfuller about 12 years ago
Labels: bug

#53 - Process single files by exact filename match

Issue - State: open - Opened by cjfuller about 12 years ago
Labels: bug

#53 - Process single files by exact filename match

Issue - State: open - Opened by cjfuller about 12 years ago
Labels: bug

#52 - QOPartition exception

Issue - State: closed - Opened by cjfuller about 12 years ago
Labels: bug

#52 - QOPartition exception

Issue - State: closed - Opened by cjfuller about 12 years ago
Labels: bug

#51 - Null pointer exception in VoronoiDiagram

Issue - State: open - Opened by cjfuller about 12 years ago - 1 comment
Labels: bug

#51 - Null pointer exception in VoronoiDiagram

Issue - State: open - Opened by cjfuller about 12 years ago - 1 comment
Labels: bug

#50 - Small regions in centromere finding method output

Issue - State: closed - Opened by cjfuller about 12 years ago - 3 comments
Labels: bug

#50 - Small regions in centromere finding method output

Issue - State: closed - Opened by cjfuller about 12 years ago - 3 comments
Labels: bug

#49 - Nondeterministic analysis results

Issue - State: closed - Opened by cjfuller about 12 years ago - 1 comment
Labels: bug

#49 - Nondeterministic analysis results

Issue - State: closed - Opened by cjfuller about 12 years ago - 1 comment
Labels: bug

#48 - Swich to maven for build for better dependency handling

Issue - State: closed - Opened by cjfuller about 12 years ago
Labels: enhancement

#48 - Swich to maven for build for better dependency handling

Issue - State: closed - Opened by cjfuller about 12 years ago
Labels: enhancement

#47 - Incorrectly grouping all dimensions as one in multiplane dv files.

Issue - State: closed - Opened by cjfuller about 12 years ago
Labels: bug

#47 - Incorrectly grouping all dimensions as one in multiplane dv files.

Issue - State: closed - Opened by cjfuller about 12 years ago
Labels: bug

#46 - Occasional incorrect image values out of ImageReader

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#46 - Occasional incorrect image values out of ImageReader

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#45 - running analysis twice causes stall

Issue - State: closed - Opened by whijo2 over 12 years ago - 1 comment
Labels: bug

#45 - running analysis twice causes stall

Issue - State: closed - Opened by whijo2 over 12 years ago - 1 comment
Labels: bug

#44 - Script method rereads ruby scripts from disk

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: bug

#44 - Script method rereads ruby scripts from disk

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: bug

#43 - Script erased on reuse of XML parameter files from ScriptMethod

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#43 - Script erased on reuse of XML parameter files from ScriptMethod

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#42 - Output images from ruby scripts

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#42 - Output images from ruby scripts

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#41 - 8bit image processing issues

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#41 - 8bit image processing issues

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#40 - BandpassFilter Image duplication

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#40 - BandpassFilter Image duplication

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#39 - GaussianFilter image duplication

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#39 - GaussianFilter image duplication

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#38 - Change ParameterDictionary to use Parameter objects

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: enhancement

#38 - Change ParameterDictionary to use Parameter objects

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: enhancement

#37 - Change frontend classes for expanded metadata

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: enhancement

#37 - Change frontend classes for expanded metadata

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: enhancement

#36 - Logs do not appear in batch processing window until analysis completes

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#36 - Logs do not appear in batch processing window until analysis completes

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#35 - Duplication of messages in batch processing window

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#35 - Duplication of messages in batch processing window

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: bug

#34 - Schematize XML parameter file input/output

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#34 - Schematize XML parameter file input/output

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#33 - Expand output analysis metadata

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: enhancement

#33 - Expand output analysis metadata

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: enhancement

#32 - Fix exception behavior when image directory contains subdirectories

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: bug

#32 - Fix exception behavior when image directory contains subdirectories

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: bug

#31 - Dependency changes

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement, wontfix

#31 - Dependency changes

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement, wontfix

#30 - Scripting Documentation

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement

#30 - Scripting Documentation

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement

#29 - Scripting api

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: enhancement

#29 - Scripting api

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: enhancement

#28 - GUI changes for scripting interface

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement, wontfix

#28 - GUI changes for scripting interface

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement, wontfix

#27 - XML Parameter File Flexibility for Scripting Methods

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement

#27 - XML Parameter File Flexibility for Scripting Methods

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement

#26 - Scripting Method

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: enhancement

#26 - Scripting Method

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: enhancement

#25 - Scripting Support

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement

#25 - Scripting Support

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement

#24 - Non-diffraction-limited gaussian fitting

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement

#24 - Non-diffraction-limited gaussian fitting

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement

#23 - Remove omero client jar from dependencies in the plugin

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: enhancement

#23 - Remove omero client jar from dependencies in the plugin

Issue - State: closed - Opened by cjfuller over 12 years ago
Labels: enhancement

#22 - DimensionSwappingFilter with different sized dimensions broken

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: bug

#22 - DimensionSwappingFilter with different sized dimensions broken

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: bug

#21 - Dimension ordering bug in ImagePlusPixelData

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: bug

#21 - Dimension ordering bug in ImagePlusPixelData

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: bug

#20 - Track current location of pointer in deschmutzerizer on normal image

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#20 - Track current location of pointer in deschmutzerizer on normal image

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#19 - Allow arbitrary ROI selection in deschmutzerizer, not just boxes

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#19 - Allow arbitrary ROI selection in deschmutzerizer, not just boxes

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#18 - Change the way in which multi-color images are handled

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#18 - Change the way in which multi-color images are handled

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#17 - Allow addition of external filters and metrics through the GUI

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#17 - Allow addition of external filters and metrics through the GUI

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#16 - Track and add required parameters for methods created in the GUI

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#15 - Add information about filters to the filter selection dialog

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#15 - Add information about filters to the filter selection dialog

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#14 - Merge MetricSelectionFrame and FilterSelectionFrame

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#14 - Merge MetricSelectionFrame and FilterSelectionFrame

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#13 - Problems with LargePixelData

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: bug

#13 - Problems with LargePixelData

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: bug

#12 - Change quantitative output handling

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement

#12 - Change quantitative output handling

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement

#11 - multi_wavelength_file defaults to the incorrect value

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: bug

#11 - multi_wavelength_file defaults to the incorrect value

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: bug

#10 - Standardize how classes say which parameters they use

Issue - State: open - Opened by cjfuller over 12 years ago
Labels: enhancement

#9 - Deschmutzerizer rewrite

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement

#8 - Dynamic method creation through XML files (and GUI creator)

Issue - State: closed - Opened by cjfuller over 12 years ago - 1 comment
Labels: enhancement

GitHub / cjfuller/imageanalysistools issues and pull requests