chriscummins/pip-db issues and pull requests

#350 - Add GPL v3 headers to source files

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Task, Documentation

#349 - Move ghi script into extern/ directory

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Task

#348 - Strip out proprietary and binary format files from repository

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Task

#347 - Remove modernizr library

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Task, Implementation

#346 - search: Click to reveal properties line wrap

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Design

#345 - advanced: Clicking on pI slider grab handles should enable widget

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Design, Feature

#344 - index: Add the ability to search by different categories

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Design, Implementation, Feature

#343 - Add placeholder text to search form inputs

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Design, Feature

#342 - advanced: Search forms don't retain state

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Design

#341 - advanced: No of results indicator doesn't show when out of sync

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Design, Implementation

#340 - upload: Cache a dataset checksum on upload

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#339 - Blast: Support multi-line sequence inputs

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#338 - Blast: Support uploading files

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#337 - Perform upload asynchronously

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#336 - search: Add a "Searching for records where XXX." meta tag

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Design, Feature

#335 - Advanced search page doesn't load pi_l and pi_h URL attributes

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Implementation

#334 - Add an '/api/ping' page

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#333 - download: Remove unwanted columns

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Task, Implementation

#332 - Embed lein commands within autotooled build system

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Feature, Build system

#331 - download: CSV format is tab delimited, not comma separated

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Implementation

#330 - search: pI column should never ellipsize

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Design

#329 - Rename /s URL to /r

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Task, Implementation

#328 - Copyright symbol on 404 page is corrupted

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Design

#327 - search: If there's only 1 result, redirect straight to the record page

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Design, Feature

#326 - Reduce Heroku slug size

Issue - State: closed - Opened by ChrisCummins almost 11 years ago - 1 comment
Labels: Task, Implementation, Build system

#325 - Add a meta table to database

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#324 - results-map: Replace "id" property with "Located-At" property

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#323 - Experiment with MongoDB back-end

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Task

#322 - login: Registration button doesn't hide error messages

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Design

#321 - advanced: EC input fields aren't vertically aligned

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Design

#320 - Incorporate fetch-fasta into csv2yaps

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Task, Testing & tooling

#319 - csv2yaps: Greek letters are capitalised

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Testing & tooling

#318 - search: pI searches with identical low and high values returns no results

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Implementation

#317 - record: "Show other records like this" text causes cells to expand vertically

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Design

#316 - Allocated storage capacity exceeded

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Implementation

#315 - js/main: Refactor stripFormDefaults

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Task, Implementation

#314 - Words autocomplete suggestions are a mess

Issue - State: closed - Opened by ChrisCummins almost 11 years ago - 1 comment
Labels: Bug, Implementation

#313 - Clicking on an autocomplete suggestion doesn't update the search results indicator

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Implementation

#312 - Experimental method selector doesn't cover all possibilities

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Implementation

#311 - Implement an AJAX results count service

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#310 - Implement an AJAX autocomplete service

Issue - State: closed - Opened by ChrisCummins almost 11 years ago - 1 comment
Labels: Implementation, Feature

#309 - Merge MVC namespaces

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Task, Implementation

#308 - search: CSS class selector names are out of date

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Design

#307 - model: Use human readable property names in response map

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Task, Implementation

#306 - csv2yaps: Pretty-print JSON output

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Testing & tooling, Feature

#305 - YAPS: Use human-readable names

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Task, Implementation, Testing & tooling

#304 - Don't escape slashes in JSON response

Issue - State: closed - Opened by ChrisCummins almost 11 years ago - 1 comment
Labels: Task, Implementation

#303 - csv2yaps: Capitalise first letter of Source, Location, and Name entries

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Testing & tooling, Feature

#302 - YAPS: Embed meta-data

Issue - State: closed - Opened by ChrisCummins almost 11 years ago - 1 comment
Labels: Implementation, Testing & tooling, Feature

#301 - record: The "not found" response does not have status 404

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Implementation

#300 - csv2yaps: Quoted cells should have the quotation marks stripped

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Testing & tooling

#299 - Use regular expressions to match route parameters

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Task, Implementation

#298 - YAPS: Use a flat JSON schema

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Task, Implementation, Testing & tooling

#297 - models/search: Use exact matches for record ID query

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#296 - record: Use separate rows for pI records

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Design, Feature

#295 - search: Use a fallback "Search Results" title

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Design, Feature

#294 - record: Add a "See other records like this" hover button

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Design, Feature

#293 - search: Add "sort by" selectors to the headers

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Design, Feature

#292 - upload: Gracefully handle JSON parse errors

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#291 - record: ID matching using closest match

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Implementation

#290 - search: Preserve query string when linking to records

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#289 - search: Implement searching by numerical MW values

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#288 - search: Implement searching by numerical temperature values

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#287 - search: Implement searching by numerical EC values

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#286 - search: Implement searching by numerical PI values

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#285 - download: Table preview contains mis-aligned cells

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Implementation, Regression

#284 - Overhaul data back-end

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Task, Implementation

#283 - Name request handlers after the HTTP method they handle

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Task, Implementation

#282 - Implement CSV to YAPS parser

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Task, Testing & tooling

#281 - record: Citation style selector overlaps header on small displays

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Design

#280 - download: File extensions in download button have double dots

Issue - State: closed - Opened by ChrisCummins almost 11 years ago - 1 comment
Labels: Bug, Implementation

#279 - download: No page title set

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Implementation

#278 - record: Transmit record data in JSON format

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#277 - search: 'id' query parameter has stopped working

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Implementation, Regression

#276 - search: If record has no pI value, results table shows "undefined"

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Implementation

#275 - Rip out unused Bootstrap styles

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Task, Design

#272 - search: Transmit results data in JSON format

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#269 - advanced: Add label to PI slider showing selected values

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Task, Design, Implementation, Feature

#268 - advanced: Decrese pI slider step size to 0.1 increments

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Task, Design, Implementation

#266 - Add the ability to return data in XML/JSON formats

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#265 - Implement upload preview

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Task, Implementation, Feature

#258 - Unhandled exception when address is in use

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Implementation

#257 - Unhandled exception when PSQL connection is refused

Issue - State: open - Opened by ChrisCummins almost 11 years ago
Labels: Bug, Implementation

#256 - Implement record citation styles

Issue - State: closed - Opened by ChrisCummins almost 11 years ago
Labels: Implementation, Feature

#249 - Send Darren a compiled list of experimental methods

Issue - State: closed - Opened by ChrisCummins almost 11 years ago - 1 comment
Labels: Task

#243 - Incorporate NCBI BLAST searches

Issue - State: closed - Opened by ChrisCummins almost 11 years ago - 2 comments
Labels: Implementation, Feature

#221 - pipbot: Branching fails if there's no internet connection

Issue - State: open - Opened by ChrisCummins about 11 years ago
Labels: Bug, Testing & tooling

#220 - Design an object-orientated Pipbot

Issue - State: closed - Opened by ChrisCummins about 11 years ago - 1 comment
Labels: Task, Testing & tooling, Wontfix

#219 - pipbot: Spawn a subshell for each command in REPL

Issue - State: open - Opened by ChrisCummins about 11 years ago
Labels: Testing & tooling, Feature

#213 - Use pseudo-random URLs instead of numerical record IDs

Issue - State: closed - Opened by ChrisCummins about 11 years ago
Labels: Implementation, Feature

#212 - OpenUP Iteration 2 Roadmap

Issue - State: closed - Opened by ChrisCummins about 11 years ago
Labels: Planning

#205 - Make project log machine parsable

Issue - State: open - Opened by ChrisCummins about 11 years ago
Labels: Feature, Documentation

#202 - pipbot: Cache the last-used configuration

Issue - State: closed - Opened by ChrisCummins about 11 years ago - 2 comments
Labels: Testing & tooling, Feature, Wontfix

#201 - pipbot: Cache a checksum of configure.ac

Issue - State: closed - Opened by ChrisCummins about 11 years ago - 2 comments
Labels: Testing & tooling, Feature, Wontfix

#200 - Document pipbot

Issue - State: open - Opened by ChrisCummins about 11 years ago
Labels: Testing & tooling, Documentation

#199 - pipbot: Refactor os.system() calls to use Suprocess API

Issue - State: open - Opened by ChrisCummins about 11 years ago
Labels: Testing & tooling, Feature

#198 - pipbot: Add a 'log' command

Issue - State: closed - Opened by ChrisCummins about 11 years ago - 2 comments
Labels: Testing & tooling, Feature, Wontfix

#167 - Site Optimisation checklist

Issue - State: open - Opened by ChrisCummins about 11 years ago
Labels: Task

#158 - Research XML Schemas for protein data

Issue - State: closed - Opened by ChrisCummins about 11 years ago - 2 comments
Labels: Task, Planning

#142 - Add a site map

Issue - State: open - Opened by ChrisCummins about 11 years ago
Labels: Task

GitHub / chriscummins/pip-db issues and pull requests